prot_Ecto-sp13_S_contig7943.19235.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7943.19235.1
Unique Nameprot_Ecto-sp13_S_contig7943.19235.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length575
Homology
BLAST of mRNA_Ecto-sp13_S_contig7943.19235.1 vs. uniprot
Match: A0A6H5JRR2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR2_9PHAE)

HSP 1 Score: 623 bits (1606), Expect = 3.740e-213
Identity = 446/583 (76.50%), Postives = 456/583 (78.22%), Query Frame = 0
Query:    1 MMMIPGRDEDGGVAGGS-IGARKRPSPSQGGWFYTSSTPAVSEGVAAARLKRVTDGKSEMAGSNDHPAAAGGPWAAGAARGNPYARSGAXXXXXXXXXXXXXXXXXXEKSARRDSYRYAPTNGRHWETYRDQEDSYPLHPKGGGVGWYDSEESGLSRLTSCDSASSTWDEMHARPGAGRSG-DVFDRSRSRAMAAMEMASADAGGPGGGRDPRHPLRDRGGYPTHHPADGPEMMDVRPMAGGPGHRGTQTSAMFPAHLLRHDRFGRYSQGGGA-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPSRWRPVYNGGRDGPGGGPXXXXXXXXSHGDYG-----FDGWXXXXXXHLPGEGATAGKVGTAAAXXXXXXXXXXXXXEWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG-KFPQADDGQDGTSKTSEPQAAVGPTAQTDTAEPAEPPAESGVTAAENWAVAGGSRGDEKTGGVCRAASERLVGEGGGRDGGSKGEEXXXXXXXKTAAXXXXXXXTGGGFHFTVPKANASAGAVSVGNGVASLGMPMAATAV 574
            MMMIPGRDEDGGVA GS IGARKRP PSQGGWFYTSSTPAVSEGVAAA LKRVTDGK+EMAG NDHPAAAG PWAAGAARG+PYARSGAXXXXXXXXXXXXXXXX  EKSARRD YRYAPTNGRHW+TYRDQEDSYPLHPKGG VGWYDSEESGLSRLTSCDSASSTWDEMHARPGAG  G DVFDRSRSRAMAAMEMA ADAGG   GRDP  PLRDRGGYP+HHPADGPEMMDVRPMAGGPGHRGTQTSAMFPAHLLRHDRFGRY QGGGA    XXXXXX                         GAPSRWRPVYNGGR GP GGP XXXXXXX           FDGW       LPGEGA AGKVGTA+A X           EWE           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +FP A+DGQD   KTSEPQAAVG  A TDTA P EPP+ES VTAAEN A    S GDEKTGGVCRAA E LVGEGGGRDGGSKGEE       +    XXXXXX GGGFHFTVPK+NASAGAVSVGNGVASLGMPMAATAV
Sbjct:  263 MMMIPGRDEDGGVADGSPIGARKRPPPSQGGWFYTSSTPAVSEGVAAAHLKRVTDGKAEMAGGNDHPAAAGDPWAAGAARGSPYARSGAXXXXXXXXXXXXXXXX--EKSARRDLYRYAPTNGRHWDTYRDQEDSYPLHPKGGWVGWYDSEESGLSRLTSCDSASSTWDEMHARPGAGGGGGDVFDRSRSRAMAAMEMAPADAGG---GRDPHDPLRDRGGYPSHHPADGPEMMDVRPMAGGPGHRGTQTSAMFPAHLLRHDRFGRYPQGGGAEGAGXXXXXXVYDYPAPPPPMYAMPSQAYVPDPDPGAPSRWRPVYNGGRGGPDGGPGXXXXXXXXXXXXXXXXXXFDGWRDGPAGRLPGEGAAAGKVGTASAAXAPCAATVAPAAEWEEPPTFEEMAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEFPHANDGQDEAWKTSEPQAAVGRAAPTDTAGPGEPPSESSVTAAENGAXXXXSGGDEKTGGVCRAAFEELVGEGGGRDGGSKGEEE------RXXTAXXXXXXXGGGFHFTVPKSNASAGAVSVGNGVASLGMPMAATAV 834          
BLAST of mRNA_Ecto-sp13_S_contig7943.19235.1 vs. uniprot
Match: D8LLB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB3_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 2.880e-105
Identity = 183/229 (79.91%), Postives = 187/229 (81.66%), Query Frame = 0
Query:    1 MMMIPGRDEDGGVA-GGSIGARKRPSPSQGGWFYTSSTPAVSEGVAAARLKRVTDGKSEMAGSNDHPAAAGGPWAAGAARGNPYARSGAXXXXXXXXXXXXXXXXXXEKSARRDSYRYAPTNGRHWETYRDQEDSYPLHPKGGGVGWYDSEESGLSRLTSCDSASSTWDEMHARPGAGRSGDVFDRSRSRAMAAMEMASADAGGPG---GGRDPRHPLRDRGGYPTHHP 225
            MMMIPGRD DGGVA G SIGARKRPSPSQGGWFYTSSTPAVSEGVAAAR+KR T GK+EMAG NDHPAAAG PWAAGAARGNPYARSGA  XXXXXXX         EKSA RDSYRYAPTNGRHWETYRDQEDSYP+HPK GGVGWYDSEESGLSRLTSCDSASSTWDEMHARPGAG  GDVF+RS             DAGG G   GGRDPR PLRDRGGY  HHP
Sbjct:    1 MMMIPGRDADGGVADGSSIGARKRPSPSQGGWFYTSSTPAVSEGVAAARIKRATGGKAEMAGGNDHPAAAGDPWAAGAARGNPYARSGAGAXXXXXXXPCSAGGPP-EKSAHRDSYRYAPTNGRHWETYRDQEDSYPMHPKVGGVGWYDSEESGLSRLTSCDSASSTWDEMHARPGAGGGGDVFNRSXXXXXXXXXXXXXDAGGAGACAGGRDPRDPLRDRGGYSLHHP 228          
BLAST of mRNA_Ecto-sp13_S_contig7943.19235.1 vs. uniprot
Match: D8LLB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB4_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.080e-19
Identity = 83/141 (58.87%), Postives = 89/141 (63.12%), Query Frame = 0
Query:  434 KFPQADDGQDGTSKTSEPQAAVGPTAQTDTAEPAEPPAESGVTAAENWAVAGGSRGDEKTGGVCRAASERLVGEGGGRDGGSKGEEXXXXXXXKTAAXXXXXXXTGGGFHFTVPKANASAGAVSVGNGVASLGMPMAATAV 574
            + P ADDGQDG SKTS+PQ AVGP A T+TAEPAEPPAES VT+ EN A                                     XXXXXXX    XXXXXX TGGGFHFTVPK+NASAG VSVGNGVASLG+PMAATAV
Sbjct:   81 RSPHADDGQDGASKTSKPQEAVGPAALTETAEPAEPPAESSVTSGENGAXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXVTGGGFHFTVPKSNASAGGVSVGNGVASLGLPMAATAV 216          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7943.19235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRR2_9PHAE3.740e-21376.50HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D8LLB3_ECTSI2.880e-10579.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLB4_ECTSI1.080e-1958.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7943contigEcto-sp13_S_contig7943:3054..4778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7943.19235.1mRNA_Ecto-sp13_S_contig7943.19235.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7943 3054..5163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7943.19235.1 ID=prot_Ecto-sp13_S_contig7943.19235.1|Name=mRNA_Ecto-sp13_S_contig7943.19235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=575bp
MMMIPGRDEDGGVAGGSIGARKRPSPSQGGWFYTSSTPAVSEGVAAARLK
RVTDGKSEMAGSNDHPAAAGGPWAAGAARGNPYARSGAAAAAAAAAAAAS
AAGGPPEKSARRDSYRYAPTNGRHWETYRDQEDSYPLHPKGGGVGWYDSE
ESGLSRLTSCDSASSTWDEMHARPGAGRSGDVFDRSRSRAMAAMEMASAD
AGGPGGGRDPRHPLRDRGGYPTHHPADGPEMMDVRPMAGGPGHRGTQTSA
MFPAHLLRHDRFGRYSQGGGAAGAGGGGGGVYDYPAPPPPMYAMPSHAYA
PDPDPGAPSRWRPVYNGGRDGPGGGPGGGGPGGGSHGDYGFDGWRDGPAG
HLPGEGATAGKVGTAAAAAAPSAAIAAPVAEWEEPPTFEEMAAVEAEEKQ
ATAAATGAGAVAGGADQAVAKDKKVAAAAAAGGKFPQADDGQDGTSKTSE
PQAAVGPTAQTDTAEPAEPPAESGVTAAENWAVAGGSRGDEKTGGVCRAA
SERLVGEGGGRDGGSKGEEEGEEEREKTAAAPAPAPVTGGGFHFTVPKAN
ASAGAVSVGNGVASLGMPMAATAV*
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