prot_Ecto-sp13_S_contig7976.19277.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7976.19277.1
Unique Nameprot_Ecto-sp13_S_contig7976.19277.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length169
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7976.19277.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 8.500e-73
Identity = 112/141 (79.43%), Postives = 116/141 (82.27%), Query Frame = 0 
Query:   30 MVGQLCRCHTLILXXXXXXXXXXXXXXXXEHGRYTSPLETSESPPSIAMDD-GAAAGVGQRETNRCSDLDQSVFSTGMQCGPPLSPPCFQFNSTECLGNAGIYVFDSECSLLETRELRVPDEGQKVSWAWMDHHYVEWVLR 169
            MVGQLCRCHTL+L                EHGRY+SPLET ESPPS+A+DD GAAAGVG  ETNRCSDLDQS FS GMQCGPPLSPPCFQ NSTECLGNAGIYVFDSECSLLET ELRVPDE QKVSWAWMDHHYVEWVLR
Sbjct:    1 MVGQLCRCHTLVLLLLNAAAASEGGMQRQEHGRYSSPLETLESPPSVALDDDGAAAGVGHPETNRCSDLDQSAFSIGMQCGPPLSPPCFQCNSTECLGNAGIYVFDSECSLLETSELRVPDEEQKVSWAWMDHHYVEWVLR 141
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BLAST of mRNA_Ecto-sp13_S_contig7976.19277.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.210e-31
Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 0 
Query:   30 MVGQLCRCHTLILXXXXXXXXXXXXXXXXEHGRYTSPLETSE--SPPSIAMDDGAAAGVGQRETNRCSDLDQSVFSTGMQCGPPLSPPCFQFNSTECLGNAGIYVFDSECSLLETRELRVPDEGQKVS 155
            MVG LC    ++L                +HGR+   L+T    SPPS+A++ GA   VG+ + NRCSDLDQSVFSTGMQCGPPLSPPCFQ  STECL N GIYVFD ECSL ++ EL   D+G + S
Sbjct:    1 MVGLLCCSLAILLTAGAASSAVGTKQQHQQHGRH---LQTGSLASPPSLAVE-GADPWVGRPQANRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGGIYVFDGECSLQDSSELLAADQGYEFS 124
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BLAST of mRNA_Ecto-sp13_S_contig7976.19277.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 6.740e-13
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:  125 LGNAGIYVFDSECSLLETRELRVPDEGQKVSWAWMDHHYVEWVLR 169
            +GNAGIYVFDSECSLLET +LR  DEG+KVS   M HHYVEWVLR
Sbjct:    1 MGNAGIYVFDSECSLLETSKLRAQDEGKKVSSTRMHHHYVEWVLR 45
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7976.19277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGQ8_9PHAE8.500e-7379.43GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KKV6_9PHAE1.210e-3153.13GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI6.740e-1377.78Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7976contigEcto-sp13_S_contig7976:5333..5839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7976.19277.1mRNA_Ecto-sp13_S_contig7976.19277.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7976 5333..5841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7976.19277.1 ID=prot_Ecto-sp13_S_contig7976.19277.1|Name=mRNA_Ecto-sp13_S_contig7976.19277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=169bp
LQQNPPPDSTAQIDSRHTRKRTAALPHVEMVGQLCRCHTLILLLLSAAAA
SDGGTQQQEHGRYTSPLETSESPPSIAMDDGAAAGVGQRETNRCSDLDQS
VFSTGMQCGPPLSPPCFQFNSTECLGNAGIYVFDSECSLLETRELRVPDE
GQKVSWAWMDHHYVEWVLR
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