mRNA_Ecto-sp13_S_contig7941.19233.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7941.19233.1
Unique NamemRNA_Ecto-sp13_S_contig7941.19233.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: D8LRR1_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR1_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 4.230e-176
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 1 
Query:  316 MLCHSAAGPARGAGHAAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            MLCHSAAGPARGAGHA AAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW
Sbjct:    1 MLCHSAAGPARGAGHATAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 252
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A835Z5Q8_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q8_9STRA)

HSP 1 Score: 376 bits (965), Expect = 4.140e-122
Identity = 182/234 (77.78%), Postives = 204/234 (87.18%), Query Frame = 1 
Query:  373 MDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCK-KDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            MD  RQ T  PIVTGTSV+G+KYKDGVMLAADTLASYGSLARYK+VER++PVGE TL+GASGEYSDFQ IME LED  Q D NMDDGF+R+PAE+++ LR +MYNRRNK NPLWNYLLIAG   + G  FLGSVDHIGT YED+ILATGFG HLALPILR++WR D+EEGEARALLEDCMRVLFYRDCRALNRIQIAKAT EG +VSD Y ++T WSLA+F+QPKAG DTDGSW
Sbjct:   38 MDAPRQRTQSPIVTGTSVIGLKYKDGVMLAADTLASYGSLARYKSVERIRPVGESTLLGASGEYSDFQAIMEMLEDQTQEDRNMDDGFKRAPAEVHSYLRAVMYNRRNKMNPLWNYLLIAGVNPRTGGFFLGSVDHIGTAYEDDILATGFGAHLALPILRRRWRADMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATREGVLVSDPYTIETSWSLAAFAQPKAGADTDGSW 271
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: F0Y8W5_AURAN (Proteasome subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W5_AURAN)

HSP 1 Score: 323 bits (828), Expect = 5.360e-102
Identity = 154/229 (67.25%), Postives = 187/229 (81.66%), Query Frame = 1 
Query:  385 RQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            RQHTS+PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V+R+   G  TL+GASGE SD+  I+  LE   + ++N +DGFE SP EIY+ LR +MY  RNKFNPLWN L++ G K DG AFLGSVD  GT YED+++ATGFG HLALPI+R KW  D++EGEARALLEDC+RVLFYRDCRAL+ + ++KATA+GT+VSD YK++T+WS ASF  PKAG+D DG W
Sbjct:   24 RQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVQRISKTGSYTLVGASGEMSDYHAILRKLEGLERDNLNANDGFEHSPVEIYSYLRAVMYQARNKFNPLWNSLVVGGYK-DGKAFLGSVDLRGTAYEDDVIATGFGAHLALPIMRAKWHADIDEGEARALLEDCLRVLFYRDCRALDMVVLSKATADGTLVSDPYKIETDWSSASFVVPKAGEDGDGGW 251
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S2RSS8_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSS8_9STRA)

HSP 1 Score: 323 bits (828), Expect = 1.030e-101
Identity = 154/228 (67.54%), Postives = 188/228 (82.46%), Query Frame = 1 
Query:  388 QHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            QHT++PIVTGTSV+GIKYKDGVMLAADTLASYG+LA +K+VER+  V +  LIGA GEYSDFQ I + L+     D NMDDG + SP+EI++ LR +MY RRNK NPLWN++L+AG K +G +FLGSVD IGT +ED+ LATGFG +LA+PILRKKWRPDL+EGEARALLE+C+RVLFYRDCRALN+I++AKATAEG+V+SD Y ++T WS ASF   K G D DG W
Sbjct:   44 QHTTRPIVTGTSVIGIKYKDGVMLAADTLASYGTLAMFKDVERIHKVSDSCLIGAGGEYSDFQKIQQVLDRLTSEDRNMDDGHQTSPSEIFHYLRAVMYQRRNKMNPLWNHVLVAGFK-EGKSFLGSVDLIGTAFEDDFLATGFGSYLAIPILRKKWRPDLDEGEARALLEECLRVLFYRDCRALNKIRLAKATAEGSVISDPYTLETSWSAASFQTVKGGLDADGGW 270
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S3ZJK1_9STRA (Proteasome subunit beta n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJK1_9STRA)

HSP 1 Score: 318 bits (816), Expect = 6.640e-100
Identity = 155/237 (65.40%), Postives = 188/237 (79.32%), Query Frame = 1 
Query:  361 AAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            A AA    RQHTS+PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V R+   G  TL+GASGE SD+  +++ L+   Q + N DDGFE  PAEIY+ LR ++Y RRNKF+PLWN L++ G K DG  FLGSVD  GT YED+++ATG+G HLALPI+R KW PDL+EGEARALLEDC+RVLFYRDCRAL+ + ++KATA GT+VSD YK++T+W+ ASF  PKAG D DG W
Sbjct:   37 ATAAEAPARQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVTRIARTGSYTLVGASGELSDYHALLDKLKGLAQANANCDDGFEHGPAEIYSYLRAVLYQRRNKFDPLWNSLVVGGFK-DGAPFLGSVDLRGTAYEDDVIATGYGSHLALPIMRAKWTPDLDEGEARALLEDCLRVLFYRDCRALDTVVLSKATATGTLVSDPYKLETDWTSASFVAPKAGGDGDGGW 272
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A6S8AP70_9STRA (Proteasome subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8AP70_9STRA)

HSP 1 Score: 308 bits (789), Expect = 3.970e-96
Identity = 146/227 (64.32%), Postives = 178/227 (78.41%), Query Frame = 1 
Query:  391 HTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            HT +PIVTGTSVLG+KYKDG+M+AADTLASYGSLA +K V R+ P G  TL+G SGE SDF HI+  LE+  + ++N DDGFE  PAEIY  LRT+MYNRR+K NPLWN L++ G  KDG +FLG VD  GT Y D+++ATG+G HLA+P++R KWRP LEEGEAR LLEDC+RVLFYRDCRAL+ I ++KAT +GT+VS  YK+ T+WS ASF  PKA  D DG W
Sbjct:   32 HTQRPIVTGTSVLGLKYKDGIMMAADTLASYGSLAMFKEVTRIAPAGTNTLVGGSGEMSDFHHILRLLEELGRENLNADDGFEHPPAEIYRYLRTVMYNRRSKLNPLWNQLVVGG-HKDGESFLGVVDLRGTAYTDDVVATGYGAHLAMPVMRNKWRPGLEEGEARNLLEDCLRVLFYRDCRALDTIILSKATDQGTLVSPPYKLTTDWSSASFVVPKADDDGDGGW 257
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S3HPE8_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPE8_9STRA)

HSP 1 Score: 303 bits (776), Expect = 2.530e-94
Identity = 147/225 (65.33%), Postives = 183/225 (81.33%), Query Frame = 1 
Query:  358 HAAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASF 1032
            HAA +      HT+QPIVTGT+V+GIKY  GVMLAADTLASYGSLARYK+V RLK VGE TLIGASGE SDFQ IME L+  +Q D+N DDG++RSP+E +N LR I+Y +R K NPLWN LL+AG  K+   FLG VD IGT YE+N +ATGFG +LA+P++R+KW  +++EGEAR+LLEDC+RV+FYRDCRALNRIQIAKA+A+GT+VS+ Y++ TEW  A+F
Sbjct:   11 HAALSPHAPTTHTTQPIVTGTTVIGIKYNGGVMLAADTLASYGSLARYKDVRRLKQVGENTLIGASGEISDFQTIMEMLDSMNQSDINEDDGYKRSPSEYFNYLRAILYQKRGKGNPLWNQLLVAGFHKEAP-FLGYVDLIGTAYEENFIATGFGAYLAIPLIREKWYAEMDEGEARSLLEDCLRVMFYRDCRALNRIQIAKASADGTLVSEPYEISTEWETANF 234
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A812X8W8_9DINO (Proteasome subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X8W8_9DINO)

HSP 1 Score: 291 bits (745), Expect = 9.260e-90
Identity = 131/228 (57.46%), Postives = 180/228 (78.95%), Query Frame = 1 
Query:  388 QHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            +HT+QPIVTGTSV+ IKYKDGVM+AADTL SYG LAR+ ++ RLK VG+ TLIG SGEYSDFQ+I+  L++  + D N++DG E +  E++N L  +MYNRRNK NPLWN +++AG + DG A LG+VDHIGT Y ++ + TGFGGH+A+P++R+ W+PD+ E +ARAL+E+CM++L+YRDCR +N+I +AK TAEG +VS+ + + T+W   SF + KAG DT GSW
Sbjct:   22 KHTTQPIVTGTSVIAIKYKDGVMMAADTLGSYGGLARFTDLRRLKVVGKSTLIGCSGEYSDFQYILSLLDELVEEDANVEDGRELTAEEVHNYLTRVMYNRRNKGNPLWNSIVVAGVE-DGVATLGTVDHIGTAYTEDFIVTGFGGHMAIPLIRESWKPDMSESDARALVEECMKILYYRDCRTINKITLAKITAEGGMVSEPFTLATKWDFQSFIKAKAGADTGGSW 248
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S0SUY2_9STRA (Proteasome subunit beta n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUY2_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.270e-85
Identity = 134/225 (59.56%), Postives = 169/225 (75.11%), Query Frame = 1 
Query:  394 TSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGS 1068
            T+QPIVTG+SVLGIKYKDGVMLAADTLASYGSLARYKN++R++ V   TLIGASGE SDFQ I E L    Q D+N DDG+ +SP EI+N LR ++Y RR K NPLWN LLIAG +K    FLG VD IGT Y++N +ATG+G +LA+P++R++W  DL E EA+ LLE+C+RVLFYRDC+A NRI I+KAT +G  +S+ Y++   W  A+F        +DGS
Sbjct:   23 TTQPIVTGSSVLGIKYKDGVMLAADTLASYGSLARYKNIKRIEKVNNSTLIGASGEISDFQSISEMLSSIEQDDINQDDGYTKSPIEIFNYLRAVLYQRRGKGNPLWNQLLIAGYRKGQEPFLGYVDLIGTSYQENFIATGYGAYLAIPLIRERWHKDLSEDEAKKLLEECLRVLFYRDCKASNRIIISKATIDGVSISEPYEITHNWETATFDARHPTSGSDGS 247
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BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Match: A0A7S2S9Q9_9STRA (Proteasome subunit beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9Q9_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.610e-85
Identity = 145/249 (58.23%), Postives = 173/249 (69.48%), Query Frame = 1 
Query:  343 ARGAGHAAAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIME-----TLEDYHQYDVNMD-DGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 1071
            A G  +  AA       T++PIVTGTSVLGIKY  GVMLAADTL SYG +A+YK+  RL  V   TLIG  GEYSDF  + E      LED    D   D D       E++N LR +MYNRRNK NPLWN LL+AG   +G  FLG VD IGT YEDNI+ATGFG +LA+P++R+K+RPD+EEGEARALLEDCMRVLFYRDCRALNRIQIAKAT +  ++SD Y+++T W  A + +PK   D DG W
Sbjct:    8 AGGVSNVRAASLSATDRTTRPIVTGTSVLGIKYAGGVMLAADTLCSYGGMAKYKDARRLVDVNGKTLIGGGGEYSDFTAVCELLKRNALEDKCTSDSLYDEDNTHGCAREVWNYLRAVMYNRRNKMNPLWNELLVAGYSSEGQPFLGYVDKIGTTYEDNIVATGFGSYLAMPLMREKYRPDMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATPDEVLISDPYELETNWDSAEYMKPKGQLDGDGGW 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7941.19233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRR1_ECTSI4.230e-17699.60Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A835Z5Q8_9STRA4.140e-12277.78Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
F0Y8W5_AURAN5.360e-10267.25Proteasome subunit beta n=1 Tax=Aureococcus anopha... [more]
A0A7S2RSS8_9STRA1.030e-10167.54Proteasome subunit beta n=1 Tax=Rhizochromulina ma... [more]
A0A7S3ZJK1_9STRA6.640e-10065.40Proteasome subunit beta n=3 Tax=Pelagomonas calceo... [more]
A0A6S8AP70_9STRA3.970e-9664.32Proteasome subunit beta n=1 Tax=Aureoumbra lagunen... [more]
A0A7S3HPE8_9STRA2.530e-9465.33Proteasome subunit beta n=1 Tax=Spumella elongata ... [more]
A0A812X8W8_9DINO9.260e-9057.46Proteasome subunit beta n=1 Tax=Symbiodinium sp. K... [more]
A0A7S0SUY2_9STRA1.270e-8559.56Proteasome subunit beta n=1 Tax=Chromulina nebulos... [more]
A0A7S2S9Q9_9STRA1.610e-8558.23Proteasome subunit beta n=1 Tax=Eucampia antarctic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7941contigEcto-sp13_S_contig7941:661..5434 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score516.2
Seed ortholog evalue9.7e-144
Seed eggNOG ortholog2880.D8LRR1
Preferred namePSMB4
Model size2303
KEGG koko:K02736,ko:K05542,ko:K18740
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categorychloroplast
GOsGO:0000226,GO:0000502,GO:0001530,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005840,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007098,GO:0007346,GO:0008150,GO:0008152,GO:0008233,GO:0008289,GO:0009056,GO:0009057,GO:0009628,GO:0009651,GO:0009896,GO:0009987,GO:0010035,GO:0010038,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016043,GO:0016579,GO:0016787,GO:0019538,GO:0019774,GO:0019941,GO:0022402,GO:0022607,GO:0022626,GO:0030071,GO:0030163,GO:0031023,GO:0031331,GO:0031347,GO:0031348,GO:0031597,GO:0031974,GO:0031981,GO:0031984,GO:0032101,GO:0032102,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034622,GO:0036211,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043248,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046686,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065003,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080134,GO:0090068,GO:0097367,GO:0098827,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
Exons7
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsKOG0185@1,KOG0185@2759
EC1.3.1.88,3.4.25.1
Cds size822
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03016,ko03019,ko03051
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7941.19233.1prot_Ecto-sp13_S_contig7941.19233.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7941 1890..5182 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464065.7958686-UTR-Ecto-sp13_S_contig7941:660..18891681464065.7958686-UTR-Ecto-sp13_S_contig7941:660..1889Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7941 661..1889 -
1681464065.9043725-UTR-Ecto-sp13_S_contig7941:5182..54341681464065.9043725-UTR-Ecto-sp13_S_contig7941:5182..5434Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7941 5183..5434 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464065.809803-CDS-Ecto-sp13_S_contig7941:1889..19611681464065.809803-CDS-Ecto-sp13_S_contig7941:1889..1961Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7941 1890..1961 -
1681464065.8235946-CDS-Ecto-sp13_S_contig7941:2304..24191681464065.8235946-CDS-Ecto-sp13_S_contig7941:2304..2419Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7941 2305..2419 -
1681464065.840547-CDS-Ecto-sp13_S_contig7941:2810..29151681464065.840547-CDS-Ecto-sp13_S_contig7941:2810..2915Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7941 2811..2915 -
1681464065.8538685-CDS-Ecto-sp13_S_contig7941:3304..33941681464065.8538685-CDS-Ecto-sp13_S_contig7941:3304..3394Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7941 3305..3394 -
1681464065.868198-CDS-Ecto-sp13_S_contig7941:3724..38921681464065.868198-CDS-Ecto-sp13_S_contig7941:3724..3892Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7941 3725..3892 -
1681464065.877764-CDS-Ecto-sp13_S_contig7941:4364..44451681464065.877764-CDS-Ecto-sp13_S_contig7941:4364..4445Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7941 4365..4445 -
1681464065.8908796-CDS-Ecto-sp13_S_contig7941:4991..51821681464065.8908796-CDS-Ecto-sp13_S_contig7941:4991..5182Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7941 4992..5182 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7941.19233.1

>prot_Ecto-sp13_S_contig7941.19233.1 ID=prot_Ecto-sp13_S_contig7941.19233.1|Name=mRNA_Ecto-sp13_S_contig7941.19233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MLAHLLSSAAFFLLSPLVLSSMLCHSAAGPARGAGHAAAAMDGTRQHTSQ
PIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGA
SGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKF
NPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRK
KWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYK
VDTEWSLASFSQPKAGQDTDGSW*
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mRNA from alignment at Ecto-sp13_S_contig7941:661..5434-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7941.19233.1 ID=mRNA_Ecto-sp13_S_contig7941.19233.1|Name=mRNA_Ecto-sp13_S_contig7941.19233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7941:661..5434- (Ectocarpus species13 EcNAP12_S_4_19m)
AGTCGATCAGGCAGCCCCTGACAGAGCCAATCGAGGACGCTCGAGATGAG
GGAGAACCTTGGCGGTGCACGCACGGGGTAGCGTGGGCGTCTCCACGAGC
GTGGAGTTGTAGAGTAGAGAGAGGTAAACAGACAGACAGCCGCGAGGGTA
CGGGTTTAATACACGCCAGCTCAAGCTAACCCCTCCCGTACACTCCCTGC
CGCGTGCTCGGTGTCTTGTTGCGCATTTGTCGCAGCTTTTAAAAGTCGTT
GCATGCTCGCACACTTGCTTTCTTCTGCAGCTTTCTTCCTGCTTTCACCC
CTGGTTTTGTCGAGCATGCTCTGCCACTCCGCTGCCGGTCCCGCTCGAGG
AGCGGGGCACGCCGCGGCCGCGATGGACGGCACAAGGCAGCACACGTCAC
AGCCAATCGTCACGGGTACTTCGGTTCTGGGCATCAAGTACAAGTGAGGT
CTACAAGGATAGTAGCGTAGAGCTGCCACGACAATCGTTCGTTTCCGATC
TGTTGTAGACATGGTGCGATCGATTGCGGCGGTGGATAAAAGAAGGAACC
GAGTCGGTGCGATCGGTGTCGCGTTCGGGCTGTTCGCATATCTCTACCGC
CGTTGCGCGGGCCATCGATGGAGGCAACTTGAAAATATACGTTCCAAAGT
TTGAGTCTAGCAGTCTGAAGCAGAAGTCTATTTCTTGTGCTCTGGCAGAT
ACCGGCCTTCCGTATCAGCCTGTCTCGCAAAGTCGACAGCACCAACCGCC
AGCCGTGCTCTCGAGAGATTGCTCGGGCTTTGCCGGGGAAGATCTGAACG
TAGAGCACGAGCGTAGGGGATCGTCACGCTCTAAAGCCAGTACAGTACAC
GGTGCGAAGGAAAGCTGATCACCACGGCCTATGTAATTTAGCACGCGTGC
GATCTCTAGCGCATGCAGAGGCCAAGGTGGAGTGAAATTTAATGCCCTCT
CGTGTGTATGGTGGCCCCCGTTGTTTTGGTGACGGGCAGGGACGGAGTGA
TGCTGGCGGCGGACACCTTGGCGTCGTACGGCAGCTTGGCCCGCTACAAG
AACGTCGAACGCCTCAAACCGTGAGTTCTTTTATGAGATTCATGCCTACT
TTTTTACAGTGCTGCGGGCGGGTGCTCCCCACAGCACCGCCTTGATAGCT
GAGTTTGATGTCAGGGATGCCTGGTTTTTGTCGTTTTGGGGCGGGGCGAT
GCGTTCGATAGTCGGTGTTGGTGTCGTTTTAGGAAACATCGAATTCGTTG
TCATGTGCGTCTATGCGTGAAGGTGTGTCCCGACATGTGATGCTGCTGCG
TTCATCGCGTGTACGTCGTGATGTCAGTGAGCATCGAAGTTCTTCGTTTT
ATGCATACAAGCAATTTTCGGGCAAAGGCCGCAACGTGTCGATACCTGGG
CCACCTGTCTCCGTTCATCTATCCATGTCGTGTTGATATTTCTCCGTCGG
GTCGGTAGATATGATTCGCAACTATAACAAACTGTAAGTAAGCTATCGCT
GGTGAACACTTTTTGGATGACTTTACTCTTCTTTTGGTGCAGGGTGGGTG
AGTGCACGCTGATCGGGGCTTCTGGGGAGTACTCGGACTTCCAGCACATC
ATGGAGACCCTCGAAGATTACCATCAGTACGACGTCAACATGGACGACGG
CTTCGAGAGGAGTCCCGCAGAGATCTACAACCTGCTGAGGACCATCATGT
ACAACCGCAGGTGAGCCTTCGCTGCTTTCTTGCTCCACTCCACATGCTGG
CATATTTCGTGACGTGTTTCTCGACCAACAGTAGCTGGCTGCCTGGCTGA
ATGGCTGAATTGAGTTCGGGCCACACCTAGCCATGACCACATGTGTGTGC
GTGGCAGCTGTTTGGTGGAACCGACTGCACTGTCAAGCTTCCATGGTGCA
AAATTGGAGGGTGATACTTCGCCCCATGCGGTCGCTCTGTGTTCCATGTG
GATATCGGTGTGGGTGTTCTTTGTTTCACGAAAACCATCTCCGTGCGTCC
GTCCTGTGTTTCCATCTGTCGCGTCTCTCACGGCATACAGAAACAAATTC
AACCCGCTGTGGAACTACCTGCTCATCGCCGGCTGCAAGAAGGACGGCAC
CGCTTTCCTTGGCTCTGTTGACCACATCGGGTGAGAAATCAGCTGTAGGA
GTATCCCTTCTACGAAGCACCATCTTGTTGAGGATTCACAAGTGAGCAGG
GGAACGAATGGCAGTGTCGATGTCGCGCCGGTGTATTACATGAAGCGATG
TGCACTGAAATTGTGTGCAGGGGTCATGGAGTGATGCAGAGTTTTGAAGG
CAGCAACGCCAGGGCTCATTTTTCTAGCTTGTCATTTGGCGACGGAAGAT
CGACCGGAGATGTCTCTTGTGTGCGCATCAAGTGTCTAATCGTGACAAGT
GCGTGGTTTCTTCCTGGACTCCCCTGCCGTGCATGGTCGTTTCCACATGC
ATGCCTTAATATCTGTCCCTAAATTGAGATGCTGACGTTCACGTTGTTGG
GGTTTGCTCGCAATGACAGGACTTGCTATGAGGACAACATTCTGGCCACG
GGTTTCGGTGGACACCTGGCGCTGCCCATCCTTCGCAAGAAGTGGAGGCC
GGACCTGGAGGAGGGAGAGGCTAGGTGAAAGCTAGGAACAATCCAATGCA
AAGCTCGGTTTGGTCGCTGTGTGAAATCGAAACGGGCTGAGTAGTTTTTT
GACGGAATTTCAACAACGAGATCCGTCCTGGTTTGGTGAAAACGGTTAAA
GGTGTTTCTCGTCACCGTGTATGTTATCAGTTTGATTCCAGACCTTCGAC
ATCGAGAAATATTTTAGGTGTATCCACTGGCTGATTATTTCAAGGCACCG
ACCTATGAACCAAATCTGGGGGATTGATGCAAAATAGGCATTGCAGAATG
AGGACATAGCACCTACCATTAGAGGTCGACGAGATCCGTGTTTCTCGCCT
CGTCCCTGTCACCTCAGTCTGTCCTGTGGTGTTTTTGCGTGCGGTCGTTT
GATGTGTAATGACAGGGCTTTGCTGGAGGACTGCATGCGGGTGCTCTTCT
ACCGCGATTGCCGGGCGCTGAACCGGATCCAGATCGCGAAGGCCACCGCG
GAGGGTACGGTCGTCAGCGACGCGTACAAGGTGAGCAGCACGGCAGCACA
TCCGTGGAGAGTTGCTCGCTCATCTTAAACGTTTCGCATGCGCGAGGTTA
CTCCTGTGGAACACGTCCTTATGCCGTCGTTTGCCATTGGTGTTGATGTC
GATGGTCCTTTGAGACGCACCAGACTGCTGTGTCAAACATCCTTCTCACG
TGGAGGCCAAACTCCCATCCAACAGCTGAAGAGGTATCACCGGAAATGGT
TGCCCGTTTGTCGACCTGCCTCCTCGTCACGGGTCATCCCTACCTTCCCG
CACCGCTACAGTATCGAGGTTGACCCCGTGCTTTCTTCTCTACATGCAAT
TCTTGTTTGCCGTTTTCTCGCAGGTGGACACAGAATGGAGCTTGGCCTCG
TTTAGCCAGCCGAAGGCCGGGCAGGATACTGACGGGAGCTGGTGATGATG
ACATGTCGAGTTTGTTTAGGAAGGCCGGACGGGCTTGGGGGAAGTCGCGC
GTGGGTTGCCCGCAGGGTGTTGCAGGCGTGGTGCTGATGACCATCTGGCG
GCAGATTTCCAGTGCAAACGATGCATCCTCGTCGAAATGACGCCATCGAT
TGTTTTTCCCAGGGAGGGAGGACATAGGTAGGTGTGACTGCTCCGTCACT
CCTGCTGTTGCCTGTTGGAACAGGCTCTGACGATGCAGGCACCGATTTTG
GTCGGCCGACATTCGGACGGCATCTTCCTTGGCACTACTGCTGTGTTGTT
GTAGTGGACAAATAGTGTGTGGGTAGCGCGGGCAAAATAACCAAACCACG
TGGCCGGAGTGCCAACTGTAACTATCACTTCTGCCGTTATGATGAAGGGA
TAAACCTCTCCACCCTGCTGTCGTACATGGAAGATAAAGATTGGTATACA
ACGCCCTAAGCCGCAGATACCCCCTTTGACACTGAAGTATACCAAAGCAA
GTATAGACACCCTCGTCGGTGGCCTCGGGCCTTTGCTTTGCTTCTAACAC
TCTCACTGACCTCTCATCTGCACAAGCAACCCGTGGTTATACCACGAGCA
CATGCAACCTCACCGAGATCTTACTCGGGTAGTGCAGCCCTACCCCGGAT
ACAGAAAGATGGAGTCCCACATTTCCCAATGCTGCTGTTGATGCACTTAA
TTGGTACAAGTTGGGGGTAACTAGCTGTCCACATGAACAACAGTCGCATG
GCGTCCATGTGCTTCTTTAGAGCTGAACCACTGGAGCGCTCAGCGGTCGG
GTTTCGTAGACTGTGCTTACTCCACGGAGATGGTTTTCCCAGATGCGGAG
CGATAAATACGATCGTTGACTGCAGCCGCCAAATCGCCGTTGCTTGTGCT
CGGGAGACCTGTTCCAGTCACAAGAACAGCATCACAGGCAAAAGGTTGTA
GTGGGTCACACGCGTTCAACTGTGTGGGCGCTGGCGAACCGGCGAACTTA
AAACCTGCAGTAATGAAGTCAAACCTACTTAATACTCCTCTCGTCCGGTG
TGGGCGTGACCACACAACCTACAAAATCGTGGGCGACAAATCACACTGGG
GTTATTCAGACAGCGACTGCTGTCTGTGAACAGATGCAAATCTCGCTGGT
GCCAACCTCATTTGGCGAAACAAAATCAACAGCATCCCGGGAGCTTGAAA
AATCAACAAGGTGTCCTTTTCGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7941:661..5434-

>mRNA_Ecto-sp13_S_contig7941.19233.1 ID=mRNA_Ecto-sp13_S_contig7941.19233.1|Name=mRNA_Ecto-sp13_S_contig7941.19233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7941:661..5434- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCGCACACTTGCTTTCTTCTGCAGCTTTCTTCCTGCTTTCACCCCT
GGTTTTGTCGAGCATGCTCTGCCACTCCGCTGCCGGTCCCGCTCGAGGAG
CGGGGCACGCCGCGGCCGCGATGGACGGCACAAGGCAGCACACGTCACAG
CCAATCGTCACGGGTACTTCGGTTCTGGGCATCAAGTACAAGGACGGAGT
GATGCTGGCGGCGGACACCTTGGCGTCGTACGGCAGCTTGGCCCGCTACA
AGAACGTCGAACGCCTCAAACCGGTGGGTGAGTGCACGCTGATCGGGGCT
TCTGGGGAGTACTCGGACTTCCAGCACATCATGGAGACCCTCGAAGATTA
CCATCAGTACGACGTCAACATGGACGACGGCTTCGAGAGGAGTCCCGCAG
AGATCTACAACCTGCTGAGGACCATCATGTACAACCGCAGAAACAAATTC
AACCCGCTGTGGAACTACCTGCTCATCGCCGGCTGCAAGAAGGACGGCAC
CGCTTTCCTTGGCTCTGTTGACCACATCGGGACTTGCTATGAGGACAACA
TTCTGGCCACGGGTTTCGGTGGACACCTGGCGCTGCCCATCCTTCGCAAG
AAGTGGAGGCCGGACCTGGAGGAGGGAGAGGCTAGGGCTTTGCTGGAGGA
CTGCATGCGGGTGCTCTTCTACCGCGATTGCCGGGCGCTGAACCGGATCC
AGATCGCGAAGGCCACCGCGGAGGGTACGGTCGTCAGCGACGCGTACAAG
GTGGACACAGAATGGAGCTTGGCCTCGTTTAGCCAGCCGAAGGCCGGGCA
GGATACTGACGGGAGCTGGTGA
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