prot_Ecto-sp13_S_contig79116.19193.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig79116.19193.1
Unique Nameprot_Ecto-sp13_S_contig79116.19193.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp13_S_contig79116.19193.1 vs. uniprot
Match: D7FUG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUG7_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.730e-34
Identity = 69/113 (61.06%), Postives = 72/113 (63.72%), Query Frame = 0 
Query:    1 MASLRAAGVPNHRSSTDXXXXXXXXXXXXXXXXXXXXXXXLNKRSFGKRKRRQQERPVCTWPKCNKPVGHLTGGCYRRIKSQRKAQKXXXXXXXXXXXXTSRTTARRPAAPDG 113
            MAS RAA VPNHRSS D                        N+R FGKRKRRQ+ERPVCTWPKC+KPVGHL G CYRRIKSQRKAQK     XX     TSRTTA RPAAPDG
Sbjct:   43 MASRRAADVPNHRSSNDDDAAVTRGTPSSFSNEESFSSSASNERGFGKRKRRQRERPVCTWPKCSKPVGHLIGRCYRRIKSQRKAQKERRAHXXKKRAKTSRTTACRPAAPDG 155
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79116.19193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUG7_ECTSI1.730e-3461.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig79116contigEcto-sp13_S_contig79116:253..591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig79116.19193.1mRNA_Ecto-sp13_S_contig79116.19193.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig79116 253..621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig79116.19193.1 ID=prot_Ecto-sp13_S_contig79116.19193.1|Name=mRNA_Ecto-sp13_S_contig79116.19193.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
MASLRAAGVPNHRSSTDDEAAATCGTPSSSSNEESFSSSTLNKRSFGKRK
RRQQERPVCTWPKCNKPVGHLTGGCYRRIKSQRKAQKERRAQRKKKRAKT
SRTTARRPAAPDG
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