prot_Ecto-sp13_S_contig12295.1922.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12295.1922.1
Unique Nameprot_Ecto-sp13_S_contig12295.1922.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length342
Homology
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: A0A6H5L263_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L263_9PHAE)

HSP 1 Score: 613 bits (1580), Expect = 8.150e-219
Identity = 321/344 (93.31%), Postives = 328/344 (95.35%), Query Frame = 0
Query:    1 MTSYGKQRYWGLLRFILATAVGSIDLGAAVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGPTSTTAVASATAVKQAAGELDFGGAAPPSRTRAHSGVSRGMPLAVSRQPPRGEILEAVTTTAPATATA--AAGEEDLPSAALISRSEKDDPSGCTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP 342
            MTSYGKQR WGLLR +LA A+GSIDLGAAVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGP STTAVASATAV +AAGELDFGGAAPPSRTRAHSGVSRGMPLAVSRQPPRGEILEAV+TTA AT     AAGEEDLPSAALISRSEKDDPSGCTFETKVLNAQ AGFSM +VYDSREENLFKMGRSSSKGAKHPKVEIPLVLV+HASGLALKALIET SDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDK+R  P
Sbjct:    1 MTSYGKQRQWGLLRVVLAMAIGSIDLGAAVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGPLSTTAVASATAVNEAAGELDFGGAAPPSRTRAHSGVSRGMPLAVSRQPPRGEILEAVSTTAAATXXXXXAAGEEDLPSAALISRSEKDDPSGCTFETKVLNAQGAGFSMVIVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVSHASGLALKALIETASDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLP 344          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: A0A835Z7P9_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.590e-39
Identity = 91/199 (45.73%), Postives = 126/199 (63.32%), Query Frame = 0
Query:  147 AAGEEDLPSAALISRSEKD----DPSGCTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDPFG-MFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTN--RPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKV 338
            A G+ D+P  ALISRS +     DP  CTF  KV NA  AG ++AVV+D  +E LF+M R++  G      +IP VL++ +SG  L AL    +D  GP V+VD +DP+  MF ++++TM  +V GFL +LL C S+ + T HR LRRY+++       RP+SL + L++PE  V  G  LE DSC +CLEAYR+GDKV
Sbjct:   77 AVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRAT--GGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKV 273          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: A0A6P7Z5X0_9AMPH (RING-type E3 ubiquitin transferase n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7Z5X0_9AMPH)

HSP 1 Score: 62.8 bits (151), Expect = 2.570e-7
Identity = 50/174 (28.74%), Postives = 83/174 (47.70%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTD-PFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP 342
            C F+ KVLNAQ AG+  A++++   ++L  MG + ++  K  K++IP V +   S  +LK   E T +  G  V +     P   +    L  F+++ G  L L+    +      R+  R   L           ++ +LP  + ++G   E D CP+CL+ Y  GDK+R  P
Sbjct:  102 CNFDVKVLNAQNAGYKAAIIHNVASDDLLSMGSTDAELLK--KIDIPSVFIGETSANSLKN--EFTFEKGGHIVLLPEVSLPLEYY----LIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRLCKD--------QLKKLPIHKYKKGD--EYDVCPICLDEYEEGDKLRLLP 257          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: UPI00186458B0 (E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186458B0)

HSP 1 Score: 62.8 bits (151), Expect = 2.770e-7
Identity = 51/173 (29.48%), Postives = 88/173 (50.87%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP 342
            C F+ KVL+AQ AGFS A+VY+   + L  MG +     +  ++EIP V  ++ +   LKA +      RG   YV     F   ++  L  F  V G ++ ++   +++++   +Y +R        NR +S  ++ ++P  + ++G   E D C +CL+ Y  GDK+R  P
Sbjct:  103 CNFDVKVLHAQQAGFSAAIVYNVHSDILLNMGFNDESIVQ--QIEIPSVFTSYTASQLLKAYVIPD---RG--AYVILRPEFSFPLSYYLIPFTGVVGIIILVMV--TVLIIRCVQYRKRMRR-----NR-LSREQLKKIPVHKFKKGD--EYDVCAICLDEYEDGDKLRILP 258          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: UPI00186426D7 (E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186426D7)

HSP 1 Score: 62.0 bits (149), Expect = 4.690e-7
Identity = 52/173 (30.06%), Postives = 84/173 (48.55%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP 342
            C F+ KVL+AQ AGFS A+VY+   + L  MG S  K A+  +++IP V  ++++   LK+ I      RG   YV     F   +   L  F  V G +L ++   ++++V   +Y  R               ++ ++P    E+G   E D C +CL+ Y  GD++R  P
Sbjct:  103 CNFDIKVLHAQRAGFSAAIVYNMYSDTLLHMGFSDEKIAE--EIQIPSVFTSYSAAQILKSFIIPE---RG--AYVILRPAFYFPIWYYLIPFSWVVGIILVVMV--TVLIVRCVQYRNRMXXXXXXXE------QLKKIPVHTFEKGD--EYDVCAICLDEYEGGDRLRILP 258          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: A0A8C9VSH5_SCLFO (RING-type E3 ubiquitin transferase n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VSH5_SCLFO)

HSP 1 Score: 62.0 bits (149), Expect = 4.890e-7
Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP 342
            C F+ KVL+AQ AGFS A+V++ + + L  MG S+   A   ++EIP V   + +   LK  I   S       YV     F   ++  L  F  V G ++  LT  ++++V   ++ +R     A  NR ++  ++ ++P  + ++G   E D C +CL+ Y  GDK+R  P
Sbjct:  101 CNFDIKVLHAQQAGFSAAIVHNVQSDRLLSMGSSNETIAD--EIEIPSVFTGYTAAQDLKKYIIGESG-----AYVVLWPEFSFPLSYYLIPFSGVMGMII--LTMVTILIVRCVQHRKR-----ARRNR-LTKEQLKKIPIHKFKKGD--EYDMCAICLDEYEDGDKLRILP 256          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: A0A8C9RVC1_SCLFO (Profilin n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RVC1_SCLFO)

HSP 1 Score: 62.0 bits (149), Expect = 5.860e-7
Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP 342
            C F+ KVL+AQ AGFS A+V++ + + L  MG S+   A   ++EIP V   + +   LK  I   S       YV     F   ++  L  F  V G ++  LT  ++++V   ++ +R     A  NR ++  ++ ++P  + ++G   E D C +CL+ Y  GDK+R  P
Sbjct:  101 CNFDIKVLHAQQAGFSAAIVHNVQSDRLLSMGSSNETIAD--EIEIPSVFTGYTAAQDLKKYIIGESG-----AYVVLWPEFSFPLSYYLIPFSGVMGMII--LTMVTILIVRCVQHRKR-----ARRNR-LTKEQLKKIPIHKFKKGD--EYDMCAICLDEYEDGDKLRILP 256          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: A0A150H1R6_GONPE (RING-type domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H1R6_GONPE)

HSP 1 Score: 61.6 bits (148), Expect = 8.830e-7
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  157 ALISRSEKDDPSGCTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALI 232
            ALI+R ++  PS CTF+ KV+NAQAAG   A+VYD   E+L  M    SK   HP  +IP V ++  +G+ +K L+
Sbjct:   53 ALIARQQQVYPSNCTFDIKVMNAQAAGAMAAIVYDDLYESLIIM----SKPKGHPDPDIPSVFMSQKAGMIMKKLM 124          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: UPI001F0755EE (E3 ubiquitin-protein ligase RNF167 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F0755EE)

HSP 1 Score: 61.2 bits (147), Expect = 8.860e-7
Identity = 51/173 (29.48%), Postives = 89/173 (51.45%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP 342
            C F+ KVL+AQ AGFS A+V++   + L  MG S+   A+  ++EIP V  ++++   L++ +      RG   YV     F   ++  L  F  V G ++ ++    +M+V   +Y +R        NR ++  ++ ++P  +  +G   E D C +CL+ Y  GDK+R  P
Sbjct:  101 CNFDIKVLHAQQAGFSAAIVHNMYSDTLLNMGYSNDTIAE--EIEIPSVFTSYSASQILRSYVIPE---RG--AYVILKPEFAFPLSYYLIPFTGVVGMIILVMVV--IMIVRCVQYRKRMRK-----NR-LTKEQLKKIPIHKFSKGD--EYDVCAICLDEYEEGDKLRVLP 256          
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Match: A0A250XAS1_9CHLO (RING-type domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAS1_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 9.140e-7
Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 0
Query:  157 ALISRSEKDDPSGCTFETKVLNAQAAGFSMAVVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTR 239
            ALISR +K   S CTF+ KV++AQ AG S A+VYD+  ENL  M    SK   H    IP + +   SGL L  L++  S  R
Sbjct:   79 ALISRQQKIPSSNCTFDIKVMHAQMAGASAAIVYDNVYENLIIM----SKPPGHAAPGIPAIFIDQPSGLLLTKLLQVESQLR 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12295.1922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L263_9PHAE8.150e-21993.31RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z7P9_9STRA4.590e-3945.73RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6P7Z5X0_9AMPH2.570e-728.74RING-type E3 ubiquitin transferase n=1 Tax=Microca... [more]
UPI00186458B02.770e-729.48E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Me... [more]
UPI00186426D74.690e-730.06E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Me... [more]
A0A8C9VSH5_SCLFO4.890e-730.64RING-type E3 ubiquitin transferase n=3 Tax=Sclerop... [more]
A0A8C9RVC1_SCLFO5.860e-730.64Profilin n=3 Tax=Scleropages formosus TaxID=113540... [more]
A0A150H1R6_GONPE8.830e-744.74RING-type domain-containing protein n=1 Tax=Gonium... [more]
UPI001F0755EE8.860e-729.48E3 ubiquitin-protein ligase RNF167 n=1 Tax=Hypomes... [more]
A0A250XAS1_9CHLO9.140e-744.58RING-type domain-containing protein n=1 Tax=Chlamy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003137PA domainPFAMPF02225PAcoord: 155..228
e-value: 7.8E-7
score: 29.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..342
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..258
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12295contigEcto-sp13_S_contig12295:30..4769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12295.1922.1mRNA_Ecto-sp13_S_contig12295.1922.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12295 30..4769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12295.1922.1 ID=prot_Ecto-sp13_S_contig12295.1922.1|Name=mRNA_Ecto-sp13_S_contig12295.1922.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=342bp
MTSYGKQRYWGLLRFILATAVGSIDLGAAVILVYNEGTTRFDDVPSMDNF
GPRIPEEGFAGRLQLAQPNVYACSAISGPTSTTAVASATAVKQAAGELDF
GGAAPPSRTRAHSGVSRGMPLAVSRQPPRGEILEAVTTTAPATATAAAGE
EDLPSAALISRSEKDDPSGCTFETKVLNAQAAGFSMAVVYDSREENLFKM
GRSSSKGAKHPKVEIPLVLVTHASGLALKALIETTSDTRGPEVYVDNTDP
FGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRP
MSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKVRFFP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003137PA_domain