prot_Ecto-sp13_S_contig7982.19283.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7982.19283.1
Unique Nameprot_Ecto-sp13_S_contig7982.19283.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length825
Homology
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: D8LRF8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF8_ECTSI)

HSP 1 Score: 936 bits (2420), Expect = 0.000e+0
Identity = 580/656 (88.41%), Postives = 599/656 (91.31%), Query Frame = 0
Query:  108 MTVSTAAQLASLVESTNCSDGAFVVSWQGGLTLSEPVVVGNSTTLSIEGVGDGAILDGGGGSRLFQVSGGASLFLENLDLRNASAPYYSGGGAIYADGEDVSLLVSSCNFTGNRAPLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGLNSGWDDSDDGFGGAVGLSGGTPQLAFHECELRHNNATDDGGAVYSDSGASITVNSTLLDGNWAGGYGGGVYANGGVAQVDVLDSVFTGNFASDMASWSSSVFHAGGALYVIGQAAVSIKSSTFSGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNARGGGIMINNEGPFDVNFTDTVFLDNWSGGNGGGLWAFLTAGELTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGNGEMAVQAEGCHLEGNKADAQGGGMAVDGGVLRAAGCGFSGNVAGRGGAIAAAGEDDDSAAVVFVSGGYMRGNSAELVAWNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGFGGGVSLSAGSAVFATGGTNFTSNVAEIGGGAVNAWGSGSSFWASEGCGFAGNVAGGAXXXXXXXXXXXXXSSGDSYSPTVDPGGPAGGAIYVTNGGAVSVLDSTLSGNSAHGRGGGLYCAGDANVTVARAGFVGHESG 763
            MTVSTAAQLA+LVESTNCSDGAFVVSWQG LTLSEPVVVGNSTTLSIEGVGDG++LDGGGGSRLFQVSGGASLFL+NL+LRN SAPYY+GGGAIYADGE VSLLVSSCNFT NRAPL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEG NS WD+ D G GGAVGLSGGTPQLAFHECELRHNNAT  GGAVYSD+GAS+T+NSTLLDGNWAG  GGGV+  G VAQVDVLDSVFTGNFASD ASWSSS+ H GGALYV GQAAVSIKSS+F+GNGAEG XXXXXXXXXXXXXXXXXXXXXLGNA+GGGIMI NEGPFDVNFTDT F DNWSGGNG GLWAFLTAG LTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSG+GEMAVQAE CHLEGN+A AQGGGMA+DGGVLRAAGCGFSGNVAGRGGAIAAAGEDDDSAAVVFV GG+MRGNSAEL AW LWYGYGGGLFAQDGAQAVLDGVALDGNSAGFGGGVSLSAGSAV ATGGTNFTSNVAEIGGGAVNAWGS                    XXXXXXXXXXX  SSGDSYSPTVDPGGPAGGAIYVTNGGAVSVLDSTLS NSAHGRGGGLYCAGDANVTVARAGF GHESG
Sbjct:    1 MTVSTAAQLATLVESTNCSDGAFVVSWQGALTLSEPVVVGNSTTLSIEGVGDGSVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGGAIYADGEHVSLLVSSCNFTANRAPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGPNSAWDNFDVGVGGAVGLSGGTPQLAFHECELRHNNATSYGGAVYSDAGASVTMNSTLLDGNWAGEDGGGVHVKGDVAQVDVLDSVFTGNFASDSASWSSSLSHVGGALYVFGQAAVSIKSSSFTGNGAEGXXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIINEGPFDVNFTDTAFSDNWSGGNGAGLWAFLTAGNLTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGDGEMAVQAEDCHLEGNEAGAQGGGMAIDGGVLRAAGCGFSGNVAGRGGAIAAAGEDDDSAAVVFVRGGFMRGNSAELGAWGLWYGYGGGLFAQDGAQAVLDGVALDGNSAGFGGGVSLSAGSAVSATGGTNFTSNVAEIGGGAVNAWGSXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXSDSSGDSYSPTVDPGGPAGGAIYVTNGGAVSVLDSTLSENSAHGRGGGLYCAGDANVTVARAGFAGHESG 655          
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: A0A6H5JUM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM3_9PHAE)

HSP 1 Score: 757 bits (1955), Expect = 1.550e-258
Identity = 454/585 (77.61%), Postives = 476/585 (81.37%), Query Frame = 0
Query:  264 AVTARKTLFLANVAEGLNSGWDDSDDGFGGAVGLSGGTPQLAFHECELRHNNATDDGGAVYSDSGASITVNSTLLDGNWAGGYGGGVYANGGVAQVDVLDSVFTGNFASDMASWSSSVFHAGGALYVIGQAAVSIKSSTFSGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNARGGGIMINNEGPFDVNFTDTVFLDNWSGGNGGGLWAFLTAGELTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGNGEMAVQAEGCHLEGNKADAQGGGMAVDGGVLRAAGCGFSGNVAGRGGAIAAAGEDDDSAAVVFVSGGYMRGNSAELVAWNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGFGGGVSLSAGSAVFATGGTNFTSNVAEIGGGAVNAWGSGSSFWASEGCGFAGNVAGGAXXXXXXXXXXXXXSSGDSYSPTVDPGGPAGGAIYVTNGGAVSVLDSTLSG-------NSAHGRGGGLYCAGD-ANVTVARAGFVGHESGQXXX-IHCF---------------------------ECALWAVNSTFEGNTATGDGGGMTVSSASTANINFCDFIDN 812
            AVTA+KTLFL+NVAEG NSGWDD D G GGAVGLSGGTPQ+AFHECELR NNATD+GGAVYSDSGASITV STLLDGNWAGGYGGGVYANGGVAQVDVLDSVFTGNFASDMASWSSSV HAGGALY++GQAAVSIKSS+F+GNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNA+GGGIMI NEGPFDVNFTDTV  DNWSGGNGGGLWAFL AG L LLRTNFSNNAVAYREGFFDVP SHRGGGVWVSGNGEM VQAEGCHLEGN+ADAQGGGMAVDGGVLRAA CGFSGNVAGRGGAIAA         VVFVSGGYMRGNSAEL++WNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGFGGG SLSAGSAV ATGGT+FTSNVAEIGGGAVN WGSGSSFWASEGCGF GNVAGGAXXXXXXXXXX   SSGDSYSPTVDPGGPAGGAIYVTNGGAV+   S L+        N A G   G+Y  G+   V V  + F G+ + +    +  F                           ECALWAVNS             MTVSS STANINFC FIDN
Sbjct:    7 AVTAQKTLFLSNVAEGPNSGWDDFDVGVGGAVGLSGGTPQVAFHECELRRNNATDNGGAVYSDSGASITVTSTLLDGNWAGGYGGGVYANGGVAQVDVLDSVFTGNFASDMASWSSSVSHAGGALYIVGQAAVSIKSSSFTGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIINEGPFDVNFTDTVLSDNWSGGNGGGLWAFLNAGNLILLRTNFSNNAVAYREGFFDVPGSHRGGGVWVSGNGEMTVQAEGCHLEGNEADAQGGGMAVDGGVLRAADCGFSGNVAGRGGAIAAXXXXXXXXXVVFVSGGYMRGNSAELISWNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGFGGGGSLSAGSAVSATGGTSFTSNVAEIGGGAVNTWGSGSSFWASEGCGFTGNVAGGAXXXXXXXXXXSD-SSGDSYSPTVDPGGPAGGAIYVTNGGAVAENGSDLTAAGCAFADNQAGGXXXGVYGTGEETRVIVESSSFTGNAAEKVGGGLRAFLLGVLRTXXXXXXXXXXXXXXXXXXXXECALWAVNSXXXXXXXXXXXXXMTVSSTSTANINFCHFIDN 590          
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: A0A6H5JWU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU3_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.070e-61
Identity = 108/117 (92.31%), Postives = 115/117 (98.29%), Query Frame = 0
Query:  108 MTVSTAAQLASLVESTNCSDGAFVVSWQGGLTLSEPVVVGNSTTLSIEGVGDGAILDGGGGSRLFQVSGGASLFLENLDLRNASAPYYSGGGAIYADGEDVSLLVSSCNFTGNRAPL 224
            M VSTAAQLA+LVE+TNCS+GAFVVSWQG LTLSEPV+VGNSTTLS+EGVGDGA+LDGGGGSRLFQVSGGASLFLENL+LRNASAPYYSGGGAIYADGEDVSLLVSSCNFTGNRAPL
Sbjct:    1 MNVSTAAQLATLVENTNCSNGAFVVSWQGALTLSEPVLVGNSTTLSVEGVGDGAVLDGGGGSRLFQVSGGASLFLENLELRNASAPYYSGGGAIYADGEDVSLLVSSCNFTGNRAPL 117          
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.710e-18
Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
Query:  760 HESGQXXXIHCFECALWAVNSTFEGNTATGDGGGMTVSSASTANINFCDFIDN----LGPKGVVVVVRCD 825
            H   Q   IHCFECALWAV+STFEGNTATGDGGGMTVSSASTANINFC FIDN    +G   V   +RCD
Sbjct:   19 HAGEQGGGIHCFECALWAVHSTFEGNTATGDGGGMTVSSASTANINFCHFIDNSVLQVGESVVFAAMRCD 88          
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.410e-7
Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 0
Query:  119 LVESTNCSDGAFVVSWQGGLTLSEPVVVGNSTTLSIEGVG---DGAILDGGGGSRLFQVSGGASLFLENLDLRNASAPY--YSGGGAIYADGEDVSLLVSSCNFTGNR 221
            L E+T C      V W+G + L+EP++VGN T+L I+GVG   D A + G   +++  V  GAS+ L +L+LR+  A     SG G       D  LLV +C F  NR
Sbjct:   40 LTEATVCPGQNITVKWRGFVGLTEPIIVGNGTSLVIDGVGTESDPAAISGQNKTQVLHVQKGASVTLRHLELRDGRAMVDGISGEGGAVRVFRDGQLLVEACQFRLNR 147          
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: A0A835Z719_9STRA (UCH domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z719_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 8.080e-7
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  119 LVESTNCSDGAFVVSWQGGLTLSEPVVVGNSTTLSIEGVG---DGAILDGGGGSRLFQVSGGASLFLENLDLR--NASAPYYSGGGAIYADGEDVSLLVSSCNFTGNR 221
            L E+T C      V W+G + L+EP++VGN T+L I+GVG   D A + G   +++  V  GAS+ L +L+LR   A     SG G       D  LLV +C F  NR
Sbjct:   40 LTEATVCPGQNITVKWRGFVGLTEPIIVGNGTSLVIDGVGTESDPAAISGQNKTQVLHVQKGASVTLRHLELRVGRAMVDGISGEGGAVRVFRDGQLLVEACQFRLNR 147          
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: A0A271J9V9_9BACT (Uncharacterized protein n=2 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A271J9V9_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 3.520e-6
Identity = 137/461 (29.72%), Postives = 188/461 (40.78%), Query Frame = 0
Query:  172 FQVSGGASLFLENLDLRN---ASAPYYSGGGAIYADGEDVSLLVSSCNFTGNRAPLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGLNSGWDDSDD------GFGGAVGLSGGTPQLAFHECELRHNNATDDGGAVYSDSGASITVNSTLLDGNWAGGY--------GGGVYANGGVAQVDVLDSVFTGNFASDM------------------------ASWSSSVFHAGGALYVIGQAAVSIKSSTFSGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNARGGGIMINNEGPFDV---NFTDTVFLDNWSGGNGGGLWAFLTAGELTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGNGEMAVQAEGCHLEGNKADAQGGGMAVDGGVLRAAGCGFSGNVAGRGGAIAAAGEDDDSAAVVFVSGGYMRGNSA 588
            F +S   +L L  + L       A    GGG +Y DG   +L V+   FTGNRA                   XXXXXXXXXXXXXXXXXXX X A  +   + +   AE   SG + SD+      G GGAV L+ GT  LA        N A + GGA++  +GA++T + ++   N A G         GG VY  GG   VD+ +S+FT N A                           + ++      GGA+ V+G+AAV+I +S F  N A+ +                           GG ++   G   V       +    N+S   GGGL+AF   G L +  +  S+N    R        S   GG  + G  ++ ++     + GN A   GGG+    G L        GN A RGG + A G    SA    V G  +  N A
Sbjct:  299 FWISSDGTLSLSGVTLDGNIAEGAGTDQGGGGVYVDGG--TLTVTDAMFTGNRAT-------------GASASXXXXXXXXXXXXXXXXXXXLXRAQRSGGAIEVMGGAEVGISGAEFSDNDAAPSPGDGGAVHLADGTLTLA--STTFSRNYARNQGGALWVAAGATLTDHGSVFSENTARGLARQTPFLCGGAVYVGGGT--VDLTESMFTSNRAHTCRXXXXXXXXXXXXXXXXXXXXXXXSGYADDSQVDGGAIAVVGEAAVTISTSEFIDNQAQSS---------------------------GGAIVALRGFSSVAPLTIEGSAVTGNFSVFGGGGLYAF--GGTLEISTSVLSDNRTGLR-------GSQDAGGALLLGRSDVTIRES--LIWGNSATGNGGGIDASDGSLSILNTTIHGNTALRGGGLFALG----SANFALVEGSTLTDNQA 698          
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Match: A0A836CDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.380e-5
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 0
Query:  119 LVESTNCSDGAFVVSWQGGLTLSEPVVVGNSTTLSIEGVG---DGAILDGGGGSRLFQVSGGASLFLENLDLRNASAPYYSGGGAIYADGEDVSLLVSSCNFTGNRA 222
            L E+  C D    V W+G + ++EP++VG+ TTL I G G   + A + G   ++L +V  GAS+ L+ L LR+        GGAI+ DG+      S+  F  N A
Sbjct:   45 LTEAAACRDQNITVQWRGFVNVTEPIIVGDGTTLVINGWGADSEPAAISGQHATQLLRVQNGASVTLQELRLRDGFVEAGGDGGAIFNDGD---FTCSNSTFAINTA 148          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7982.19283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LRF8_ECTSI0.000e+088.41Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JUM3_9PHAE1.550e-25877.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWU3_9PHAE1.070e-6192.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRF7_ECTSI1.710e-1871.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CF41_9STRA4.410e-738.89Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z719_9STRA8.080e-738.89UCH domain-containing protein n=2 Tax=Tribonema mi... [more]
A0A271J9V9_9BACT3.520e-629.72Uncharacterized protein n=2 Tax=Bacteroidetes/Chlo... [more]
A0A836CDQ4_9STRA1.380e-535.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 777..798
e-value: 130.0
score: 11.4
coord: 521..542
e-value: 1700.0
score: 5.6
coord: 240..261
e-value: 7100.0
score: 1.2
coord: 207..233
e-value: 8900.0
score: 0.4
coord: 476..513
e-value: 3000.0
score: 3.8
coord: 725..746
e-value: 1300.0
score: 6.4
coord: 328..354
e-value: 5900.0
score: 1.7
coord: 419..445
e-value: 1100.0
score: 7.0
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 215..237
e-value: 7.4E-4
score: 17.3
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 369..731
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 369..731
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 45..358
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 45..358
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 703..814
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 142..494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7982contigEcto-sp13_S_contig7982:109..6857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7982.19283.1mRNA_Ecto-sp13_S_contig7982.19283.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7982 109..6857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7982.19283.1 ID=prot_Ecto-sp13_S_contig7982.19283.1|Name=mRNA_Ecto-sp13_S_contig7982.19283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=825bp
RHSIEAKSTRRMFMGTTEVALSSCGRSTTRRAKVRPRSPPSSCCSSSSIS
SSISNRGVTSTLGIATTTTTTTTASVLLMSLAVFAGRFSSSFAQQAAPPA
CSPASAEMTVSTAAQLASLVESTNCSDGAFVVSWQGGLTLSEPVVVGNST
TLSIEGVGDGAILDGGGGSRLFQVSGGASLFLENLDLRNASAPYYSGGGA
IYADGEDVSLLVSSCNFTGNRAPLHGGAILSTGAGSIIALNDCRFEGNTA
EHQGGAVMAISASAVTARKTLFLANVAEGLNSGWDDSDDGFGGAVGLSGG
TPQLAFHECELRHNNATDDGGAVYSDSGASITVNSTLLDGNWAGGYGGGV
YANGGVAQVDVLDSVFTGNFASDMASWSSSVFHAGGALYVIGQAAVSIKS
STFSGNGAEGAGAAYFDGSNSISVEGSSFVGNLGNARGGGIMINNEGPFD
VNFTDTVFLDNWSGGNGGGLWAFLTAGELTLLRTNFSNNAVAYREGFFDV
PNSHRGGGVWVSGNGEMAVQAEGCHLEGNKADAQGGGMAVDGGVLRAAGC
GFSGNVAGRGGAIAAAGEDDDSAAVVFVSGGYMRGNSAELVAWNLWYGYG
GGLFAQDGAQAVLDGVALDGNSAGFGGGVSLSAGSAVFATGGTNFTSNVA
EIGGGAVNAWGSGSSFWASEGCGFAGNVAGGAAAAAARSTSSGSDSSGDS
YSPTVDPGGPAGGAIYVTNGGAVSVLDSTLSGNSAHGRGGGLYCAGDANV
TVARAGFVGHESGQGGGIHCFECALWAVNSTFEGNTATGDGGGMTVSSAS
TANINFCDFIDNLGPKGVVVVVRCD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence