prot_Ecto-sp13_S_contig7936.19226.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7936.19226.1
Unique Nameprot_Ecto-sp13_S_contig7936.19226.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length226
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7936.19226.1 vs. uniprot
Match: D7FXZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ6_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 7.420e-90
Identity = 181/229 (79.04%), Postives = 187/229 (81.66%), Query Frame = 0 
Query:    1 MPRIVDLEDEPLDGDDYGGSEGHGYDDEYDDS-TADGNSLD-DEGATGIGRAANGGSSGAAAPVTLPESEYRESLGFLRASRKLALPGAGFDAADDGRIVALAALDRFGLLLVSSATGILVYAIEDLSSAAFGRGGQQXXXXX-DPALPVPVRADVALAGRPSRMLASRDNLRVAVAVGDKVLVFDTASLVNSGGGGAXXXXXXXXXXXXXXXXXXXXXXXLPPRALSW 226
            MPRIV+LEDEPLDGDDYGGS  HGYDDEYDDS TADGNSLD DE A G G AANGGSS AAAPVTLPESEYRESLGFLRASRKLALPG GFDAADDGR+VALAALDRFGLLLVSSATGILVYAIEDLSSAAFG+GGQ XXXXX DPA PVPVRADVALAGRPSRM+ASRDNLRVA+AVG+KVLV DTASLVN     A                       LPPRALSW
Sbjct:    1 MPRIVELEDEPLDGDDYGGSGDHGYDDEYDDSSTADGNSLDGDEEAAGTGSAANGGSSSAAAPVTLPESEYRESLGFLRASRKLALPGTGFDAADDGRVVALAALDRFGLLLVSSATGILVYAIEDLSSAAFGQGGQXXXXXXXDPASPVPVRADVALAGRPSRMVASRDNLRVAIAVGNKVLVLDTASLVNGAAAAAAPVATVALSSPDAGDSGD-----LPPRALSW 224
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7936.19226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXZ6_ECTSI7.420e-9079.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7936contigEcto-sp13_S_contig7936:1172..4034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7936.19226.1mRNA_Ecto-sp13_S_contig7936.19226.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7936 1141..4034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7936.19226.1 ID=prot_Ecto-sp13_S_contig7936.19226.1|Name=mRNA_Ecto-sp13_S_contig7936.19226.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
MPRIVDLEDEPLDGDDYGGSEGHGYDDEYDDSTADGNSLDDEGATGIGRA
ANGGSSGAAAPVTLPESEYRESLGFLRASRKLALPGAGFDAADDGRIVAL
AALDRFGLLLVSSATGILVYAIEDLSSAAFGRGGQQQQQQQDPALPVPVR
ADVALAGRPSRMLASRDNLRVAVAVGDKVLVFDTASLVNSGGGGAAAAPA
APVATVALSSPDAGDAGDLPPRALSW
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