prot_Ecto-sp13_S_contig791.19188.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig791.19188.1
Unique Nameprot_Ecto-sp13_S_contig791.19188.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
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BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: D7FZ18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ18_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 3.470e-118
Identity = 214/251 (85.26%), Postives = 216/251 (86.06%), Query Frame = 0 
Query:    1 MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEGWAERLVAAIRSEAPADGVGGGDGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPSGEKQVGAEHERAPQRGAVGHQEGRGRGGVVLEGDLWPSTRRRQGGFQALRTLSHHCLLFERLPGGALERKTQDGVQEEMTSASALSHSQFSRLHTRRYRPSRLINLR 251
            MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEGWA RLVAAIRSEAPADG GG   V  XXXXXXXXXXXXXXXX        XXXXX       VRPSG KQV     RAPQR AVGHQEGRGRGGVVLEGDLWPSTRRR+GG QALRTLSHH LLFERLPG ALERKTQDGVQE+MTSASALSH Q SRLHTRRYR SRLINLR
Sbjct:    1 MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEGWAVRLVAAIRSEAPADGGGGXXXVXXXXXXXXXXXXXXXXXXTDSASATAXXXXXTSGVSGPVRPSGGKQV-PNTRRAPQRRAVGHQEGRGRGGVVLEGDLWPSTRRRKGGLQALRTLSHHRLLFERLPGSALERKTQDGVQEKMTSASALSHRQSSRLHTRRYRLSRLINLR 250
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BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 7.020e-53
Identity = 122/159 (76.73%), Postives = 123/159 (77.36%), Query Frame = 0 
Query:    1 MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAE----------GWAERLVAAIRSEAPADGVGGGDGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPSGEKQV 149
            MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAE          GWA RLVAAI SE+PADG GGGDGVAG XXXXXXXXXXXXXX                     VRPSG KQV
Sbjct:  206 MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEDFIAEGFSLGGWAVRLVAAILSESPADGGGGGDGVAGNXXXXXXXXXXXXXXVTDSASATAGGVGPTSGVSGPVRPSGGKQV 364
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ18_ECTSI3.470e-11885.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPW0_9PHAE7.020e-5376.73MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..253
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.519

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig791contigEcto-sp13_S_contig791:1622..6366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig791.19188.1mRNA_Ecto-sp13_S_contig791.19188.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig791 519..7303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig791.19188.1 ID=prot_Ecto-sp13_S_contig791.19188.1|Name=mRNA_Ecto-sp13_S_contig791.19188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGS
LFEGPLRGEALMRAPLELRNQAVKQAEGWAERLVAAIRSEAPADGVGGGD
GVAGNGDGDHGGAGGTVGAVTDSASATAGGVGPTSGVCGPVRPSGEKQVG
AEHERAPQRGAVGHQEGRGRGGVVLEGDLWPSTRRRQGGFQALRTLSHHC
LLFERLPGGALERKTQDGVQEEMTSASALSHSQFSRLHTRRYRPSRLINL
RPN*
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