prot_Ecto-sp13_S_contig79530.19248.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig79530.19248.1
Unique Nameprot_Ecto-sp13_S_contig79530.19248.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: D7FRC8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC8_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.520e-41
Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENY 77
            ++D CVVLLIRDSRGAYYPSIYLDDHGEEDAQLR GRPLFLNKHRYDSL+QLYLRHKVAQEV AIRASSDRVIRENY
Sbjct:  177 IYDGCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRHGRPLFLNKHRYDSLRQLYLRHKVAQEVLAIRASSDRVIRENY 253          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: D7G3D4_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D4_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.390e-40
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
Query:    5 CVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            CVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY
Sbjct: 1781 CVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 1854          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.100e-24
Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  RC VLL R  R AY+ S+YLD+HGEED  LRRGRPL+L++ RY +L+  Y +H++AQEV+AIRASSDRVIREN+Y
Sbjct: 2444 LVQRCQVLLARGGRAAYWASLYLDEHGEEDVGLRRGRPLYLSEQRYGALRLAYAQHRIAQEVTAIRASSDRVIRENFY 2521          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: A0A7S1Z2B5_TRICV (E3 ubiquitin-protein ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2B5_TRICV)

HSP 1 Score: 93.2 bits (230), Expect = 1.680e-22
Identity = 42/78 (53.85%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  +C VLL+ +++ AY  S+Y+D+HGEED  LRRGRPLFL   RY++L+ L+ RH + +EV+ IR++SDRVIR+N+Y
Sbjct:   69 LVQKCTVLLVHNNKSAYSASLYVDEHGEEDPGLRRGRPLFLKDERYEALEALWRRHGIPREVAQIRSTSDRVIRDNWY 146          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: A0A7S4RXC5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RXC5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.500e-21
Identity = 43/78 (55.13%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  +C VLL+ +++ AY PS+Y+D+HGEED  LRRGRPLFLN  R+ SL+ L+ +H + +EV+ IR++SDRVIR+N+Y
Sbjct:  628 LVQKCAVLLMHNNKSAYSPSLYVDEHGEEDPGLRRGRPLFLNNDRFQSLEMLWRQHGIPREVAQIRSTSDRVIRDNWY 705          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: B7G3L3_PHATC (E3 ubiquitin-protein ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3L3_PHATC)

HSP 1 Score: 94.7 bits (234), Expect = 6.490e-21
Identity = 43/78 (55.13%), Postives = 64/78 (82.05%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  +C VLL+ +++ AY PS+Y+D+HGEED  LRRGRPLFLN+ RY +L+QL+ ++ + +EV+ IR++SDRVIR+N+Y
Sbjct:  593 LVQKCTVLLMHNNKSAYSPSLYVDEHGEEDPGLRRGRPLFLNQARYHALEQLWRQNGIPREVAQIRSTSDRVIRDNWY 670          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: A0A7S2LK20_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LK20_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 6.640e-21
Identity = 44/78 (56.41%), Postives = 64/78 (82.05%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  +CVVLLI +++ AY  S+Y+D+HGEED  LRRGRPL+L+K RY+ L++L+ +H V +EV+ IR++SDRVIR+N+Y
Sbjct: 1337 LLHKCVVLLIHNNKSAYSLSLYVDEHGEEDVGLRRGRPLYLHKDRYECLQKLWSQHDVPREVAQIRSTSDRVIRDNWY 1414          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: A0A7S0C9S2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9S2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.930e-21
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  +C VLL+ +++ AY  S+Y+D+HGEED  LRRGRPLFL K RY+SLK L+ +H + +EV+ IR++SDRVIR+N+Y
Sbjct:  395 LVQKCTVLLMHNNKSAYSASLYVDEHGEEDPGLRRGRPLFLKKTRYESLKFLWRQHGIPREVAQIRSTSDRVIRDNWY 472          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: A0A7S2MIJ1_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MIJ1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 9.040e-21
Identity = 42/78 (53.85%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  +C VLL+ +++ AY PS+Y+D+HGEED  LRRGRPLFL   R+ SL+ L+ +H + +EV+ IR++SDRVIR+N+Y
Sbjct:  326 LVQKCTVLLMHNNKSAYSPSLYVDEHGEEDPGLRRGRPLFLKNERFQSLEMLWRQHGIPREVAQIRSTSDRVIRDNWY 403          
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Match: A0A7S0F4Q9_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F4Q9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.220e-20
Identity = 42/78 (53.85%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 78
            L  +C VLL+ +++ AY PS+Y+D+HGEED  LRRGRPLFLN  RY +L+ L+ +  + +EV+ IR++SDRVIR+N+Y
Sbjct:  279 LVQKCTVLLMHNNKSAYSPSLYVDEHGEEDPSLRRGRPLFLNAERYRALEVLWRQQGIPREVAQIRSTSDRVIRDNWY 356          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79530.19248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRC8_ECTSI1.520e-4192.21E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
D7G3D4_ECTSI2.390e-40100.00E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A836CB31_9STRA1.100e-2464.10E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A7S1Z2B5_TRICV1.680e-2253.85E3 ubiquitin-protein ligase n=1 Tax=Trieres chinen... [more]
A0A7S4RXC5_9STRA3.500e-2155.13E3 ubiquitin-protein ligase n=2 Tax=Ditylum bright... [more]
B7G3L3_PHATC6.490e-2155.13E3 ubiquitin-protein ligase n=2 Tax=Phaeodactylum ... [more]
A0A7S2LK20_9STRA6.640e-2156.41E3 ubiquitin-protein ligase n=1 Tax=Leptocylindrus... [more]
A0A7S0C9S2_9STRA6.930e-2156.41E3 ubiquitin-protein ligase n=1 Tax=Proboscia iner... [more]
A0A7S2MIJ1_9STRA9.040e-2153.85E3 ubiquitin-protein ligase n=1 Tax=Helicotheca ta... [more]
A0A7S0F4Q9_9STRA2.220e-2053.85E3 ubiquitin-protein ligase n=1 Tax=Craspedostauro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 3..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig79530contigEcto-sp13_S_contig79530:11..606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig79530.19248.1mRNA_Ecto-sp13_S_contig79530.19248.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig79530 11..606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig79530.19248.1 ID=prot_Ecto-sp13_S_contig79530.19248.1|Name=mRNA_Ecto-sp13_S_contig79530.19248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
LHDRCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLK
QLYLRHKVAQEVSAIRASSDRVIRENYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like