prot_Ecto-sp13_S_contig792.19199.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig792.19199.1
Unique Nameprot_Ecto-sp13_S_contig792.19199.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length557
Homology
BLAST of mRNA_Ecto-sp13_S_contig792.19199.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 602 bits (1551), Expect = 7.600e-190
Identity = 465/618 (75.24%), Postives = 471/618 (76.21%), Query Frame = 0
Query:    2 VGVRFVSEDVLNLNLTESLVENLAAIAHAQQRXXXXXXXXXXXXXXXXXXXXXXXXXXDNSFSLHWLRNETGLPVVCSAHYREPRGGGSXXXXXXXXXTDGEDDAEAAAAPV------------KVPVGQEAPVAASLGRPVRAVVLELEEXXXXXXXXXXXXATSWRSLRPIALDVAGGQRLATMVAAXXXXXXXXXXXXX---------TREGRHSSAGDASEMLRSSLSNDGTTTSWRSGSWTWAARALAAAPEDVAAAGRKGREAVKVVTEVESYRGFKMLRIRSLVEVANSMGGDVCLHVGLVGEEEAPGSSRRRRSRGAPRTGSRFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPGGHGERGAQAVSEAGVVTEEFQEALLVLPDREEWGLREDTTAERTASFHRTLEFAPAGPPQAGRTGPIFCGVSVARKAPAPKTGAGNGAGXXXXXXXXXXXXRAATAXXXXGG-------------------------------------GGAEEWAWSDKIERGDELSWLHCPPDEEAS-----LFLHG 556
            V VRFVSEDVLNLNLTESLVENLAAIAHAQQR  XXXXXXXXXXXXXXXXXXXX    DNSFSLHWLRNETGLPVVCSAHYREPRGG  XXXXXXXXX                          KVPVGQEAPVAASLGRPVRAVVLELEE            ATSWRSLRPIALDVAGGQRLA MVA    XXXXXXXXXX         TREGRHSSAGDASEMLRSSLSND TTTSWR GSWTWAA ALAAAPEDVAA GRKGREAV+VVTEVESYRGFKMLRIRSLVEVAN MGGDVCLHVGLVG+EEAPGSSR RRSRGAPR GSRFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPGGHGERGAQA SEAGVV EEFQEALLVLPDREEWGLREDTT ++TASFHRTLEFA AGPPQAG T PIFCGVSVARKAPAPKTGAGNGAG                      G                                          WAWSD IERGDELSWLHCPPDEEAS     ++L G
Sbjct: 2464 VDVRFVSEDVLNLNLTESLVENLAAIAHAQQRQGXXXXXXXXXXXXXXXXXXXX----DNSFSLHWLRNETGLPVVCSAHYREPRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPVGQEAPVAASLGRPVRAVVLELEEKDGEVEEEEEA-ATSWRSLRPIALDVAGGQRLAKMVAETAAXXXXXXXXXXXXXXXXSFSTREGRHSSAGDASEMLRSSLSNDRTTTSWRPGSWTWAALALAAAPEDVAA-GRKGREAVEVVTEVESYRGFKMLRIRSLVEVANGMGGDVCLHVGLVGQEEAPGSSRGRRSRGAPRAGSRFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPGGHGERGAQAASEAGVVAEEFQEALLVLPDREEWGLREDTTTDKTASFHRTLEFARAGPPQAGSTRPIFCGVSVARKAPAPKTGAGNGAGGKVTTVSFVPTMSLTNLLAAPAGVRLSCPSSSPSLTYLRARXXXXXXXXXXXXXXXXXXXXXXXXWAWSDTIERGDELSWLHCPPDEEASAVTAAVYLEG 3075          
BLAST of mRNA_Ecto-sp13_S_contig792.19199.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 542 bits (1397), Expect = 3.240e-169
Identity = 439/574 (76.48%), Postives = 447/574 (77.87%), Query Frame = 0
Query:    2 VGVRFVSEDVLNLNLTESLVENLAAIAHAQQRXXXXXXXXXXXXXXXXXXXXXXXXXX--DNSFSLHWLRNETGLPVVCSAHYREPRGGGSXXXXXXXXXTDGEDDAEAAAAPVKVPVGQEAPVAASLGRPVRAVVLELEEXXXXXXXXXXXXATSWRSLRPIALDVAGGQRLATMVAAXXXXXXXXXXXXXTREGRHSSAGDASEMLRSSLSNDGTTTSWRSGSWTWAARALAAAPEDVAAAGRKGR---EAVKVVTEVESYRGFKMLRIRSLVEVANSMGGDVCLHVGLVGEEEAPGSSRRRRSRGAPRTGSRFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL------PGGHGERGAQAVSEAGVVTEEFQEALLVLPDREEWGLREDTTAERTASFHRTLEFAPAGPPQAGRTGPIFCGVSVARKAPAPKTG------AGNGAGXXXXXXXXXXXXRAATAXXXXGGGGAEEWAWSDKIERGDELSWLHCPPDEE--ASLFLHG 556
            VGVRFVSEDVLNLNLTESLVENLAAIAHAQQRXXXXXXXXXXXXXXXXXXXXXXXXXX  DNSFSLHWLRNETGLPVVCSAHYRE RGG  XXXXX    TDGEDDAEA   PVKVPVGQEAPVAASLGRPVRAVVLELEE            ATSWRSLRPIALDVAGGQ                                                     SWTWAARALAAAPEDVAA GRK     EAVKVVTEVESYRG KMLRIRSLVEVAN MGGDVCLHVGLVGEEEAPGSSRRRRSRGAPR+GSRFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        PGGHGERGA+AVSEAGVV EEFQEALLVLPDREEWGLREDTTA+RTAS+HRTLEFAPAGPPQ GRTGP+FCGVSVARKA A                XXXXXXXXXXXX  A  XXXX      EWAWSD IERGDELSWLHCPPDEE  A+++L G
Sbjct: 3322 VGVRFVSEDVLNLNLTESLVENLAAIAHAQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSFSLHWLRNETGLPVVCSAHYREARGG-XXXXXXSLGLTDGEDDAEATTVPVKVPVGQEAPVAASLGRPVRAVVLELEEKGGEREEEEEG-ATSWRSLRPIALDVAGGQ-----------------------------------------------------SWTWAARALAAAPEDVAAVGRKXXXXXEAVKVVTEVESYRGVKMLRIRSLVEVANGMGGDVCLHVGLVGEEEAPGSSRRRRSRGAPRSGSRFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGHGERGAKAVSEAGVVAEEFQEALLVLPDREEWGLREDTTADRTASYHRTLEFAPAGPPQPGRTGPVFCGVSVARKASAAXXXXXXXXXGXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXEWAWSDTIERGDELSWLHCPPDEEVTAAVYLEG 3840          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig792.19199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKL9_9PHAE7.600e-19075.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP20_ECTSI3.240e-16976.48Vacuolar protein sorting-associated protein, putat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig792contigEcto-sp13_S_contig792:255..3475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig792.19199.1mRNA_Ecto-sp13_S_contig792.19199.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig792 255..3475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig792.19199.1 ID=prot_Ecto-sp13_S_contig792.19199.1|Name=mRNA_Ecto-sp13_S_contig792.19199.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=557bp
SVGVRFVSEDVLNLNLTESLVENLAAIAHAQQRQGESERQGRGWTGAAAA
AAGAGTGAGDNSFSLHWLRNETGLPVVCSAHYREPRGGGSGGGSGSLGLT
DGEDDAEAAAAPVKVPVGQEAPVAASLGRPVRAVVLELEEKDGEGEEEEE
EEATSWRSLRPIALDVAGGQRLATMVAATAAAAAAASSSSSTREGRHSSA
GDASEMLRSSLSNDGTTTSWRSGSWTWAARALAAAPEDVAAAGRKGREAV
KVVTEVESYRGFKMLRIRSLVEVANSMGGDVCLHVGLVGEEEAPGSSRRR
RSRGAPRTGSRFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVLHRR
RRGGSCHHGQRRPEGSSDATTGRLPDQSSSSSSLVGDDGFSAAAAAAAAA
AAAAASLPGGHGERGAQAVSEAGVVTEEFQEALLVLPDREEWGLREDTTA
ERTASFHRTLEFAPAGPPQAGRTGPIFCGVSVARKAPAPKTGAGNGAGGK
SAGGDGSGGDRAATAAAATGGGGAEEWAWSDKIERGDELSWLHCPPDEEA
SLFLHG*
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