prot_Ecto-sp13_S_contig7934.19224.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7934.19224.1
Unique Nameprot_Ecto-sp13_S_contig7934.19224.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length527
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7934.19224.1 vs. uniprot
Match: A0A6H5JJF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJF1_9PHAE)

HSP 1 Score: 543 bits (1398), Expect = 1.730e-181
Identity = 431/530 (81.32%), Postives = 439/530 (82.83%), Query Frame = 0 
Query:    3 RRRRRSRSISPGRSKRIKSRSRDRRGRDVAPPHGGGREAERFVDPAPARQRERGGRGSRDDGRRVTRSRERAMEGRHGGANTLVMSGXXXXXXXXXXXXXXREREVHIRDVHPMGNDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PDFRGEYQGGGGVSMNGHGRGGYPPAXXXXXXXXSGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ILNREREXXARMRELKAIEDRRASEAHALRRERLRQEEALKNARSRDGGXXXXXGVRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRANRGTYMTKQEVDALFLKVLKAMGEDNTRFPCMASLINDRMKSERDGYNVVNSEYGRFANVLARFEADKMVGTSKARESVQVNWTKFSAPGSGTGARRPESRRETEDTRVKIRTSYLGGPLVLHFCTAEDEGKMTTTTTMLPGEQATPAAGSGDXXXXXXXXXXXXXXXXXXXXXPAAATPYAEIASILQ 527
            RRRRRSRS+SPGRSKRIKSRSRDRRGRDVAPP+GGGREAERFVDPAPARQRERGGRGSRDDGRRVTRSRERAMEGRHGGANTLVMSG    XXXXXXXXX REREVHIRD+HP+GN+Y                           XXXXXXXXX         PDFRGEYQGGGGV +NGH        XXXXX   SGDR XXXX           XXXXXXXXXXXXXXXX   ILNRER XX  MRELKAIEDRRASEAHALRRERLRQEEALKNARSRDGG XXX GVRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          GRA RGTYMTKQEVDALFLKVLKAMGEDNTRFPCMASLINDRMKSERDGYNVVNSEYGRFANVLARFEADKMVGTSKARESVQVNWTKFSAPGSGTGARRPESRRETEDTR+KIRTSYLGGPLVLHFCTAEDE KMTTTT MLPGEQATPAAGSGD  XXXXXXXXXXXXXXXXXXX   ATPYAEIASIL+
Sbjct:    7 RRRRRSRSVSPGRSKRIKSRSRDRRGRDVAPPYGGGREAERFVDPAPARQRERGGRGSRDDGRRVTRSRERAMEGRHGGANTLVMSGGGIRXXXXXXXXX-REREVHIRDMHPVGNEYRGGGGMMPPGRGMPTNHHMPSPYPNEGXXXXXXXXXRMEMGREAPPDFRGEYQGGGGVPINGHXXXXXXXXXXXXXRGRSGDREXXXXRRVLEVQIAREXXXXXXXXXXXXXXXXXXXILNRERXXXXXMRELKAIEDRRASEAHALRRERLRQEEALKNARSRDGGGXXXSGVRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRGRDRAPAPGRATRGTYMTKQEVDALFLKVLKAMGEDNTRFPCMASLINDRMKSERDGYNVVNSEYGRFANVLARFEADKMVGTSKARESVQVNWTKFSAPGSGTGARRPESRRETEDTRLKIRTSYLGGPLVLHFCTAEDEVKMTTTT-MLPGEQATPAAGSGDADXXXXXXXXXXXXXXXXXXXXXXATPYAEIASILK 534
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7934.19224.1 vs. uniprot
Match: A0A835YJ15_9STRA (Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ15_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.680e-10
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:  336 GRANRGT--YMTKQEVDALFLKVLKAMGE---DNTRFPCMASLINDRMKSERDGYNVVNSEYGRFANVLARFEADKMVGTSKARESVQVNWTKF 424
            GR +RG   ++TK EVD LFL  LK + +   D  R P  AS+INDRM++    Y+  NS+Y RF+++L  FE  K++   K   +V + W K+
Sbjct:   88 GRGSRGAGYFLTKAEVDDLFLSALKEVFDKDRDRVRLPINASVINDRMRNINRNYHANNSDYARFSDILLTFENQKLIRCEKRGHTVLITWCKY 181
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7934.19224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJF1_9PHAE1.730e-18181.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJ15_9STRA2.680e-1040.43Putative 2'-deoxynucleoside 5'-phosphate N-hydrola... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..316
NoneNo IPR availableCOILSCoilCoilcoord: 259..279
NoneNo IPR availableCOILSCoilCoilcoord: 209..241
NoneNo IPR availablePANTHERPTHR13585FAMILY NOT NAMEDcoord: 6..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7934contigEcto-sp13_S_contig7934:1482..6304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7934.19224.1mRNA_Ecto-sp13_S_contig7934.19224.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7934 1482..6304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7934.19224.1 ID=prot_Ecto-sp13_S_contig7934.19224.1|Name=mRNA_Ecto-sp13_S_contig7934.19224.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=527bp
VARRRRRSRSISPGRSKRIKSRSRDRRGRDVAPPHGGGREAERFVDPAPA
RQRERGGRGSRDDGRRVTRSRERAMEGRHGGANTLVMSGGGMRGGGGGGG
GGGREREVHIRDVHPMGNDYRGGGAGMMPSGRGMPTNHHMPSPYPNEGGG
GGGGRMEMGRGAPPDFRGEYQGGGGVSMNGHGRGGYPPAPGGGHRGRSGD
RERDRERRVQIARERIRDREREREREREKERERILNREREERARMRELKA
IEDRRASEAHALRRERLRQEEALKNARSRDGGGGGASGVRGGDRDRERER
ERERERERERERERDRAAPRARVREGRGRDRAPAPGRANRGTYMTKQEVD
ALFLKVLKAMGEDNTRFPCMASLINDRMKSERDGYNVVNSEYGRFANVLA
RFEADKMVGTSKARESVQVNWTKFSAPGSGTGARRPESRRETEDTRVKIR
TSYLGGPLVLHFCTAEDEGKMTTTTTMLPGEQATPAAGSGDVDGGGGGSV
GHDDGLAAGGGAPAAATPYAEIASILQ
back to top