prot_Ecto-sp13_S_contig79113.19192.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig79113.19192.1
Unique Name	prot_Ecto-sp13_S_contig79113.19192.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	80

Homology

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: D7FSY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSY8_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 4.220e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query:    1 MLLSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFP 73
            MLLSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFP
Sbjct:  412 MLLSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFP 484

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: D7G1R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R0_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 8.610e-40
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0

Query:    1 MLLSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFP 73
            MLLSRALHPIYFLFIAPPSAAAIAWTRI GEFD LSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFP
Sbjct:  361 MLLSRALHPIYFLFIAPPSAAAIAWTRITGEFDDLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFP 433

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: A0A811RU38_9POAL (Hypothetical protein n=3 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811RU38_9POAL)

HSP 1 Score: 87.4 bits (215), Expect = 2.450e-18
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0

Query:    3 LSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            L R LHP++FLF+A PS A++AW RI+GEF + +R  Y++A FLY   V   S F R  SFS+AWWAY+FP   A
Sbjct:  363 LPRDLHPVFFLFVATPSVASVAWARISGEFGLGARVAYYVALFLYASLVARVSFFFRGVSFSLAWWAYTFPVTSA 437

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: A0A0D9WKB1_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WKB1_9ORYZ)

HSP 1 Score: 87.4 bits (215), Expect = 2.450e-18
Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 0

Query:    3 LSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            L R LHP++FLF+A PS AA+AW R+ GEFD  +R  YF+A FLY+        F R   FS+AWWAY+FP   A
Sbjct:  374 LPRELHPVFFLFVAAPSVAAMAWARLAGEFDAAARMAYFVAIFLYVSLAARVDMFFRGVRFSLAWWAYTFPVTSA 448

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: A0A0A9HG11_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9HG11_ARUDO)

HSP 1 Score: 82.4 bits (202), Expect = 9.660e-18
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 0

Query:    3 LSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            L + LHP++FLF+A PS A++AW +ING FD  +R  YFIA FLYM   +   +F R   FS+AWWAY+FP   A
Sbjct:   17 LPKELHPVFFLFVAAPSVASMAWAKINGHFDSGARIAYFIALFLYMSLAV-RINFFRGFRFSLAWWAYTFPMTGA 90

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: UPI001CC6B173 (S-type anion channel SLAH3-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC6B173)

HSP 1 Score: 85.1 bits (209), Expect = 1.100e-17
Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 0

Query:    3 LSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            L + LHP++FLF+APPS A++AW +I GEFD  SR  YFIA FLY F +    +F R   FS+AWWAY+FP   A
Sbjct:  229 LPKELHPVFFLFVAPPSVASMAWAQIQGEFDYGSRIAYFIALFLY-FSLAVRINFFRGFRFSLAWWAYTFPMTGA 302

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: A0A443PR18_9MAGN (S-type anion channel SLAH2-like protein isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PR18_9MAGN)

HSP 1 Score: 85.5 bits (210), Expect = 1.190e-17
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 0

Query:    3 LSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            L + LHP++FLF+A PSAA++AW RI G+FD  SR +YFIA FLY F +    +F R   FS+AWWAY+FP   A
Sbjct:  448 LPKELHPVFFLFVAAPSAASMAWARIQGDFDYSSRIVYFIALFLY-FSLAVRVNFFRGFRFSLAWWAYTFPMTGA 521

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: A0A2K1LAU2_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LAU2_PHYPA)

HSP 1 Score: 85.5 bits (210), Expect = 1.190e-17
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 0

Query:    7 LHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            LHP++FLF+A PSA+++AW RI+GEFD +SR ++FIA FLY   ++   +F R   FS+AWWAY+FP   A
Sbjct:  446 LHPVFFLFVAAPSASSLAWMRISGEFDYVSRIVFFIALFLYTSLIV-RINFFRGFKFSIAWWAYTFPMTAA 515

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: A0A1D6NIB8_MAIZE (S-type anion channel SLAH3 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6NIB8_MAIZE)

HSP 1 Score: 85.1 bits (209), Expect = 1.620e-17
Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 0

Query:    1 MLLSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            M L + LHP++FLF+A PS A++AW +ING+FD  +R  YFIA FLYM   +   +F R   FS+AWWAY+FP   A
Sbjct:  445 MTLPKELHPVFFLFVAAPSVASMAWAKINGQFDAGARIAYFIALFLYMSLAV-RINFFRGFRFSLAWWAYTFPMTGA 520

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BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Match: A0A2T7DJI6_9POAL (Uncharacterized protein n=7 Tax=Paniceae TaxID=147428 RepID=A0A2T7DJI6_9POAL)

HSP 1 Score: 85.1 bits (209), Expect = 1.630e-17
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0

Query:    3 LSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFFVLGNSSFLRTASFSVAWWAYSFPCERA 77
            L + LHP++FLF+A PS A++AW RING+FD  +R  YFIA FLYM   +   +F R   FS+AWWAY+FP   A
Sbjct:  451 LPKELHPVFFLFVAAPSVASMAWARINGQFDAGARIAYFIALFLYMSLAV-RINFFRGFRFSLAWWAYTFPMTGA 524

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig79113.19192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSY8_ECTSI	4.220e-41	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7G1R0_ECTSI	8.610e-40	97.26	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A811RU38_9POAL	2.450e-18	53.33	Hypothetical protein n=3 Tax=Miscanthus lutariorip...	[more]
A0A0D9WKB1_9ORYZ	2.450e-18	52.00	Uncharacterized protein n=1 Tax=Leersia perrieri T...	[more]
A0A0A9HG11_ARUDO	9.660e-18	52.00	Uncharacterized protein n=1 Tax=Arundo donax TaxID...	[more]
UPI001CC6B173	1.100e-17	54.67	S-type anion channel SLAH3-like n=1 Tax=Telopea sp...	[more]
A0A443PR18_9MAGN	1.190e-17	54.67	S-type anion channel SLAH2-like protein isoform X2...	[more]
A0A2K1LAU2_PHYPA	1.190e-17	53.52	Uncharacterized protein n=2 Tax=Physcomitrium pate...	[more]
A0A1D6NIB8_MAIZE	1.620e-17	51.95	S-type anion channel SLAH3 n=2 Tax=Zea mays TaxID=...	[more]
A0A2T7DJI6_9POAL	1.630e-17	53.33	Uncharacterized protein n=7 Tax=Paniceae TaxID=147...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004695	Voltage-dependent anion channel	PFAM	PF03595	SLAC1	coord: 3..74 e-value: 1.1E-8 score: 34.8
IPR038665	Voltage-dependent anion channel superfamily	GENE3D	1.50.10.150		coord: 1..79 e-value: 1.3E-19 score: 72.5
IPR030183	S-type anion channel	PANTHER	PTHR31269:SF11	GUARD CELL S-TYPE ANION CHANNEL SLAC1	coord: 3..74
None	No IPR available	PANTHER	PTHR31269	FAMILY NOT NAMED	coord: 3..74
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 27..37
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 59..79
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 38..58
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..26
None	No IPR available	TMHMM	TMhelix		coord: 39..58
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig79113	contig	Ecto-sp13_S_contig79113:337..576 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig79113.19192.1	mRNA_Ecto-sp13_S_contig79113.19192.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig79113 337..585 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig79113.19192.1 ID=prot_Ecto-sp13_S_contig79113.19192.1|Name=mRNA_Ecto-sp13_S_contig79113.19192.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
MLLSRALHPIYFLFIAPPSAAAIAWTRINGEFDVLSRSLYFIAGFLYMFF
VLGNSSFLRTASFSVAWWAYSFPCERAPT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004695	Voltage-dep_anion_channel
IPR038665	Voltage-dep_anion_channel_sf
IPR030183	SLAC/SLAH