prot_Ecto-sp13_S_contig7969.19268.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7969.19268.1
Unique Nameprot_Ecto-sp13_S_contig7969.19268.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length424
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7969.19268.1 vs. uniprot
Match: D7G0L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L3_ECTSI)

HSP 1 Score: 560 bits (1443), Expect = 1.880e-195
Identity = 385/420 (91.67%), Postives = 389/420 (92.62%), Query Frame = 0 
Query:    1 MKSRGGLALGVVIASTLCCGGRGFHQPGVSRIQQXXXXXXXXTFPTGRSNSAGTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HTRRGATGGFGRQNTLIKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFMLPPSQTRSSXXXXXXDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKSDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKTLDWLYSLPPALQAGQEGAVGGVEERGGAGDEAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKV 417
            MKSRGGLALGVVIASTLCCGG+GFHQPGV+RIQQXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   H  RGATGGFGRQNTLIKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDF+LPPSQTRSS XXXX DDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEK+DKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDK LDWLYSLPPALQAGQEGA G VEERG AGDEAVS      XXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKV
Sbjct:    1 MKSRGGLALGVVIASTLCCGGKGFHQPGVTRIQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPGRGATGGFGRQNTLIKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKALDWLYSLPPALQAGQEGAEGSVEERGAAGDEAVSTAAIVNXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKV 420
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BLAST of mRNA_Ecto-sp13_S_contig7969.19268.1 vs. uniprot
Match: A0A6H5JGJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ1_9PHAE)

HSP 1 Score: 529 bits (1363), Expect = 5.230e-181
Identity = 378/449 (84.19%), Postives = 385/449 (85.75%), Query Frame = 0 
Query:    1 MKSRGGLALGVVIASTLCCGGRGFHQPGVSRIQQXXXXXXXXTFPTGRSNSAGTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTRRGATGGFGRQNTLIKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLD--------------------------------KVLDFCSGGCSDFGRTVTLQHYHPDFMLPPSQTRSSXXXXXXDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKSDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKTLDWLYSLPPALQAGQEGAVGGVEERGGAGDEAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKV 417
            MKSRGGLALGVVIASTLCCGGRGFHQPGVSRIQQXXXXXXXX                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH RRGATGGFGRQNTLIKQAVEAWA+ESLDLRRFQGKRVHICKAETLPEVLSEFWSLA+MMAQEKYSAMAGD DYAAHALFVAPRCALLK+YAMMRHLD                                KVLDFCSGGCSDFGRTVTLQHYHPDF+LPPSQTRSS XXXX DDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEK+DKIGHLRLDLELVYNSVAGRSTDDCVDS G   G IPSS EEVQDKTLDWLYSLPPAL+AGQEGAVGGVEERG AGDEAVS  XXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEK+
Sbjct:    1 MKSRGGLALGVVIASTLCCGGRGFHQPGVSRIQQXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRRGATGGFGRQNTLIKQAVEAWAEESLDLRRFQGKRVHICKAETLPEVLSEFWSLAAMMAQEKYSAMAGDHDYAAHALFVAPRCALLKNYAMMRHLDPSLSEEIGTCFFIASSPEGLKAKTSRFVFARDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSGGGGRGGIPSSLEEVQDKTLDWLYSLPPALRAGQEGAVGGVEERGAAGDEAVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKL 440
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7969.19268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0L3_ECTSI1.880e-19591.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGJ1_9PHAE5.230e-18184.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..423
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.546

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7969contigEcto-sp13_S_contig7969:1528..6818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7969.19268.1mRNA_Ecto-sp13_S_contig7969.19268.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7969 1528..7093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7969.19268.1 ID=prot_Ecto-sp13_S_contig7969.19268.1|Name=mRNA_Ecto-sp13_S_contig7969.19268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=424bp
MKSRGGLALGVVIASTLCCGGRGFHQPGVSRIQQQQRRSSAATFPTGRSN
SAGTRGRRRAGGGSLRAKPADPPSSSAAPGKDKEDEEQRKKSSGSSGSGD
DDKLRRRHTRRGATGGFGRQNTLIKQAVEAWADESLDLRRFQGKRVHICK
AETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYA
MMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFMLPPSQTRSSSAAAAVDD
NNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKSDKIGHLRLDLELV
YNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKTLDWLYSLPPALQAGQE
GAVGGVEERGGAGDEAVSTTAFVKEEEKEAGRRGGGASNGRGGSSSSLTS
SYEGGLVTSGLNSPEKVGFYVCR*
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