prot_Ecto-sp13_S_contig79483.19240.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig79483.19240.1
Unique Nameprot_Ecto-sp13_S_contig79483.19240.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
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BLAST of mRNA_Ecto-sp13_S_contig79483.19240.1 vs. uniprot
Match: A0A6H5K0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V0_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 7.490e-25
Identity = 50/56 (89.29%), Postives = 53/56 (94.64%), Query Frame = 0 
Query:    5 VTPDEQEEERLPEETKRRVAYVRSDAMHPMVSTPTWGYFLNLFELSRLLDLPADDL 60
            +TPDEQ+EE LPE TKRRVA+VRSDAMH MVSTPTWGYFLNLFELSRLLDLPADDL
Sbjct:   82 LTPDEQQEEELPENTKRRVAWVRSDAMHAMVSTPTWGYFLNLFELSRLLDLPADDL 137
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BLAST of mRNA_Ecto-sp13_S_contig79483.19240.1 vs. uniprot
Match: A0A6H5KB44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB44_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.830e-16
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:   23 VAYVRSDAMHPMVSTPTWGYFLNLFELSRLLDLPADDL 60
            VA+VRSDAMH MVSTPTWGYFLNLFELSR+LDLPADDL
Sbjct:  101 VAWVRSDAMHAMVSTPTWGYFLNLFELSRVLDLPADDL 138
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BLAST of mRNA_Ecto-sp13_S_contig79483.19240.1 vs. uniprot
Match: D8LNQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ4_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.500e-13
Identity = 37/46 (80.43%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:   15 LPEETKRRVAYVRSDAMHPMVSTPTWGYFLNLFELSRLLDLPADDL 60
            LPE+ KR      SDAMH MVSTPTWGYFLNLFELSRLLDLPADDL
Sbjct:  164 LPEKKKR------SDAMHAMVSTPTWGYFLNLFELSRLLDLPADDL 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79483.19240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K0V0_9PHAE7.490e-2589.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB44_9PHAE5.830e-1692.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ4_ECTSI1.500e-1380.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig79483contigEcto-sp13_S_contig79483:112..563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig79483.19240.1mRNA_Ecto-sp13_S_contig79483.19240.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig79483 110..563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig79483.19240.1 ID=prot_Ecto-sp13_S_contig79483.19240.1|Name=mRNA_Ecto-sp13_S_contig79483.19240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
GSSTVTPDEQEEERLPEETKRRVAYVRSDAMHPMVSTPTWGYFLNLFELS
RLLDLPADDL
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