prot_Ecto-sp13_S_contig7941.19233.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7941.19233.1
Unique Nameprot_Ecto-sp13_S_contig7941.19233.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length274
Homology
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: D8LRR1_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR1_ECTSI)

HSP 1 Score: 513 bits (1321), Expect = 1.200e-183
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0
Query:   22 MLCHSAAGPARGAGHAAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            MLCHSAAGPARGAGHA AAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW
Sbjct:    1 MLCHSAAGPARGAGHATAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 252          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A835Z5Q8_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q8_9STRA)

HSP 1 Score: 375 bits (964), Expect = 5.700e-129
Identity = 182/234 (77.78%), Postives = 204/234 (87.18%), Query Frame = 0
Query:   41 MDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCK-KDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            MD  RQ T  PIVTGTSV+G+KYKDGVMLAADTLASYGSLARYK+VER++PVGE TL+GASGEYSDFQ IME LED  Q D NMDDGF+R+PAE+++ LR +MYNRRNK NPLWNYLLIAG   + G  FLGSVDHIGT YED+ILATGFG HLALPILR++WR D+EEGEARALLEDCMRVLFYRDCRALNRIQIAKAT EG +VSD Y ++T WSLA+F+QPKAG DTDGSW
Sbjct:   38 MDAPRQRTQSPIVTGTSVIGLKYKDGVMLAADTLASYGSLARYKSVERIRPVGESTLLGASGEYSDFQAIMEMLEDQTQEDRNMDDGFKRAPAEVHSYLRAVMYNRRNKMNPLWNYLLIAGVNPRTGGFFLGSVDHIGTAYEDDILATGFGAHLALPILRRRWRADMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATREGVLVSDPYTIETSWSLAAFAQPKAGADTDGSW 271          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: F0Y8W5_AURAN (Proteasome subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W5_AURAN)

HSP 1 Score: 323 bits (827), Expect = 1.930e-108
Identity = 154/229 (67.25%), Postives = 187/229 (81.66%), Query Frame = 0
Query:   45 RQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            RQHTS+PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V+R+   G  TL+GASGE SD+  I+  LE   + ++N +DGFE SP EIY+ LR +MY  RNKFNPLWN L++ G K DG AFLGSVD  GT YED+++ATGFG HLALPI+R KW  D++EGEARALLEDC+RVLFYRDCRAL+ + ++KATA+GT+VSD YK++T+WS ASF  PKAG+D DG W
Sbjct:   24 RQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVQRISKTGSYTLVGASGEMSDYHAILRKLEGLERDNLNANDGFEHSPVEIYSYLRAVMYQARNKFNPLWNSLVVGGYK-DGKAFLGSVDLRGTAYEDDVIATGFGAHLALPIMRAKWHADIDEGEARALLEDCLRVLFYRDCRALDMVVLSKATADGTLVSDPYKIETDWSSASFVVPKAGEDGDGGW 251          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S2RSS8_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSS8_9STRA)

HSP 1 Score: 323 bits (827), Expect = 3.710e-108
Identity = 154/228 (67.54%), Postives = 188/228 (82.46%), Query Frame = 0
Query:   46 QHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            QHT++PIVTGTSV+GIKYKDGVMLAADTLASYG+LA +K+VER+  V +  LIGA GEYSDFQ I + L+     D NMDDG + SP+EI++ LR +MY RRNK NPLWN++L+AG K +G +FLGSVD IGT +ED+ LATGFG +LA+PILRKKWRPDL+EGEARALLE+C+RVLFYRDCRALN+I++AKATAEG+V+SD Y ++T WS ASF   K G D DG W
Sbjct:   44 QHTTRPIVTGTSVIGIKYKDGVMLAADTLASYGTLAMFKDVERIHKVSDSCLIGAGGEYSDFQKIQQVLDRLTSEDRNMDDGHQTSPSEIFHYLRAVMYQRRNKMNPLWNHVLVAGFK-EGKSFLGSVDLIGTAFEDDFLATGFGSYLAIPILRKKWRPDLDEGEARALLEECLRVLFYRDCRALNKIRLAKATAEGSVISDPYTLETSWSAASFQTVKGGLDADGGW 270          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S3ZJK1_9STRA (Proteasome subunit beta n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJK1_9STRA)

HSP 1 Score: 318 bits (815), Expect = 2.640e-106
Identity = 155/237 (65.40%), Postives = 188/237 (79.32%), Query Frame = 0
Query:   37 AAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            A AA    RQHTS+PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V R+   G  TL+GASGE SD+  +++ L+   Q + N DDGFE  PAEIY+ LR ++Y RRNKF+PLWN L++ G K DG  FLGSVD  GT YED+++ATG+G HLALPI+R KW PDL+EGEARALLEDC+RVLFYRDCRAL+ + ++KATA GT+VSD YK++T+W+ ASF  PKAG D DG W
Sbjct:   37 ATAAEAPARQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVTRIARTGSYTLVGASGELSDYHALLDKLKGLAQANANCDDGFEHGPAEIYSYLRAVLYQRRNKFDPLWNSLVVGGFK-DGAPFLGSVDLRGTAYEDDVIATGYGSHLALPIMRAKWTPDLDEGEARALLEDCLRVLFYRDCRALDTVVLSKATATGTLVSDPYKLETDWTSASFVAPKAGGDGDGGW 272          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A6S8AP70_9STRA (Proteasome subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8AP70_9STRA)

HSP 1 Score: 308 bits (788), Expect = 2.000e-102
Identity = 146/227 (64.32%), Postives = 178/227 (78.41%), Query Frame = 0
Query:   47 HTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            HT +PIVTGTSVLG+KYKDG+M+AADTLASYGSLA +K V R+ P G  TL+G SGE SDF HI+  LE+  + ++N DDGFE  PAEIY  LRT+MYNRR+K NPLWN L++ G  KDG +FLG VD  GT Y D+++ATG+G HLA+P++R KWRP LEEGEAR LLEDC+RVLFYRDCRAL+ I ++KAT +GT+VS  YK+ T+WS ASF  PKA  D DG W
Sbjct:   32 HTQRPIVTGTSVLGLKYKDGIMMAADTLASYGSLAMFKEVTRIAPAGTNTLVGGSGEMSDFHHILRLLEELGRENLNADDGFEHPPAEIYRYLRTVMYNRRSKLNPLWNQLVVGG-HKDGESFLGVVDLRGTAYTDDVVATGYGAHLAMPVMRNKWRPGLEEGEARNLLEDCLRVLFYRDCRALDTIILSKATDQGTLVSPPYKLTTDWSSASFVVPKADDDGDGGW 257          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S3HPE8_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPE8_9STRA)

HSP 1 Score: 303 bits (775), Expect = 1.430e-100
Identity = 147/225 (65.33%), Postives = 183/225 (81.33%), Query Frame = 0
Query:   36 HAAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASF 260
            HAA +      HT+QPIVTGT+V+GIKY  GVMLAADTLASYGSLARYK+V RLK VGE TLIGASGE SDFQ IME L+  +Q D+N DDG++RSP+E +N LR I+Y +R K NPLWN LL+AG  K+   FLG VD IGT YE+N +ATGFG +LA+P++R+KW  +++EGEAR+LLEDC+RV+FYRDCRALNRIQIAKA+A+GT+VS+ Y++ TEW  A+F
Sbjct:   11 HAALSPHAPTTHTTQPIVTGTTVIGIKYNGGVMLAADTLASYGSLARYKDVRRLKQVGENTLIGASGEISDFQTIMEMLDSMNQSDINEDDGYKRSPSEYFNYLRAILYQKRGKGNPLWNQLLVAGFHKEAP-FLGYVDLIGTAYEENFIATGFGAYLAIPLIREKWYAEMDEGEARSLLEDCLRVMFYRDCRALNRIQIAKASADGTLVSEPYEISTEWETANF 234          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A812X8W8_9DINO (Proteasome subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X8W8_9DINO)

HSP 1 Score: 291 bits (744), Expect = 7.050e-96
Identity = 131/228 (57.46%), Postives = 180/228 (78.95%), Query Frame = 0
Query:   46 QHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            +HT+QPIVTGTSV+ IKYKDGVM+AADTL SYG LAR+ ++ RLK VG+ TLIG SGEYSDFQ+I+  L++  + D N++DG E +  E++N L  +MYNRRNK NPLWN +++AG + DG A LG+VDHIGT Y ++ + TGFGGH+A+P++R+ W+PD+ E +ARAL+E+CM++L+YRDCR +N+I +AK TAEG +VS+ + + T+W   SF + KAG DT GSW
Sbjct:   22 KHTTQPIVTGTSVIAIKYKDGVMMAADTLGSYGGLARFTDLRRLKVVGKSTLIGCSGEYSDFQYILSLLDELVEEDANVEDGRELTAEEVHNYLTRVMYNRRNKGNPLWNSIVVAGVE-DGVATLGTVDHIGTAYTEDFIVTGFGGHMAIPLIRESWKPDMSESDARALVEECMKILYYRDCRTINKITLAKITAEGGMVSEPFTLATKWDFQSFIKAKAGADTGGSW 248          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S0SUY2_9STRA (Proteasome subunit beta n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUY2_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.300e-91
Identity = 134/225 (59.56%), Postives = 169/225 (75.11%), Query Frame = 0
Query:   48 TSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGS 272
            T+QPIVTG+SVLGIKYKDGVMLAADTLASYGSLARYKN++R++ V   TLIGASGE SDFQ I E L    Q D+N DDG+ +SP EI+N LR ++Y RR K NPLWN LLIAG +K    FLG VD IGT Y++N +ATG+G +LA+P++R++W  DL E EA+ LLE+C+RVLFYRDC+A NRI I+KAT +G  +S+ Y++   W  A+F        +DGS
Sbjct:   23 TTQPIVTGSSVLGIKYKDGVMLAADTLASYGSLARYKNIKRIEKVNNSTLIGASGEISDFQSISEMLSSIEQDDINQDDGYTKSPIEIFNYLRAVLYQRRGKGNPLWNQLLIAGYRKGQEPFLGYVDLIGTSYQENFIATGYGAYLAIPLIRERWHKDLSEDEAKKLLEECLRVLFYRDCKASNRIIISKATIDGVSISEPYEITHNWETATFDARHPTSGSDGS 247          
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S2S9Q9_9STRA (Proteasome subunit beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9Q9_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.640e-91
Identity = 145/249 (58.23%), Postives = 173/249 (69.48%), Query Frame = 0
Query:   31 ARGAGHAAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIME-----TLEDYHQYDVNMD-DGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 273
            A G  +  AA       T++PIVTGTSVLGIKY  GVMLAADTL SYG +A+YK+  RL  V   TLIG  GEYSDF  + E      LED    D   D D       E++N LR +MYNRRNK NPLWN LL+AG   +G  FLG VD IGT YEDNI+ATGFG +LA+P++R+K+RPD+EEGEARALLEDCMRVLFYRDCRALNRIQIAKAT +  ++SD Y+++T W  A + +PK   D DG W
Sbjct:    8 AGGVSNVRAASLSATDRTTRPIVTGTSVLGIKYAGGVMLAADTLCSYGGMAKYKDARRLVDVNGKTLIGGGGEYSDFTAVCELLKRNALEDKCTSDSLYDEDNTHGCAREVWNYLRAVMYNRRNKMNPLWNELLVAGYSSEGQPFLGYVDKIGTTYEDNIVATGFGSYLAMPLMREKYRPDMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATPDEVLISDPYELETNWDSAEYMKPKGQLDGDGGW 256          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRR1_ECTSI1.200e-18399.60Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A835Z5Q8_9STRA5.700e-12977.78Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
F0Y8W5_AURAN1.930e-10867.25Proteasome subunit beta n=1 Tax=Aureococcus anopha... [more]
A0A7S2RSS8_9STRA3.710e-10867.54Proteasome subunit beta n=1 Tax=Rhizochromulina ma... [more]
A0A7S3ZJK1_9STRA2.640e-10665.40Proteasome subunit beta n=3 Tax=Pelagomonas calceo... [more]
A0A6S8AP70_9STRA2.000e-10264.32Proteasome subunit beta n=1 Tax=Aureoumbra lagunen... [more]
A0A7S3HPE8_9STRA1.430e-10065.33Proteasome subunit beta n=1 Tax=Spumella elongata ... [more]
A0A812X8W8_9DINO7.050e-9657.46Proteasome subunit beta n=1 Tax=Symbiodinium sp. K... [more]
A0A7S0SUY2_9STRA1.300e-9159.56Proteasome subunit beta n=1 Tax=Chromulina nebulos... [more]
A0A7S2S9Q9_9STRA1.640e-9158.23Proteasome subunit beta n=1 Tax=Eucampia antarctic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016295Proteasome subunit beta 4PIRSFPIRSF001213MCPcoord: 24..269
e-value: 1.7E-89
score: 297.3
IPR016295Proteasome subunit beta 4PANTHERPTHR11599:SF5PROTEASOME SUBUNIT BETA TYPE-4coord: 44..260
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 48..267
e-value: 1.9E-61
score: 209.4
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 50..260
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 53..236
e-value: 1.9E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 44..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..273
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.867
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 59..106
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 55..238
score: 38.117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7941contigEcto-sp13_S_contig7941:1890..5182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7941.19233.1mRNA_Ecto-sp13_S_contig7941.19233.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7941 661..5434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7941.19233.1 ID=prot_Ecto-sp13_S_contig7941.19233.1|Name=mRNA_Ecto-sp13_S_contig7941.19233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MLAHLLSSAAFFLLSPLVLSSMLCHSAAGPARGAGHAAAAMDGTRQHTSQ
PIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGA
SGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKF
NPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRK
KWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYK
VDTEWSLASFSQPKAGQDTDGSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016295Proteasome_beta4
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type