prot_Ecto-sp13_S_contig7985.19285.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7985.19285.1
Unique Nameprot_Ecto-sp13_S_contig7985.19285.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length347
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7985.19285.1 vs. uniprot
Match: D7FY80_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY80_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 2.740e-165
Identity = 266/303 (87.79%), Postives = 272/303 (89.77%), Query Frame = 0 
Query:   44 MGRMAVANAKTAPLKPRCRKVGARCRFEGCTGRPWFAKPGSRVPRACKAHKDEGEVNVYAPACEADGCMTRPHYGVDGGRARFXXKHKLDWMVDVLNKRCAMKGCRRQPSWARERGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGAVATTKSQPSEENTETAGXXXXXTAAAHPGPARYCAAHAPAGATNVTASLCRHPGGCSVQPYFGREGGGQQPEFCALHRKPGMTDVRNPRCAAVGCTAQPRCGREGDPRPSFCLRHAAPDMINFRSAGYRDRGKAPPPKRKKLAKSSSAPSR 346
            MGRMAVANAKTAP KPRCRKVGARCRFEGCTGRPWFA+PGSRVPRACKAHK+EGEVNVYAPACEAD C TRPHYG DGGRARFXXKHKLD MVDVLNKRCA KGCRRQPSWARER  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGAVATTKSQPSE+NTET       TAAAHPGPARYCAAHAPAGATNVTAS CRHPGGCSVQPYFGREGGGQQP+FCALHRKPGMTDVRNPRC AVGCTAQPRCGREGDPR           M+NFRSAGYRDRGKA  PKR+KLA SSSAPSR
Sbjct:    1 MGRMAVANAKTAPSKPRCRKVGARCRFEGCTGRPWFAQPGSRVPRACKAHKEEGEVNVYAPACEADACTTRPHYGADGGRARFXXKHKLDGMVDVLNKRCAKKGCRRQPSWARERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGAVATTKSQPSEDNTETTAGGAAATAAAHPGPARYCAAHAPAGATNVTASRCRHPGGCSVQPYFGREGGGQQPKFCALHRKPGMTDVRNPRCTAVGCTAQPRCGREGDPRXXXXXXXXXXXMVNFRSAGYRDRGKATTPKRRKLAISSSAPSR 303
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7985.19285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY80_ECTSI2.740e-16587.79EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY80... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7985contigEcto-sp13_S_contig7985:1956..5266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7985.19285.1mRNA_Ecto-sp13_S_contig7985.19285.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7985 1956..5901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7985.19285.1 ID=prot_Ecto-sp13_S_contig7985.19285.1|Name=mRNA_Ecto-sp13_S_contig7985.19285.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=347bp
MARKEMTTWTSPIQPQMQQQQQQQQQQQPEPPPFPVKNGFLKGMGRMAVA
NAKTAPLKPRCRKVGARCRFEGCTGRPWFAKPGSRVPRACKAHKDEGEVN
VYAPACEADGCMTRPHYGVDGGRARFCCKHKLDWMVDVLNKRCAMKGCRR
QPSWARERGARALFCKEHKEDGMVDTKHKTCLHPGCTRFPSKSGAVATTK
SQPSEENTETAGGGGAATAAAHPGPARYCAAHAPAGATNVTASLCRHPGG
CSVQPYFGREGGGQQPEFCALHRKPGMTDVRNPRCAAVGCTAQPRCGREG
DPRPSFCLRHAAPDMINFRSAGYRDRGKAPPPKRKKLAKSSSAPSR*
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