prot_Ecto-sp13_S_contig79402.19232.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig79402.19232.1
Unique Nameprot_Ecto-sp13_S_contig79402.19232.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig79402.19232.1 vs. uniprot
Match: A0A6H5KFP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP4_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.030e-54
Identity = 155/173 (89.60%), Postives = 160/173 (92.49%), Query Frame = 0 
Query:   27 TSASYGVMGKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQTRGSVQRKMASATSRNAVPHDDIEEESDEKPAVRGDGRRASDPPVLGEEEEGGVGASLAGSDEENGPVSMAADEHSNSWSDPRLPVAATRDGGVWDLRGPGGVGSS 199
            TSASYGVMGK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQ +GS+QRK ASATS NA PHDDIEEESDEKPAVRGDGRRASD  VLG+EEEGGVGAS AGS EE GPVSMAADEH+NSWS+PRLPVAATRDGGVWDLRGP GVGSS
Sbjct:  128 TSASYGVMGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQKKGSIQRKKASATSNNAGPHDDIEEESDEKPAVRGDGRRASDASVLGKEEEGGVGASFAGSAEEKGPVSMAADEHNNSWSEPRLPVAATRDGGVWDLRGPRGVGSS 300
[Close]
BLAST of mRNA_Ecto-sp13_S_contig79402.19232.1 vs. uniprot
Match: D7FWU8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU8_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.550e-24
Identity = 119/147 (80.95%), Postives = 120/147 (81.63%), Query Frame = 0 
Query:   26 FTSASYGVMGKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQTRGSVQRKMASATSRNAVPHDDIEEESDEKPAVRGDGRRASDPPVLGEEEEGGVGASLAGSDEENGPVSMAADEHSNSW 172
            FTSASYGVMGK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQ RGSVQRK  SA      PHDD+EEESDEKPAVRGDGRRASDP VLGEEE GGVG S A S EENGP    A    N W
Sbjct:  176 FTSASYGVMGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQKRGSVQRKKPSAG-----PHDDVEEESDEKPAVRGDGRRASDPSVLGEEEGGGVGTSFARSAEENGPTGGRAGS-GNRW 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79402.19232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFP4_9PHAE1.030e-5489.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU8_ECTSI1.550e-2480.95EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig79402contigEcto-sp13_S_contig79402:1..606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig79402.19232.1mRNA_Ecto-sp13_S_contig79402.19232.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig79402 1..606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig79402.19232.1 ID=prot_Ecto-sp13_S_contig79402.19232.1|Name=mRNA_Ecto-sp13_S_contig79402.19232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
RRFCSKHAEDDMVKLDKKLCPVKGCFTSASYGVMGKKRKFCAVHAERGMV
SIGGRRCAKEDCGKRANYGVAGTNKREFCATHAEAGMVNINNQTRGSVQR
KMASATSRNAVPHDDIEEESDEKPAVRGDGRRASDPPVLGEEEEGGVGAS
LAGSDEENGPVSMAADEHSNSWSDPRLPVAATRDGGVWDLRGPGGVGSSS
GG
back to top