prot_Ecto-sp13_S_contig796.19256.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig796.19256.1
Unique Nameprot_Ecto-sp13_S_contig796.19256.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length510
Homology
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BLAST of mRNA_Ecto-sp13_S_contig796.19256.1 vs. uniprot
Match: D7FU50_ECTSI (CBF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU50_ECTSI)

HSP 1 Score: 607 bits (1566), Expect = 2.020e-207
Identity = 408/503 (81.11%), Postives = 412/503 (81.91%), Query Frame = 0 
Query:    1 MAEVKERVRVLRQVEYGVLSNVENANGIVTLLKELGRETETSVAVAAAHCLRRIFTQLLDPAKNPQLPRPPPRGASPDTFVGGSSKAGKXXXXXXXXXXXXXXXXXXDSAGSVAAGVEGGQDKAAGVYQAWLEARYLDFLRVLLGWIAEFDDFHRQGPALRTLMQFVEIEPILCVSAAKLCRAGRRGGGLVGGDGGLASPGAGTIWGGLFAELMRTIVLGPCSMEPKLLKSLGEDFVNVHDDIRYFLLASVTSIARQALADDDKLQEQRASPTSLSSPSRSRFVLPENSPLRGFRGTAAAFTDARGGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIVEASAEED-GGGQKMDLAEISGRLARVLMVVRMVEEQSDLTAFLLPVRLSLPSTVSSSASRQLGNPAVGLDGDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGGAEGKKMRMLAIERLRYHKKV 502
            M EVKER+RVLRQVEYGVLSNVENANGIV+LLKELGRETETSVAVAAAHCLRRIFTQLLDPAKNPQLPRP PRG  PDT VGGSSKAG XXXXXXXXXXXXXXXXX DSA SV AGVEGGQDKAA VYQAWLEARYLDFLRVLLGWIAEFDDFHRQGPALRTLMQFVEIEPILCVSAAKL RAGRRGGGL+GGDGGLASPGAGTIWGGLFAELMRTIVLGPCSMEPKLLKSLGEDFVNVHDDIRYFLLASVTSIAR ALADD KLQEQRASP+  S    SRFVLPENSPLRGFRGTAAAF DARGG G                           XXXXXXXXXXXXXXXXXXXXXXXXX            GGGQKMDLAEISGRLARVLMVVRMVEEQSDLTAFLLPVRLSLPSTVSSSASRQLGNP VGLDGDAS XXXXXXXXXXXXX                           R GAEGKKMRMLAIERLRYHKK 
Sbjct:    1 MTEVKERIRVLRQVEYGVLSNVENANGIVSLLKELGRETETSVAVAAAHCLRRIFTQLLDPAKNPQLPRPSPRGGDPDTIVGGSSKAGXXXXXXXXXXXXXXXXXXGDSARSVVAGVEGGQDKAARVYQAWLEARYLDFLRVLLGWIAEFDDFHRQGPALRTLMQFVEIEPILCVSAAKLSRAGRRGGGLLGGDGGLASPGAGTIWGGLFAELMRTIVLGPCSMEPKLLKSLGEDFVNVHDDIRYFLLASVTSIARHALADDTKLQEQRASPSPSSXXXPSRFVLPENSPLRGFRGTAAAFADARGGAGGGGETVGSAGKGSGGCETAAGASAVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGQKMDLAEISGRLARVLMVVRMVEEQSDLTAFLLPVRLSLPSTVSSSASRQLGNPEVGLDGDASSXXXXXXXXXXXXXGRAGSSGKGKRKAPEKGKGG-------RVGAEGKKMRMLAIERLRYHKKA 496
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig796.19256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU50_ECTSI2.020e-20781.11CBF domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027193Nucleolar complex protein 4PANTHERPTHR12455NUCLEOLAR COMPLEX PROTEIN 4coord: 9..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig796contigEcto-sp13_S_contig796:678..5122 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig796.19256.1mRNA_Ecto-sp13_S_contig796.19256.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig796 678..5175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig796.19256.1 ID=prot_Ecto-sp13_S_contig796.19256.1|Name=mRNA_Ecto-sp13_S_contig796.19256.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=510bp
MAEVKERVRVLRQVEYGVLSNVENANGIVTLLKELGRETETSVAVAAAHC
LRRIFTQLLDPAKNPQLPRPPPRGASPDTFVGGSSKAGKNKKKKKKRARS
EDDAGGGDSAGSVAAGVEGGQDKAAGVYQAWLEARYLDFLRVLLGWIAEF
DDFHRQGPALRTLMQFVEIEPILCVSAAKLCRAGRRGGGLVGGDGGLASP
GAGTIWGGLFAELMRTIVLGPCSMEPKLLKSLGEDFVNVHDDIRYFLLAS
VTSIARQALADDDKLQEQRASPTSLSSPSRSRFVLPENSPLRGFRGTAAA
FTDARGGTGGGGETAAGGGKGSGDGETAAGASAVDSSALVATPSKKKRKK
RKKTGDQPEEKGEIVEASAEEDGGGQKMDLAEISGRLARVLMVVRMVEEQ
SDLTAFLLPVRLSLPSTVSSSASRQLGNPAVGLDGDASSSSSDSSGDEEE
EEEEEEEEEGRAGSSGKGKRKAPGKGKGERGGAEGKKMRMLAIERLRYHK
KVRRLRCFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027193Noc4