mRNA_Ecto-sp13_S_contig796.19258.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A6H5K0L5_9PHAE (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0L5_9PHAE) HSP 1 Score: 716 bits (1849), Expect = 5.430e-255 Identity = 367/380 (96.58%), Postives = 372/380 (97.89%), Query Frame = 2
Query: 59 MGRQLLVGVLSLATGAVGFLSTSLLPRPSSKLAGRHHDLCRMCAPSADAKEGLGASPALTREGWLKTTTAAAALGVGIAVSPGSSTAADGGAPKGLPASGYFVQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARNVFVAYGDESLQNKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLGPLAGDALRLSGYDKAGVSVALNPVDSKIFEGGTFGKLAVLTKDTKALAEKVSASGGAKNTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEMKPPSSAQEES 1198
M RQLL+G LSLATG VGFLSTSLLPRP SKLAGRHHDLCRMCAPS+DA+EGLGASPALTREGWLK TTAAAALGVGIAVSPGSSTAADGGAPKGLPASGYFVQHAVFKVPDMDEEVKFFT+GLGMKVVRQREVNG RNVFVAYGDESLQ KDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLGPLAGDALRLSGYDKAGVSVALNPVDSKIFEGGTFGKLAVLTKDTKALA+KVSASGGAK TGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEMKPPSSAQEES
Sbjct: 1 MRRQLLIGSLSLATGTVGFLSTSLLPRPPSKLAGRHHDLCRMCAPSSDAQEGLGASPALTREGWLKATTAAAALGVGIAVSPGSSTAADGGAPKGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGVRNVFVAYGDESLQTKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLGPLAGDALRLSGYDKAGVSVALNPVDSKIFEGGTFGKLAVLTKDTKALADKVSASGGAK-TGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEMKPPSSAQEES 379
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A835Z3V5_9STRA (Metal ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V5_9STRA) HSP 1 Score: 280 bits (715), Expect = 4.130e-85 Identity = 157/313 (50.16%), Postives = 199/313 (63.58%), Query Frame = 2
Query: 233 LTREGWLKTTTAAAALGVGIAVSPG-SSTAADGGAPKGLPASGYFVQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARNVFVAYGDESLQNKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLGPLAGDALRLSGYDKAGVSVALNPVDSKIFEGGTFGKLAVLTKDTKALAEKVSASGGAKNTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEM 1168
++R WL T A+ +G+ P + AA +GLPASG+F+QHAV KV D+ +KF+ +GLGMK+VR+R ++ R VF+AYG E+L + DGGYF+LEL K P Y G F+YLGLTL T+ + AGG +VPHWF KDFVE SP G VRVK G RRDP +VVAFG+ AY+ + L MKEQ GLLK+LGPLAGD L GYD + VSV L D+ + +G F K+A+LTK+T +A+ +S T G V F GE PGIGTKVA+TID E VVFVDYDDFE E+
Sbjct: 8 VSRRAWLTTAAVGPAIALGVGAQPVLAKQAAVAQGVQGLPASGFFIQHAVLKVNDLSANIKFWCEGLGMKLVRERTIDNVRTVFLAYGKETLSSGDGGYFALELTQAQK--PVYGVGSSFKYLGLTLPDKPMTLGIRATDAGGEIVPHWFLEKDFVEIKSPDGVPVRVKSGARRDPVTVVAFGSNDVKATQAYYKDTLRMKEQRGGLLKLLGPLAGDGPVL-GYDGSDVSVVLVKEDAPVTQGQIFDKIAILTKNTVGMADAIS------KTNYGKVEFVGEAPGIGTKVADTIDPEFHDVVFVDYDDFEKEL 311
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A6U4N634_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4N634_HEMAN) HSP 1 Score: 132 bits (332), Expect = 1.710e-29 Identity = 109/285 (38.25%), Postives = 147/285 (51.58%), Query Frame = 2
Query: 362 FVQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARNVFVAYGDESLQNKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRD-----PFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLGPLAGDALRL----SGYDKAGVSVALNPVD--SKIFEGGTFGKLAVLTKDTKALAEKVSASGGAKNTGGGDVLFAGEVPGIGTKVANTIDFEGRG--VVFVDYDDFEGEMKPP 1177
FVQHAV K D+DEEV F+T+GLGMKV+R R+V G FV YG E+L+N GG+ SLE+V KA G Q + + T T A K+ +GG V+ GT DF EA SPSG VRV E K +D P + T ++ ++F V G+ Q GL ++ AG ++ L + + G +V L P+ S+ GT +L VL +D EK + GAK V+F GE G+ T VA ++ G G VV VD FE E+ P
Sbjct: 122 FVQHAVIKAVDVDEEVDFWTQGLGMKVLRTRKVGGRETKFVGYGPETLRNNRGGHVSLEIVQSSKAKVDIGQG--LQRFLIEIPKTPDTRA-KLIKSGGEVLKKDLGTDDFFEALSPSGYKVRVCESKDKDKMITHPVKGLTLKTNDLPRSLSFFKAV-GLVPQAEGLFPMM---AGGSVLLRYEMNTGEAVGAAVVLEPLQKGSERVNAGTAFQLRVLCEDIDGTVEK-AVEAGAK------VVFEGEQQGVSTHVA-VLNEPGTGYVVVLVDPAGFESELPQP 391
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A7S0W5Z1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W5Z1_9CRYP) HSP 1 Score: 119 bits (299), Expect = 2.000e-26 Identity = 72/166 (43.37%), Postives = 94/166 (56.63%), Query Frame = 2
Query: 365 VQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARNVFVAYGDESLQNKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRD---PFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLL 853
VQHAV D+D+EV+F+TKGLGMK +R R V G FV YG ES + GG+FSLE+ P+ G Q+L L L + I KV+ AGG+VVP WFGT DF+E SPSG R+++ K + PF + T A+ +V GM +Q GLL
Sbjct: 105 VQHAVILAKDLDDEVEFWTKGLGMKELRSRTVKGVVTRFVGYGPESPASPVGGHFSLEITEGPRKA---DIGTGLQHLDLVLPPSTDRIL-KVEDAGGSVVPRWFGTADFIEVQSPSGYVARIRQAKGAEVDYPFKGLTLRTNDVALTGAFLKSV-GMAKQGGGLL 265
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A7S0U7W2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U7W2_HEMAN) HSP 1 Score: 119 bits (298), Expect = 2.060e-26 Identity = 75/168 (44.64%), Postives = 95/168 (56.55%), Query Frame = 2
Query: 329 GAPKGLPASGYFVQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARNVFVAYGDESLQNKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKA-TAYFHNVLGM 829
GA L A G VQHAV D+D+EV F+T GLGM+ +R R V G FV YG ESL + GG+FSLE+ P+ + G Q+L L L + I KV+ AGG+VVP WFGT DFVE SPSG R+++ K D + V + D A TA F +GM
Sbjct: 102 GAKGALEAPG-LVQHAVILAKDLDDEVDFWTNGLGMRELRSRTVKGVTTRFVGYGPESLTSPIGGHFSLEITEGPRK---FDIGTGLQHLNLVLPPSTDRIL-KVEDAGGSVVPRWFGTSDFVEVQSPSGYVARIQQAKAAD-YPVKGLTLRTNDMAMTAEFLKSIGM 263
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.370e-26 Identity = 104/299 (34.78%), Postives = 139/299 (46.49%), Query Frame = 2
Query: 362 FVQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARN--VFVAYGDESLQ-NKD-----------GGYFSLELVYDPKAPPG------YSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGM------KEQDAGLLKVLGPLAGDALRLSGYDKAGVSVALNPVDSK----IFEGGTFGKLAVLTKDTKALAEKVSASGGAKNTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEM 1168
FVQHAV VPD++ ++F+T+GLGM+VVR R A FVAYG E L KD GG+FSLELV P PP Y G QY+ + + + + KV AAGG V+ + G K + + G RRDP VA K+ ++ +VLGM K ++A + V P GYD+ G V L P D K I G + KLAVL D + ++V A ++AG+ PG T VA D +G V V+YDDF E+
Sbjct: 108 FVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELV-GPLNPPADGELPFYDPGNGVQYIQIAVDTYRIS---KVIAAGGEVIFGYGGLK------------INLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREA-VDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGA------------MYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.540e-25 Identity = 105/305 (34.43%), Postives = 140/305 (45.90%), Query Frame = 2
Query: 362 FVQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARNVFVAYGDESLQNKDGGY------------FSLELVYDPKAPPG----YSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKV----LGPLAGDALRLSGYDKAGVSVALNPVDSK-----IFEGGTFGKLAVLTKDTKALAEKVSASGGAKN--TGGGDVLFAGEVPGIGTKVANTID-FEGRGVVFVDYDDFEGEMKPPSSAQE 1192
F QH V VPDM + F+ GL M+V+R R V G + FV YG E+L+ G Y F+LEL K G G YL L + S + K+ AGG + + +V SP G +V G RRDP ++A KA+ ++ N LGM+EQ L ++ P R +++ G + L P+ K + GG KLA+L D V GGA++ G DV FAGE PGIGTKVA T D G GVV V+ +D E E+ SA E
Sbjct: 73 FTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTEEGDTPVLDPGNAAAYLQLAVPSLRLS---KLAEAGGKIKSAY----GWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTD-------VVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKELVGTVSAGE 363
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 114 bits (285), Expect = 3.820e-24 Identity = 97/315 (30.79%), Postives = 139/315 (44.13%), Query Frame = 2
Query: 362 FVQHAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGARN--VFVAYGDESLQ---------------NKDGGYFSLELVYDPKAPP--------------GYSTGGPFQYLGLTLS----STLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKV-----LGPLAGDALRLSGYDKAGVSVALNPVDSKIFE------GGTFGKLAVLTKDTKALAEKVSASGGAKNTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEM 1168
++QHAV VP MD+ + F+T+GLGM+V+R R N FV YG E+L N+ G +F+LEL+ + + PP Y G Q+L + L S LA + A G ++E +P G +R+ G+RRDPF F + A +++ LGM+E + L P GY + + L D KI + G F KLA+L+++ V G + N G F G VPGIGT VA D +G G+V V+YDDFE E+
Sbjct: 13 YIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELI-EKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYG-----------WIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRN-------VVEEGPSLNAG-----FTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A2G5EPW9_AQUCA (Lactoylglutathione lyase n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5EPW9_AQUCA) HSP 1 Score: 87.0 bits (214), Expect = 4.310e-15 Identity = 80/277 (28.88%), Postives = 128/277 (46.21%), Query Frame = 2
Query: 371 HAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGAR--NVFVAYGDESLQNKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVV----PHWFGTKDFVEATSPSGTTVR-VKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLGPLAGDALRLSGY---DKAGV-SVALNPVDSKIFEGGTFGKLAVLTKDTKALAEKVSASGGAKNTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEM 1168
HAV++V D+D+ +KF+T+GLGMK++R+R++ + N F+ +G E+ Q F +EL Y+ Y G F + + + + + V A GG V P G+ P G T ++ G +P V D+A +++ LGMK L K P + + GY DK V + N ++ +G + ++AV T D AE V+ + GG G +PGI TK+ +D +G V VD +DF E+
Sbjct: 26 HAVYRVGDLDKTIKFYTEGLGMKLLRKRDIPDEKYSNAFLGFGPETSQ------FVVELTYNYGVDK-YDIGTGFGHFAIA-TEDINKLVENVRAIGGNVTREPGPVKGGSTVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAISFYEKALGMKL----LRKKDVPDYKYTIAMVGYADEDKTTVLELTYNYGVTEYTKGNAYAQIAVSTDDVYKSAEVVNLV--TQELGGKITRQPGPIPGINTKITAFLDPDGWKTVLVDNEDFLKEL 288
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Match: A0A5C7GRC9_9ROSI (Lactoylglutathione lyase n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GRC9_9ROSI) HSP 1 Score: 89.0 bits (219), Expect = 7.730e-15 Identity = 78/277 (28.16%), Postives = 123/277 (44.40%), Query Frame = 2
Query: 371 HAVFKVPDMDEEVKFFTKGLGMKVVRQREVNGAR--NVFVAYGDESLQNKDGGYFSLELVYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVV----PHWFGTKDFVEATSPSGTTVR-VKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLGPLAGDALRLSGY----DKAGVSVALNPVDSKIFEGGTFGKLAVLTKDTKALAEKVSASGGAKNTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEM 1168
HAV++V D+D +KF+T+GLGMK++RQR++ + N F+ +G E F +EL Y+ Y G F + G+ + KV A GG V P G P G T ++ G +P V D++ ++ +GMK L K+ P L + GY + + + N ++ +G + ++AV T D AE V+ + GG G +PGI TK+ +D +G V VD +DF E+
Sbjct: 246 HAVYRVGDLDRTIKFYTEGLGMKLLRQRDIPEEKYTNAFLGFGPEESN------FVVELTYN-YGVTSYDIGAGFGHFGIATQDVYKMVE-KVRALGGNVSREPGPVKGGNSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAMGMKL----LRKIDRPEYKYTLAMIGYADEYETTVLELTYNYGVTEYAKGNAYAQIAVSTDDVYKSAEVVNLV--TQELGGKITRQPGPLPGINTKITAFLDPDGWKTVLVDNEDFLKEL 508 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig796.19258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig796.19258.1 >prot_Ecto-sp13_S_contig796.19258.1 ID=prot_Ecto-sp13_S_contig796.19258.1|Name=mRNA_Ecto-sp13_S_contig796.19258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=381bp MGRQLLVGVLSLATGAVGFLSTSLLPRPSSKLAGRHHDLCRMCAPSADAKback to top mRNA from alignment at Ecto-sp13_S_contig796:13472..20746- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig796.19258.1 ID=mRNA_Ecto-sp13_S_contig796.19258.1|Name=mRNA_Ecto-sp13_S_contig796.19258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7275bp|location=Sequence derived from alignment at Ecto-sp13_S_contig796:13472..20746- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig796:13472..20746- >mRNA_Ecto-sp13_S_contig796.19258.1 ID=mRNA_Ecto-sp13_S_contig796.19258.1|Name=mRNA_Ecto-sp13_S_contig796.19258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1143bp|location=Sequence derived from alignment at Ecto-sp13_S_contig796:13472..20746- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |