mRNA_Ecto-sp13_S_contig7968.19267.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: A0A6H5JYM5_9PHAE (MEP15 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM5_9PHAE) HSP 1 Score: 696 bits (1795), Expect = 9.710e-249 Identity = 371/467 (79.44%), Postives = 385/467 (82.44%), Query Frame = 1
Query: 1 RTSPTISYNDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDE-----------------------------DKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQ---FAFYI----------FKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVF 1275
+TSPTISY+DGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDE DKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYD DPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAK+DMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKD+SNLDIFDDDNGLNVGVTGDIY SDLHHNWFGHYSWGHDGGKWQYNTVHDN+GYGFDPHDDSDKLKI+GNEVYNNGWHGII + XXXXXXXX XXXXXXXX ETSDSKVYKNTLENNK+GVRWSNGAN+NRVW+NDIVVEA+Q FAFY+ KGTDPQEAEGNEDGRIRDNSVY+N IWSDQD+VWKATEAEDNVFW F
Sbjct: 17 KTSPTISYDDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEVWKGTSVTLGVAFPKGELLIMFFLTTNLQDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDTDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKEDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDNSNLDIFDDDNGLNVGVTGDIYDSDLHHNWFGHYSWGHDGGKWQYNTVHDNYGYGFDPHDDSDKLKIVGNEVYNNGWHGIIYT------YGLLRMVXXXXXXXXMLHRSCDRANVRENYAXXXXXXXXALFETSDSKVYKNTLENNKYGVRWSNGANNNRVWKNDIVVEADQGGDFAFYMCEFAQTDGETVKGTDPQEAEGNEDGRIRDNSVYRNNIWSDQDMVWKATEAEDNVFWVRSF 477
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FWK3_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK3_ECTSI) HSP 1 Score: 670 bits (1729), Expect = 2.650e-239 Identity = 336/428 (78.50%), Postives = 347/428 (81.07%), Query Frame = 1
Query: 1 RTSPTISYNDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQ---FAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVF 1275
+TSP ISY+DGALHVQGGCATI DLIEYRTNDGKQIGPIFHFDE+KKWYTDTYTGTYYLESDVFITNGATLSIDGSESE+NECE+LLLASNSSTFNRITAHGGNLDIRYTKIFSWDL+NEDYD +PSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIY SDLHHNWFGHYSWGHDGGKWQYNTVHDN+GYGFDPHDDSDKL+IIGNEVYNNGWHGI GVRWSNGAN NRVW NDIVVEA+Q FA Y+FKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFW F
Sbjct: 79 QTSPKISYDDGALHVQGGCATIHDLIEYRTNDGKQIGPIFHFDEEKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEKNECESLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLENEDYDTEPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYRSDLHHNWFGHYSWGHDGGKWQYNTVHDNYGYGFDPHDDSDKLRIIGNEVYNNGWHGI-------------------------------------------------------------------NGVRWSNGANGNRVWMNDIVVEADQGADFALYMFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWVRSF 439
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE) HSP 1 Score: 395 bits (1016), Expect = 1.590e-127 Identity = 267/485 (55.05%), Postives = 333/485 (68.66%), Query Frame = 1
Query: 4 TSPTISYNDGA--LHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASN-----SSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSS-----SNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNV----GVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVV---EANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDG-WEFETDGESCFREGTD 1398
++P IS+ + + L++ GGCAT+ D+ E R+++ GP+++FD++ ++TYTG YYL+S++ I NGATL IDG+ + CETLL+A N S + N I AHGGNL +R TKIFSWD+ YD + +GR YLSA+TE ITGR +D CP D+ + S GQAK+ MG A MDI+ SE+ YLGY SE+YGISYKARGLCK N+DIFDDD V V GDIY S +H+NWFGHYS+GH GGKW N V+DN GYGFDPHDDSD L+I GN+V+ NG+HGIIASKRCTD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SD VY N ENN GVRWSNGAN N V+ N + V + + +A Y+++G D EA+GN DG RDN +Y N I+S +++ W T+A+D A F +S NN V +N F D +EF SCF GTD
Sbjct: 35 SAPDISWAESSNRLYIDGGCATMADIYEDRSDNLGAKGPLYYFDQENNVISETYTGVYYLDSNIHIRNGATLEIDGTGALA--CETLLMAGNDDITGSDSLN-IRAHGGNLVVRDTKIFSWDITTGTYDTNTGNGRPYLSAITEFITGRDEDLCPSDTQAGEDGYSTGQAKEQMGVARMDIYDSELAYLGYSESESYGISYKARGLCKTLENVDIFDDDQDFPVYGAYAVYGDIYRSKIHNNWFGHYSYGHQGGKWIDNDVYDNVGYGFDPHDDSDHLEIRGNKVWGNGYHGIIASKRCTDITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCDVYDNVFENNPRGVRWSNGANRNNVYSNTMTVGSGDDDDYAIYLYRGNDEPEADGNPDGHPRDNKIYDNNIYSGKEVAWLTTDADDXXXXXXXXXXXSKAIFE-DSTNNLVRDNTFTDSSFEFSVTN-SCFSTGTD 514
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 272 bits (696), Expect = 2.340e-82 Identity = 179/466 (38.41%), Postives = 249/466 (53.43%), Query Frame = 1
Query: 43 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGES----AYFGGESKNNKVNNNMFPDG-WEFETDGESCFR----EGTDPEC 1407
+GGC T+ + E R GK GP++ D D + + TGT+ L ++++ +G TL + GSE+ + E LL++N TF + AHGG+LD TK+FSWD D D +DGRSY+SA++E IT + TC G AK MG A MDI SEIGYLGY SE+YG+++K RG C+D SN ++FDD V V G++Y SD+HH FG Y++GH G W+ N +HDN GYGFDPHDDSD L I NEVYNNG+HGIIASKRC E+ ++ V +NT ENNK+GVR+S G DN V+ N+ + ++ Y + GTD + + GR + N+V+ +S + K EA+ F NVF G++ F ++N N DG +E + D ++CF G +P C
Sbjct: 65 TRGGCVTLGQIWESRA--GK--GPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTN-ETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDE-TCE-------GNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDD-----VNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADN-VFSNNTISNNAEYNAYSYLGTDEPDVVSS--GRSQ-NNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 267 bits (683), Expect = 2.200e-80 Identity = 177/466 (37.98%), Postives = 248/466 (53.22%), Query Frame = 1
Query: 43 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGES---AYFGGESKNNKVNNNMFPDGWEFE--TDGESCFR----EGTDPEC 1407
+GGCAT+ + E R GK P++ D D ++T TGT+ L ++++ +G TL + G++ E + + L L S S T+ + AHGG+LD TK+FSWD D D +DGRSY+SAV+E +T + TC G AK MG A MDI SEIGYLG+ SE+YG+++K RG CKD SN +IFDD V V G++Y SD+HH FG Y++GH G W+ N +HDN GYGFDPHDDSD L I NEVYNNG+HGIIASKRC E+ ++ V +NT ENNK+GVR S G DN V+ +I+ +++ Y + G+D + + GR + N+V+ +S + K EA+ F NVF G++ ++ N+ + N D +FE +SCF G +P C
Sbjct: 69 TRGGCATLGQIWESRA--GK--APLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTD-EGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDE-TCE-------GNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDD-----VNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADN-VFSENIISNNSKYNAYTYLGSDEPDVVSS--GRSQ-NNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 265 bits (677), Expect = 1.210e-79 Identity = 178/426 (41.78%), Postives = 247/426 (57.98%), Query Frame = 1
Query: 43 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESK 1314
+GGC T+ + E++ + P++ D +D+ TGT+ L ++F+ +G TL + G+ S + + L L S S TF + AHGG+LD TK+F+WD D D DGRSY+SAV+E IT DDS + NG+AK +MG A MDI SE+GYLGY GSE+YG+++K RG C D SN D+F+D V V G+IY SD+HHN FG Y++GH G W+ N +HDN GYGFDPHDDSD L I NEVY+NG+HGIIASKRC XXXXXXXXXXXXXXXX E+ ++ V N ENNK+G+R+S G+ N V+ N+++ + +++ Y + G+D + + GR +DN +N I + + K +A+ F N F + F K
Sbjct: 62 TRGGCVTLEQIWEHQRGEA----PLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGT-SAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVIT--------DDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFED-----VNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRN-VFFNNVISGSTRYSTYSYLGSDAPDVV--DSGRSQDNVFQENNIIGGVESI-KLLDADGTQFIDNTFEDATTIRFNDAKK 465
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 265 bits (677), Expect = 1.280e-78 Identity = 169/464 (36.42%), Postives = 237/464 (51.08%), Query Frame = 1
Query: 31 GALHVQGGCATIRDLIEYR---TNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLAS------NSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDGWEFETDGESCFRE 1389
G +GGC T+ + E R T G + P++ D Y+D TGT+ LE D+++ +G TL + G+ S E L ++ + T+ + AHGG+LD +TK+F WD N YDMD +DGRSY+SAV+E + T+ TC G AK MG A MDI SE+GY+G+ SE+YG+++K RG CKD SN ++FD V V G+IY S+LHH F Y++GH G W+ NTVH N GYG+DPHDDSD L I N VY+N WHGIIASKRC + E+S++++ N E NK+G+R S G DN V N+ + +Q+A Y ++G+DP E + GR +DN N + + K E++ NVF+ F ++N N D E E +CF E
Sbjct: 137 GVEGERGGCVTVEQIWEARGGGTTTGAKA-PLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQ-TCE-------GNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQ-----VNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFV-SNNTMTNTSQYAIYTYQGSDPAEVQPT--GRSQDNIFDSNTVVGGPQAI-KLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACFAE 582
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI) HSP 1 Score: 260 bits (664), Expect = 3.920e-77 Identity = 192/463 (41.47%), Postives = 256/463 (55.29%), Query Frame = 1
Query: 49 GGCATIRDLIEYR--TNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVV--EANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDGWEFETDGESCFREGTD 1398
G CAT+ D+ E R T G+ GP++ FDE T+ TG++YL S +++T GA L + G S+ +C+ LLLAS++ F + A+GG + + T + SWDL D + DGRSYLSA++E I + G A DMG A MDI SEI +LG+ SE+YGI+YK RG C D SN ++F+ VGVTGDI GS +HH +FGHYS+GH GG W YNTVHDN GYGFDPHDDSD + I N XXXXXXXXXXX XXXXXXXXXX E+S+ ++ +N L NK G+R S G+ +N + N IV+ E ++A Y+++G D EG+ DGR R+N V+ N + SD +V A A+DN+ N G ES + +S N N PD EF+ + SCF +D
Sbjct: 69 GACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGL-SKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMEC--------EGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFE-----TVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGS-DGRPRNNRVFDNSLMSDNAVVM-ARNADDNIIEGNTIFGRESRFV--DSFNTLWYGNSVPDVHEFKLEDGSCFDPESD 513
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI) HSP 1 Score: 259 bits (661), Expect = 1.290e-76 Identity = 202/464 (43.53%), Postives = 272/464 (58.62%), Query Frame = 1
Query: 49 GGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEAN--QFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDG-WEFETDGESCFREGTDPE 1404
G C T+ D+ E R +D GP++ FDE +DT TG++YLES ++IT G+ L + G S+ +C+ LLLAS+ F + AHGG L + T + SWDL D + DGRSYLSA++E IT + TC +G AK DMG A MDI SE+ +LG+ SE+YGI+YK RG CKD SN ++FD +V VTGDI GSD+H N+FGHYS+GH GG W +N +H N GYGFDPHDDSD + I NEV XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX E+S V N + NK G+R S G++DN ++ NDI++ ++A Y+++G D + DGR R+N ++ N + SD ++V K ++D F NV +G S + +S N +N DG +++ + SCF +D E
Sbjct: 79 GACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGL-SKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAE-TC-------DGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFD-----SVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVS---DGRPRNNHIFDNSLVSDNEVV-KMLNSDDTAFEGNVVYGRVSRFK--DSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIE 522
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 249 bits (637), Expect = 5.120e-74 Identity = 165/454 (36.34%), Postives = 231/454 (50.88%), Query Frame = 1
Query: 43 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDGWEFETDGESCFREGTD 1398
+GGC T+ + E + DG P++ D + + TGT+ L ++++ +G TL + G S + + L L S S TF + A+GG+LD TK+F+WD D D SDGRSY+SAV+E IT DD + NG+AK +MG A MDI SE+ YLGY G+E YG+++K RG C D N ++FDD V V G+IY SD+HHN FG Y++GH G W+ N +HDN GYGFDPHDDSD L I NEV+NNG+HGIIASKRC E+ ++ V NT ENNK+GVR S G N ++ +++ + +F + + G D E + GR +DN +N I + + EA+ F N F + F +K N D + D + F E +D
Sbjct: 36 TRGGCVTLEQIWEQQV-DGS---PLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGI-SAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVIT--------DDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDD-----VNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRN-IFSKNVITGSAEFNTFSYLGADKPEVV--DSGRSQDNVFMENNIIGGVESIL-LKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADS-TLKVDRGATFDESSD 466 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7968.19267.1 >prot_Ecto-sp13_S_contig7968.19267.1 ID=prot_Ecto-sp13_S_contig7968.19267.1|Name=mRNA_Ecto-sp13_S_contig7968.19267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp RTSPTISYNDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTback to top mRNA from alignment at Ecto-sp13_S_contig7968:113..5552- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7968.19267.1 ID=mRNA_Ecto-sp13_S_contig7968.19267.1|Name=mRNA_Ecto-sp13_S_contig7968.19267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5440bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7968:113..5552- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7968:113..5552- >mRNA_Ecto-sp13_S_contig7968.19267.1 ID=mRNA_Ecto-sp13_S_contig7968.19267.1|Name=mRNA_Ecto-sp13_S_contig7968.19267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7968:113..5552- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |