mRNA_Ecto-sp13_S_contig7916.19197.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7916.19197.1
Unique NamemRNA_Ecto-sp13_S_contig7916.19197.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: D8LTD6_ECTSI (Protein kinase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD6_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.660e-114
Identity = 195/205 (95.12%), Postives = 195/205 (95.12%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDR 615
            PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIIND  D     XXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYG DNPVWKAVGPLLGWKQ RRGRGGRA AASATASKKFCRQLDRDR
Sbjct: 2083 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDGSD----XXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGTDNPVWKAVGPLLGWKQPRRGRGGRATAASATASKKFCRQLDRDR 2283          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A835ZET0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET0_9STRA)

HSP 1 Score: 181 bits (458), Expect = 6.490e-50
Identity = 113/275 (41.09%), Postives = 158/275 (57.45%), Query Frame = 1
Query:    7 DRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIII----------NDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADN----PVWKAVGPLLGWKQLR-RGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            + A L+KLADFGT+DV+  T   P+   HF+TLENT  E L  G++AVQGYA DTFA  LAA HLFTG+APYEE+M+EV+CP +L   L + W + PQ+    D+++          +D  DE+ED+               TL +T YRY VL GVP +  ++    A++     +W+A   +L    +R + R G+ AA  +        +   D+AKFS+  G    + RAR R+  +PGA+ELV+SM  FLP  RPTML +L S+VF   R
Sbjct:  245 NHAVLIKLADFGTSDVNSDTFNEPIGVDHFTTLENTAPELLLHGSQAVQGYALDTFAAGLAALHLFTGQAPYEELMDEVQCPAKLRVELRKAWSRAPQF----DVVVATNKRLMDSSSDESDEDEDN---------------TLYNTLYRYFVLLGVPGQSGVDSNSAAEHLQESSIWRAAVQVLVPSTVRGKTRKGQDAAVIS--------KFRTDQAKFSIATGTAPCMVRARGRMAAIPGALELVQSMLEFLPERRPTMLRLLKSEVFSGLR 492          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A5D6Y0B4_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 8.850e-48
Identity = 111/267 (41.57%), Postives = 147/267 (55.06%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLL-----GWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            P   AY +KLAD+GTA+ +  T+G+PV    F+TLENTPIE L  G+ A Q +A DTF+L L+  HLFTG APYEEI+E V CP +L  AL   W  NP+      ++     D+ E+                 L HT YRYLVLFG+P+        GA+  VW+A+   L        Q RR R   A+A +A ++     Q ++DRA+FSL  G    +QR RARL+  PG +EL+ S+  F P +RPTM  VL    F A R
Sbjct:  710 PPTFAYWIKLADYGTAESNAETLGSPVALDQFTTLENTPIEYLLEGDAAEQSFAGDTFSLGLSLLHLFTGSAPYEEILESVRCPRDLLQALKYIW-TNPRKTSGFAVLRRVIKDDSEN----------------ILYHTLYRYLVLFGLPEETPTR---GAEK-VWQAIRKYLYPQEAAMTQTRRSRSATASARAAKSASSAANQFEQDRARFSLASGTEATIQRGRARLEAAPGGLELLSSLVHFDPTKRPTMKSVLLHPFFAALR 955          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A4D9D2S7_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2S7_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.780e-46
Identity = 117/294 (39.80%), Postives = 151/294 (51.36%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGAD---NPVWKAVGPLLG------------------WKQLRRGRGGRA-----------AAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            P      VKLADFGTAD+ P T+G PV    F+TLENTP++ L  G+ A Q +A+D F+L LA +HLF G  PYEE+MEEV CP  L  AL + W +   Y  V   ++    DEEED             +D TL HTFYRYLVL G+P  +   E+ G     NPVWKAV   +G                  +    R R  RA           AA+  T  ++  RQ  +D A FSL  G +  V R R RL  +PGA  L++++  +LP  RP M E LTS++F   R
Sbjct: 1936 PPSLPLCVKLADFGTADLAPETLGEPVGLDQFTTLENTPVDFLVLGDGAKQDFAADAFSLGLAVWHLFAGRQPYEELMEEVRCPPPLRRALNKAW-RGKGYT-VLRKVLEAGEDEEEDE------------EDCTLHHTFYRYLVLLGLPSAEEQRESTGRTRGLNPVWKAVASCIGPYSAGQGQEDKGTAAPIAFTMSTRKRTTRACVAGTPLPPSLAASDVTTKERVTRQYWQDHASFSLRYGSHPSVLRGRERLAALPGAFSLLRALLDYLPQRRPGMYEALTSELFACLR 2215          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A3M6VC18_9STRA (Protein kinase domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VC18_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.850e-43
Identity = 108/271 (39.85%), Postives = 151/271 (55.72%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAV-------GPLLGWKQLR--RGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            P   +Y +KLADFG AD +  T+G+PV    F+TLEN+P+E L  G+ A Q YA+DTF L L   HLFTG APYEEI+E+V CP EL   L   W  +P+      +I + A  ++E+                TL HT YR++VLFG+P+R+  E        VW+ +        P L   Q R  R  G  +A   A ++K    Q D D++ +S+  G N  V+R R  LQ +PGAMEL+KS+  F PA+RPT+ +V+   +F +FR
Sbjct:  592 PASFSYWIKLADFGAADSNAETLGSPVTMDQFTTLENSPVEFLLEGDAAKQSYAADTFCLGLCVLHLFTGCAPYEEILEDVRCPIELLKDLKFIW-MSPRKNSGFSVIKSVARGDDEN----------------TLCHTLYRFIVLFGLPERNPSER--NEIEKVWQLLLKHLRPDDPALKHPQRRSRRTNGTSSAQLHALSTKS---QFDHDQSLYSITSGSNDVVRRCREGLQSIPGAMELLKSLVDFDPAKRPTLKQVMYHPIFSSFR 840          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A425C203_9STRA (Protein kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C203_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.110e-43
Identity = 106/273 (38.83%), Postives = 147/273 (53.85%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAV-------GPLLG---WKQLRR-GRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            P   +Y +KL D+GTAD +   +G+PV    F+TLEN+P+E L  G+ A Q YA+DTF L L   HLFTG APYEEI+E+V CP EL   L   W  +P+      +I +    ++                D TL HT YR++VLFG+P R+      G D  VW+ +        P L    W+  R  G+ G    AS+T S     Q D D++ +S+  G N  + R R  LQ +PGAMEL+ S+  F PA+RPT+ +V+   VF +FR
Sbjct:  121 PASFSYWIKLGDYGTADSNTENLGSPVTMDQFTTLENSPVEFLLEGDAAKQSYAADTFCLGLCVLHLFTGCAPYEEILEDVRCPVELLKDLKFVW-MSPRKNSTFSVIKSVVRSDD----------------DNTLCHTLYRFVVLFGLPGRN----PSGIDK-VWQLLLKHLRPDDPALKHFQWRSRRSTGKDGAQLHASSTKS-----QFDHDQSLYSIASGSNDIICRCREGLQSIPGAMELLNSLVDFDPAKRPTLKQVMYHPVFSSFR 366          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A8K1CDV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDV1_PYTOL)

HSP 1 Score: 160 bits (405), Expect = 4.330e-41
Identity = 101/262 (38.55%), Postives = 141/262 (53.82%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            P   +Y VKLAD+GTAD +   +G PV    F+TLENTPIE L  G+ A Q +A+DTF+L L   HLFTG APYEE++E V CP  L   L + W  N +      ++   A D+ +D                 L+HT YRYLV+ G+P  +  E  +   + +W  +   L  ++    R  R AA     + K   Q + DRAKFSL  G N  ++R R RL  +PGA  L++S+ +F PA+RPTM + L  + F + R
Sbjct:  642 PATFSYWVKLADYGTADSNVEHLGKPVTLDQFTTLENTPIEFLLEGDAAQQSFAADTFSLGLCLLHLFTGSAPYEEVLESVRCPPALLQDLKRVWMSNKKNSGFS-VLRQVANDDPDD----------------ILMHTIYRYLVMLGMPHTNPSE--HKQIDRIWSILVKHLRPEESPSSRPSRRAAKMPMKTAK--EQFEEDRAKFSLANGNNPTIKRGRDRLSRIPGAQALLQSLVAFNPADRPTMKQTLQHEFFWSLR 882          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A2D4CGF6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGF6_PYTIN)

HSP 1 Score: 160 bits (404), Expect = 7.050e-41
Identity = 104/268 (38.81%), Postives = 139/268 (51.87%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAV------GPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            P   +Y VKLAD+GTAD     +G PV    F+TLENTPIE L  G+ A Q +A+DTF+L L   HLFTG  PYEEI+E V CP  L   + + W  +P+      ++   A D+ +D                 L+HT YRYLVLFG+P  +   E+ G D+ VW  +       P       RR R G A     T   +F    + DRA F LD G N+ +  AR RL  +PGA +L+  + SF P +RPT+  VL  ++F   R
Sbjct: 1309 PATFSYWVKLADYGTADSTVANLGKPVTLDQFTTLENTPIEFLLEGDVATQSFAADTFSLGLCLLHLFTGRGPYEEIVEPVRCPPALLQDIKRLW-MSPKKNSGFSVLKRVARDDPDD----------------VLIHTLYRYLVLFGLPANNP-SESRGIDH-VWSVLTRHLRPSPNEMEGAARRSRRGAAKPQGPTPKAQF----EEDRAAFGLDIGSNEIIAHARERLTSIPGATDLLTRLVSFDPTQRPTLKSVLQHEIFDTLR 1553          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A7S2CK43_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CK43_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.380e-40
Identity = 108/279 (38.71%), Postives = 147/279 (52.69%), Query Frame = 1
Query:   22 VKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQN------------PQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPD---RDRLEE---------AYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            VKLADFGTADV+  ++G+ V   HF+TLEN+PIE L  G+ A Q Y++DT+ L L+  H+FTG  PYEE+MEEV CP  L   L++TW+               Q  +V   +++D     E+              DPTL  T YR+LVL GVP    RD   E         AY +++PVW+ V  +LG +Q R               K   R  D DR+++SLD G    ++ AR R+ ++ G + LVKSM  F    RPT+LEVL S  F + R
Sbjct:  237 VKLADFGTADVNADSLGSLVGLDHFTTLENSPIEYLFLGSGAQQDYSADTWQLGLSMLHMFTGHKPYEELMEEVVCPAALRRRLMKTWEAGYSRRKSVDSHIWRQRFEVIRDVMSDGDASREESEL-----------DPTLADTLYRFLVLLGVPSLKARDGDVEDGGSHPAPPAYVSESPVWETVTAVLGPRQRR----------FTHEEKDIQRTFDLDRSRWSLDHGDRPIMEGARLRMDKL-GGLSLVKSMLCFESDTRPTLLEVLGSSFFVSLR 493          
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A0W8CCA6_PHYNI (Protein kinase domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CCA6_PHYNI)

HSP 1 Score: 158 bits (400), Expect = 1.910e-40
Identity = 103/268 (38.43%), Postives = 141/268 (52.61%), Query Frame = 1
Query:    1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATA------SKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
            P   +Y VKLAD+G AD  P  +G PV   HF+TLEN PIE L  G+ A Q YA+DTF+L L   HLFTG APYEEI+E  +CP EL   L   W  NP+      +I   A  ++E+                TL H  YR++VLFG+P  +   E+ G D  VWK +   L  +     R  R    +A+A      SK    Q D D+A +S+  G +  + R R  L  +PGAM L+K +  F P++RPT+ +V+   +F + R
Sbjct:  588 PASFSYWVKLADYGAADSSPENLGKPVTIDHFATLENAPIEFLLEGDAAEQSYAADTFSLGLCLLHLFTGSAPYEEILEAAKCPAELLKDLKTLW-MNPRKNSKFSVIKKVAHGDDEN----------------TLYHALYRFIVLFGLP-AENPSESKGIDK-VWKLMIKHLRPEDSATKRPQRKCKLTASATKAQLHSKTAKEQFDHDQALYSIASGSDDIIYRCREGLMTIPGAMGLLKQLVDFNPSKRPTLKQVMYHPMFSSLR 836          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD6_ECTSI1.660e-11495.12Protein kinase domain-containing protein (Fragment... [more]
A0A835ZET0_9STRA6.490e-5041.09Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A5D6Y0B4_9STRA8.850e-4841.57Protein kinase domain-containing protein (Fragment... [more]
A0A4D9D2S7_9STRA1.780e-4639.80Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A3M6VC18_9STRA1.850e-4339.85Protein kinase domain-containing protein n=2 Tax=P... [more]
A0A425C203_9STRA4.110e-4338.83Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A8K1CDV1_PYTOL4.330e-4138.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CGF6_PYTIN7.050e-4138.81Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A7S2CK43_9STRA1.380e-4038.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0W8CCA6_PHYNI1.910e-4038.43Protein kinase domain-containing protein n=19 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7916contigEcto-sp13_S_contig7916:2759..6976 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score374.0
Seed ortholog evalue5.7e-101
Seed eggNOG ortholog2880.D8LTD6
Model size788
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs28UP7@1,2R1E5@2759
Cds size786
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7916.19197.1prot_Ecto-sp13_S_contig7916.19197.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7916 2759..6976 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464062.691203-CDS-Ecto-sp13_S_contig7916:2758..27791681464062.691203-CDS-Ecto-sp13_S_contig7916:2758..2779Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7916 2759..2779 +
1681464062.7055368-CDS-Ecto-sp13_S_contig7916:3479..36111681464062.7055368-CDS-Ecto-sp13_S_contig7916:3479..3611Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7916 3480..3611 +
1681464062.7181542-CDS-Ecto-sp13_S_contig7916:4199..42861681464062.7181542-CDS-Ecto-sp13_S_contig7916:4199..4286Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7916 4200..4286 +
1681464062.7280807-CDS-Ecto-sp13_S_contig7916:5284..54691681464062.7280807-CDS-Ecto-sp13_S_contig7916:5284..5469Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7916 5285..5469 +
1681464062.7415233-CDS-Ecto-sp13_S_contig7916:5886..59861681464062.7415233-CDS-Ecto-sp13_S_contig7916:5886..5986Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7916 5887..5986 +
1681464062.7510245-CDS-Ecto-sp13_S_contig7916:6715..69761681464062.7510245-CDS-Ecto-sp13_S_contig7916:6715..6976Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7916 6716..6976 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7916.19197.1

>prot_Ecto-sp13_S_contig7916.19197.1 ID=prot_Ecto-sp13_S_contig7916.19197.1|Name=mRNA_Ecto-sp13_S_contig7916.19197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp
PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAV
QGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQ
YVDVCDIIINDAGDEEEDHDVGDDDDDDDDTQDPTLLHTFYRYLVLFGVP
DRDRLEEAYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATASKKFCRQ
LDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTML
EVLTSDVFKAFR
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mRNA from alignment at Ecto-sp13_S_contig7916:2759..6976+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7916.19197.1 ID=mRNA_Ecto-sp13_S_contig7916.19197.1|Name=mRNA_Ecto-sp13_S_contig7916.19197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4218bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7916:2759..6976+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCTCAAGACCGGGCGTACCTGGTGAGTGGGGCTTGGGTGGGATAGAAGGC AAGGTTTGTGTGCTGTGGTTCCGTGCGTCCCGCTCTTTTTTGTACGCTAG GCCTTGCTTTTCAAGTCTTGTTTCCCTTGCAGCGTTTCAATTTGAAGCAG ATTTGGATTAGTGCCCAGTAGCACATAGGTAATGTGATCGATCGGACGTG CGCCAGAGCAAGAGAGAGAGGGAGAGGGAGAGAGATCGCGGAGACCGTGA AACGGGTTACCTGCAAGGGTGGGCGCGCGTTCGCGTGGATGGTTGTGCTC TCAAAACTGCTTGCATTTTGTCGAATTCCATCACGCAGCTTTTTTTGGGG CGTTGCGTGTTCTTCTTTTCTGCTGAGTTATGGCGTTTGGTCGTTCTTTT TCAATACTGTAGGGTCGAATTGTGGCGGTTTCGGAGATGGCGTTGGCGTT TCGGCGGAATCGGGCGAAGCGAAACAAGGGGTGAAGATGATGCGCGGCTT GCCGCACATGCCAATTCTTGTGCGCACGAGTGTGCGTGAAAAGACTCGGT AAATCAATCGCGGCCCCTCCGGCGGTACTTCCGTGGTAAGCACGTGTTCA AACACCTGTGCTTGTGCATCCTCCTGCTTGACGCAGGCTTTTGCAGCGCT TGACGTTTGCAACGATGTTCCCTCTCCCTTGTGTCTCATGAAATGTACGA CGCGACAACGTCGTAATGCAGGTAAAGCTTGCGGACTTCGGTACGGCGGA TGTGGACCCTCTGACGGTAGGAAACCCTGTGGAGGCGTGTCACTTCTCCA CACTAGAGAACACGCCCATCGAACAGCTGTGCTGCGGCAACAAGGCCGTG CAGGTGATGATGGGAACATGCGTAACGTTTTTGCGCTTGGACGTTGATCG CGTTTCGTGCAACACAACGTTCAACGTTTTCTGACCGCCCCGAAATAGGA TCAAGCACGTTTGGCATTTGGTTGCATGTGCTAGAGAATACATGGCAGGT GTTTTGCAAACACCGTAAGTTTGCACCCGCTTCATGCAGCAACACACCGA AGGCGATGCATTCTTGATTTGTTTTGTTGCTTGGAAAAGAAATGGAATGG TGTTCCCCCTACGTCCATCGGTGGAAAAATGCCGGCCATAGCGAGACATG GAAAAATAAGCGATTGGTTCAGTTGAAAGTGCAGCTCACCCACGAGCGTG TTTGCTATTCCTCGAGTCACACAGCAGTGACGGCTCCTTCGTAGGCAACA GGCTCAACTAGACAACTCGGGTTGTGTCCACAAAAGGCATGCCAACCTTT CTCTCTCTTTCGTTGACTTTTTCCCGACACAATGGACTTGTCGGCAACAT CAAGGATATTCTTGTGACGTCATTCTGCCTTCTCCCTGACCTTGATTGGT CTGTGCTCGGGACTGTCATGTTTTTCGTGCGGTCCATCCAGGGGTATGCT AGCGACACCTTCGCGTTGGCCCTGGCGGCGTTCCACCTCTTCACGGGAGA GGCGCCTTACGAAGAGATCATGGAAGAGGTGACCACAACCAAGATAGCGG GATTGCATAGACTGAATCGTCGAAAACCGGGAGGTAGTGTCTAAAATTTG CGGAAAATGCGTATCAAGGGTGTGGAGTAAGGAAATGCATCTGTTACTGT TACGGAAGATATCGTGGAAGGATGAAGTACGGCAGGTGCGCAAGGAAGTA CTTCCACTTGGTGGCAATACTGCAGTAGAGTTATCTGGACCAGTAGGTGT TGTGACTGCGGGTGCTGCTATTTTTGCTTTGCTTCATGAAGTGCTTCCTC AAAGTGGTGCGTAGTTGACTCTCGAGCGATCTCCGTCCATGCTCTATGGC GACCCCAGGGATGCTCTTAACGTAGCTTTGCTTTGCATCTCTTACAGTTT GGGGTCATGTCGTCAAGTCCCTTTGAAGCAACATATCAAAAGTTGCAATT ACATGCAAAATCAAAACTAGATATGTTCCGTGTGTTACTCGTGGATGACT TGAAGATATATTTATGGTTCGCCAGCGAGCGGCACGCTTAATAATGTTGG AGTCACATGCCTCCTAAACTGTACCACGCTCAACAATGTTTTCCTGATAT GAGTACAAGTGCTTTCGTGTAAGAAAGCGTACATGGCGTCATTTTGTGCC ACACACCAGCGTGGTGTAGTGCTGCAGTGTGTTTTCACTCACCCGTTGTT CGTTCATGGTTCATCAATCTTCAATCGTCTCGAAACCTTGGAACTGTAAC CTCTGTCACATGGTCATCACGTATTGTGTCTCTCTGGAGTTGGTACAGGG GACATTTTCATGTCTCGCGTGTTTTGTCTGATTCCCTCGAGTGTGTAAGT GCTTCAATCAACCCAATCCGTTACAGCCAATCGTTTGATATCTTCGAGTT CTAGAATGTATTATGTACGAGGTCTAGAATGCATTATCTACGAGGTCTAG AATGCATTGAACCTTGTTGAATCCATCGCTTCCTCTCCGTCTCCTTACTA TTATCTGCCTGTCCGTCTATCCGCAGGTGGAATGCCCCGATGAGCTCTAC GACGCCCTCGTGCAGACGTGGGATCAGAACCCGCAGTACGTGGATGTGTG TGACATCATCATCAACGATGCGGGCGACGAAGAGGAGGATCATGACGTCG GTGATGACGATGACGATGACGATGATACACAAGACCCAACCTTACTGCAC ACCTTCTACAGGTGGGTACTAAATAACAGTAGTGGTACACGGTAGGGCAT TACTGCGAGTTGCCCACATACGGCGATATCTTGCCAGGCTACAGGAATGC CCTTGCAATTCGTTAGTCCGCGCAAGATTTCAACCTCCCATGCAAAGCGT AGAATGCCCCCCGTCAACAGTAACAGGCGCGTGACGCAAAAAATGACAAC GACACGCAAGCCCGCGGAGGCAGCAGGTTGCTAGCGGTAGCGGCTGGGGC TTGTAGCAGACGTGTCTCCCCGCATGTGTTAAGATAGCTCCTCTCCTCCT ACAAGTATTTCCGTTTTTTTCCTCTCTTGTATCCTGTCTTTTTCGTACGT ACGCATCCAGAAGTGCTGTGTCGTGATCGATGTCTCCCTCTTATCGTCGA AGCGGTTTTCGTTGATTGATTGCTTCAGGTACTTGGTGCTGTTTGGTGTG CCGGATCGTGATCGCCTGGAGGAAGCGTACGGCGCGGACAACCCCGTCTG GAAGGCTGTCGGTCCTCTTCTCGGATGGGTGAGTTAGTTGCCTTCGTAGT TGATGTGTTGTGGTGGCGACTGCTGTTTGATGTAGTGGGCTTATACGTTT CTACTGTGGCTGCCGTTGCTGTCGCTGTCGGTGGTGCTGTTGTCGCTGCC TGTGGCAAGTTTACGTGCGAGCTGTAGTCGTTATTTTGACAGTAGCCCTC CGATACGACGATCGACGCCGGACTCGCTCGCTGTCCTGCTGCCTAAACAC GGGGGGCTGTTGCTGCTCGCCACTACTTTTGGAGGGAGTTGCGAGAAAAA GAGTACGGCACCTGGTACCATTTGTTCGTGCAAAGGAAATATCGCAGTGC CATGCGTTCCGGAAGCAAGGGGTTTTTGCATCGACGTATGCCTACGCATG TGATACATACGGCACGTTCAAAGCAAAAACTGCATTCGTATCTACCCAAG TGGAGATTGGCTGCTCCCTTAGAAGTTACAAGTAGGCCAACGGTTGCGGG CGCTCATAGGCCGTCAGCGGTACGGTAGTGGTGGCGCGGGGGGGGGGGGC ATATATACAACAGGCGATTATTTTTGGGTCGTCCGGCGTACGTTTAATGA ACAGTTAGTAAGCAAATTTTCATGACCTGTATCGAGTGTCCTTTGTCTTG ATAGTAAACATTCCTGCCGTGCTTCCGTCGTCTCTCCCTCTCTCCCTCTC TCTGTGTGGAAACTATCACCGAACGCAACACACGATCAACACATTGTGTC CGTGCAGAAGCAGTTGAGAAGGGGGCGCGGTGGGAGAGCGGCGGCGGCCT CCGCAACAGCGTCCAAGAAGTTCTGCCGGCAGCTGGACCGCGACCGAGCC AAATTCTCCCTAGACCGGGGAAAGAACAAGTTCGTACAGAGGGCGAGGGC AAGGCTGCAGGAAGTGCCCGGCGCCATGGAACTAGTCAAGTCGATGGCCA GCTTCCTGCCCGCCGAGAGACCGACCATGCTGGAGGTATTGACGAGCGAC GTCTTCAAAGCCTTCAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7916:2759..6976+

>mRNA_Ecto-sp13_S_contig7916.19197.1 ID=mRNA_Ecto-sp13_S_contig7916.19197.1|Name=mRNA_Ecto-sp13_S_contig7916.19197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=786bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7916:2759..6976+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCTCAAGACCGGGCGTACCTGGTAAAGCTTGCGGACTTCGGTACGGCGGA
TGTGGACCCTCTGACGGTAGGAAACCCTGTGGAGGCGTGTCACTTCTCCA
CACTAGAGAACACGCCCATCGAACAGCTGTGCTGCGGCAACAAGGCCGTG
CAGGGGTATGCTAGCGACACCTTCGCGTTGGCCCTGGCGGCGTTCCACCT
CTTCACGGGAGAGGCGCCTTACGAAGAGATCATGGAAGAGGTGGAATGCC
CCGATGAGCTCTACGACGCCCTCGTGCAGACGTGGGATCAGAACCCGCAG
TACGTGGATGTGTGTGACATCATCATCAACGATGCGGGCGACGAAGAGGA
GGATCATGACGTCGGTGATGACGATGACGATGACGATGATACACAAGACC
CAACCTTACTGCACACCTTCTACAGGTACTTGGTGCTGTTTGGTGTGCCG
GATCGTGATCGCCTGGAGGAAGCGTACGGCGCGGACAACCCCGTCTGGAA
GGCTGTCGGTCCTCTTCTCGGATGGAAGCAGTTGAGAAGGGGGCGCGGTG
GGAGAGCGGCGGCGGCCTCCGCAACAGCGTCCAAGAAGTTCTGCCGGCAG
CTGGACCGCGACCGAGCCAAATTCTCCCTAGACCGGGGAAAGAACAAGTT
CGTACAGAGGGCGAGGGCAAGGCTGCAGGAAGTGCCCGGCGCCATGGAAC
TAGTCAAGTCGATGGCCAGCTTCCTGCCCGCCGAGAGACCGACCATGCTG
GAGGTATTGACGAGCGACGTCTTCAAAGCCTTCAGG
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