prot_Ecto-sp13_S_contig7923.19209.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: D7FI29_ECTSI (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI29_ECTSI) HSP 1 Score: 553 bits (1424), Expect = 8.110e-186 Identity = 382/393 (97.20%), Postives = 384/393 (97.71%), Query Frame = 0
Query: 6 QLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGRSNWDSSSPAPTADGSSSLYSPSSDGYG----RRGGYGGSRTP 394
+LQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISR+QVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXX GETPRGGGRSNWDSSSPAPTADG SSL SPSSDGYG RRGGYGGSRTP
Sbjct: 536 ELQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRSQVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXXXXGETPRGGGRSNWDSSSPAPTADGGSSLGSPSSDGYGYGYGRRGGYGGSRTP 928
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A6H5JFI1_9PHAE (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI1_9PHAE) HSP 1 Score: 498 bits (1281), Expect = 7.340e-167 Identity = 355/365 (97.26%), Postives = 356/365 (97.53%), Query Frame = 0
Query: 1 QVYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQV--KIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGR 356
+VYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQV KIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGR
Sbjct: 432 EVYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVEVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGR 796
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2VA26_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VA26_9STRA) HSP 1 Score: 207 bits (527), Expect = 4.160e-57 Identity = 119/264 (45.08%), Postives = 168/264 (63.64%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEIN---ASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE---VPGTPYTM--QTPMHG 253
V +SQL+E+ E +TG D LQGYELYDLV+L NEVGV+ RV RED V+NN G + RP+E+RGKRN+ S+RA +D Q NQL + V VVEG+H G T+K ++R+ LFLHS+T +++AG+F V++RS +LAG ++ + G G S + R R+D ++ KTV++ G KG +G V + T THV+VELH++LKKVT++ +V ++GD+ GA NQ P + P TP+ QTPMHG
Sbjct: 107 VRISQLRESAETTTGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIAREARPEELRGKRNAMSQRAVALDVQGNQLRSGDTVNVVEGRHKGKAATVKRMNRSQLFLHSQTRSEHAGVFVVKSRSCVLAGSRSQSRPGAGDGGATPWTPQSHQTGRPGAGRKRDDGLIGKTVRIQAGNWKGFIGTVSDTTGTHVEVELHARLKKVTVTHERVHVIGDKFGA-TENQTSNPAVNPQVMAPTTPFVAAGQTPMHG 369
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2V7W2_9STRA (Transcription elongation factor SPT5 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V7W2_9STRA) HSP 1 Score: 207 bits (527), Expect = 3.910e-55 Identity = 119/264 (45.08%), Postives = 168/264 (63.64%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEIN---ASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE---VPGTPYTM--QTPMHG 253
V +SQL+E+ E +TG D LQGYELYDLV+L NEVGV+ RV RED V+NN G + RP+E+RGKRN+ S+RA +D Q NQL + V VVEG+H G T+K ++R+ LFLHS+T +++AG+F V++RS +LAG ++ + G G S + R R+D ++ KTV++ G KG +G V + T THV+VELH++LKKVT++ +V ++GD+ GA NQ P + P TP+ QTPMHG
Sbjct: 562 VRISQLRESAETTTGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIAREARPEELRGKRNAMSQRAVALDVQGNQLRSGDTVNVVEGRHKGKAATVKRMNRSQLFLHSQTRSEHAGVFVVKSRSCVLAGSRSQSRPGAGDGGATPWTPQSHQTGRPGAGRKRDDGLIGKTVRIQAGNWKGFIGTVSDTTGTHVEVELHARLKKVTVTHERVHVIGDKFGA-TENQTSNPAVNPQVMAPTTPFVAAGQTPMHG 824
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: B7G376_PHATC (Transcription elongation factor SPT5 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G376_PHATC) HSP 1 Score: 205 bits (521), Expect = 2.550e-54 Identity = 124/268 (46.27%), Postives = 165/268 (61.57%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAA-----VGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE-----VPGTPYTM--QTPMHG 253
V SQL+E+ EV++G D LQGYELYDLV+L NEVGV+ RV RED V+NN G V+ +RP+E+RGKRNS S+RA +D Q NQ+ + V VVEG H G TIK + R LFLHS+T T +AGIF VR+RS +LAG + + A V + ++ R+D ++ KTV++ GQ KG +G V +AT THV+VELHS+LKKV + R +V + GD+ GA Q Q ++ P TP+ QTPMHG
Sbjct: 583 VRTSQLRESAEVASGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIVREIRPEELRGKRNSTSQRAVALDVQGNQIRASDSVNVVEGPHKGKTATIKRMSRAQLFLHSQTRTDHAGIFVVRSRSCVLAGTRTQARGATPDSGVSPFATPQSQSRGGPQPGRGKRDDGLIGKTVRIQAGQWKGYLGTVADATATHVQVELHSRLKKVMVVRERVAVAGDKFGA---TQEQNRMVDVNPNPIAPTTPFVAAGQTPMHG 847
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2GRM5_9STRA (50S ribosomal protein L24, chloroplastic (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRM5_9STRA) HSP 1 Score: 189 bits (481), Expect = 8.340e-53 Identity = 110/229 (48.03%), Postives = 148/229 (64.63%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGA 226
V SQLQE+ EV++G D L GYEL+DLV+L NEVGV+ RV RE+ V+NN G V+ VRP+E+RGKRNS S+RA +D Q NQ+ ++V + EG H G TIK + R LFL+S+T T++AGIF VR+RS +L+G R AA + R D ++ KTVKV G+ KG +G V +AT THV+VELHS++KKV + R +V +VGD+ GA
Sbjct: 51 VRTSQLQESAEVASGQDKLAGYELHDLVVLSGGGSANEVGVIVRVGREEFTVINNHGIVREVRPEELRGKRNSSSQRAVALDVQGNQIRCGDLVSIAEGPHKGKTATIKRMSRAQLFLYSQTRTEHAGIFVVRSRSCVLSGSRARPAAADTRQSQ----GGXXXXXXXRRGEDGLVGKTVKVQSGKWKGYLGCVSDATATHVQVELHSRMKKVMVVRERVVVVGDKFGA 275
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2LCY0_9STRA (Transcription elongation factor SPT5 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCY0_9STRA) HSP 1 Score: 201 bits (510), Expect = 9.350e-53 Identity = 124/265 (46.79%), Postives = 164/265 (61.89%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAV------GYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE--VPGTPYTM--QTPMH 252
V SQLQE+ E+++G D L GYEL+DLV+L NEVGV+ RV RE+ V+NN G V+ VRP+E+RGKRNS SRRA +D Q NQ+ V + V V EG H G TIK ++R LFL+S+T T++AGIF VR+RS +L+G NR G+ G A + +K R D ++ KTV+V GQ KG +G V +AT THV VELHS+LKKV + R +V +VGD+ G+ Q+ G P TP+ TPMH
Sbjct: 654 VRTSQLQESAEIASGQDKLAGYELHDLVVLSGGGSTNEVGVIVRVGREEFTVINNHGIVREVRPEELRGKRNSSSRRAVALDVQGNQIRVGDSVNVAEGPHKGKTATIKQMNRAQLFLYSQTRTEHAGIFVVRSRSCVLSGARNRSSMETANANGNGFKGGGGAGGRG--IK----REDGLIGKTVRVSSGQWKGYIGTVADATATHVSVELHSRLKKVMVLRERVAVVGDKYGSTDNPDRQQQYNGGGMAPTTPFLQGGATPMH 912
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S1GNB8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNB8_CYCTE) HSP 1 Score: 195 bits (496), Expect = 1.060e-52 Identity = 118/265 (44.53%), Postives = 160/265 (60.38%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNR-----GQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQK---PVIGEVPGTPYTM--QTPMH 252
V SQL+E+ E+++G D L GYELYDLV+L NEVGV+ RV RED VVNN G + VRP+E+RGK+N +S RA VD Q NQ+ V + V V EG H G TIK ++RT LFL+S+T T+NAGIF VR+RS +LAG ++ G V + + R+D ++ KTV++ GQ KG +G V +AT +HV+VELHS+LKKV ++R +V + GD+ G+ P P TP+ TPMH
Sbjct: 79 VRTSQLRESAEMASGQDKLAGYELYDLVVLSGGGSTNEVGVIVRVGREDFTVVNNHGISREVRPEELRGKQNQRSNRALAVDVQANQIRVGDQVTVTEGPHKGKTATIKRMNRTQLFLYSQTRTENAGIFVVRSRSVMLAGSRSQRSSGGGDGGVSPFSTPRSQSSGPPGGARGKRDDALIGKTVRIQSGQWKGYLGTVADATASHVQVELHSRLKKVMVTRERVVVAGDKFGSTENTSRDNNPVPTSMIAPTTPFVAGGATPMH 343
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A1Z5KC20_FISSO (Transcription elongation factor SPT5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC20_FISSO) HSP 1 Score: 193 bits (491), Expect = 2.680e-50 Identity = 118/260 (45.38%), Postives = 161/260 (61.92%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAG--RMNRGQAAVGYMGEI---NASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMH 252
V SQL+E+ E+++G D L GYELYDLV+L NEVGV+ RV RED V+NN G + VRP+E+RGKRNS S RA +D Q NQ+ ++V V EG H G TIK + R LFLHS+T +++AGIF VR+RS +L+G + +RG G + + + V N++D ++ KTV+V GQ KG +G V + T THV+VELHS+LKKV + R +V +VGD+ GA + + Q E M TPMH
Sbjct: 600 VRTSQLRESAEIASGQDRLSGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGLAREVRPEELRGKRNSTSVRAVALDVQGNQIRCGDIVNVAEGPHKGKAATIKRMSRAQLFLHSQTRSEHAGIFVVRSRSCVLSGSRQQSRGSGIDGGVSPFATPQSQSTRGPVGGRGNKDDGLIGKTVRVQAGQWKGYIGTVADTTATHVQVELHSRLKKVLVVREKVIVVGDKFGATSA-ESQAIDSMESNHISQAMATPMH 858
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A6S8Z740_9STRA (Transcription elongation factor SPT5 n=9 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8Z740_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.780e-50 Identity = 108/232 (46.55%), Postives = 152/232 (65.52%), Query Frame = 0
Query: 2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKN---DIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGA 226
V +SQLQE+ EV++G D L GYEL+DLV+L NEVG + RV RE+ V+NN G ++ VRP+E+RGKRNS S RA +D Q NQ+ V + V+V EG H G TIK + R LFL+S+T T+NAG+F VR+RS +L+G + + A G + N I ++D +++KTV++ G KG +G V +AT THV+VELHS+LKK+ + R +V +VGD+ GA
Sbjct: 570 VRISQLQESAEVASGQDKLAGYELHDLVVLSGGGSTNEVGCIVRVGREEFTVINNHGIIREVRPEELRGKRNSSSGRAVALDVQGNQIRVGDTVKVAEGPHKGKSATIKRMSRAQLFLYSQTLTKNAGVFVVRSRSCVLSGNRVQNREAPGGASPFSTPRSNGNQQIGARGGRKDDGLISKTVRIQAGNWKGYLGTVSDATPTHVQVELHSRLKKIMVLRERVAVVGDKFGA 801 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig7923.19209.1 ID=prot_Ecto-sp13_S_contig7923.19209.1|Name=mRNA_Ecto-sp13_S_contig7923.19209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=439bpback to top |