mRNA_Ecto-sp13_S_contig791.19188.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: D7FZ18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ18_ECTSI) HSP 1 Score: 347 bits (890), Expect = 4.690e-113 Identity = 214/251 (85.26%), Postives = 216/251 (86.06%), Query Frame = 2
Query: 137 MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEGWAERLVAAIRSEAPADGVGGGDGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPSGEKQVGAEHERAPQRGAVGHQEGRGRGGVVLEGDLWPSTRRRQGGFQALRTLSHHCLLFERLPGGALERKTQDGVQEEMTSASALSHSQFSRLHTRRYRPSRLINLR 889
MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEGWA RLVAAIRSEAPADG GG V XXXXXXXXXXXXXXXX XXXXX VRPSG KQV RAPQR AVGHQEGRGRGGVVLEGDLWPSTRRR+GG QALRTLSHH LLFERLPG ALERKTQDGVQE+MTSASALSH Q SRLHTRRYR SRLINLR
Sbjct: 1 MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEGWAVRLVAAIRSEAPADGGGGXXXVXXXXXXXXXXXXXXXXXXTDSASATAXXXXXTSGVSGPVRPSGGKQV-PNTRRAPQRRAVGHQEGRGRGGVVLEGDLWPSTRRRKGGLQALRTLSHHRLLFERLPGSALERKTQDGVQEKMTSASALSHRQSSRLHTRRYRLSRLINLR 250
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE) HSP 1 Score: 272 bits (695), Expect = 2.170e-81 Identity = 165/204 (80.88%), Postives = 166/204 (81.37%), Query Frame = 2
Query: 2 SVLCAAEGGLKGVHAEEWVSLGALGAISLALEFNAAIPDYFTDFPMVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAE----------GWAERLVAAIRSEAPADGVGGGDGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPSGEKQV 583
SVLCAAEGGLKG HAEEWVSLGALGAIS ALEFNAAIPDYFTDFPMVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAE GWA RLVAAI SE+PADG GGGDGVAG XXXXXXXXXXXXXX VRPSG KQV
Sbjct: 161 SVLCAAEGGLKGAHAEEWVSLGALGAISSALEFNAAIPDYFTDFPMVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEDFIAEGFSLGGWAVRLVAAILSESPADGGGGGDGVAGNXXXXXXXXXXXXXXVTDSASATAGGVGPTSGVSGPVRPSGGKQV 364
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A7M5XBH4_9CNID (MYND-type domain-containing protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XBH4_9CNID) HSP 1 Score: 65.1 bits (157), Expect = 1.010e-7 Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 3
Query: 651 VLCSRETCGRRQGDVKEG-FKRCGRCRTTVYCSKDCQVAHWKEKHKMEC 794
V+CS CG+RQ D +E FK+CGRCR +YCS++CQV HW+ H C
Sbjct: 266 VICSNPVCGKRQPDEREKKFKKCGRCRINLYCSRNCQVTHWRSGHSKIC 314
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A196SGB7_BLAHN (MYND-type zinc finger protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGB7_BLAHN) HSP 1 Score: 60.5 bits (145), Expect = 5.770e-7 Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 3
Query: 642 DAAVLCSRETCGRRQGDVKEGFKRCGRCRTTVYCSKDCQVAHWKEKHKMEC 794
+A CS CG + E FK+C RC+T YCSK+CQ+ HWK HK EC
Sbjct: 2 NAVRTCSNPNCGNTESKPGE-FKKCSRCKTACYCSKECQLEHWKNGHKKEC 51
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A8H6VQS6_9AGAR (MYND-type domain-containing protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6VQS6_9AGAR) HSP 1 Score: 63.2 bits (152), Expect = 1.090e-6 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 3
Query: 570 ERSRLVPSTRGHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEGFKRCGRCRTTVYCSKDCQVAHWKEKHKMECKK 800
ER+RL + + L+V D C+ TC +++G + KRC RC+T +YCSK+CQ A WK++HK+EC K
Sbjct: 415 ERTRLAEAFKATLDV---------DLLRACNNATC-KKKGQTGD-LKRCARCQTAIYCSKECQAADWKKRHKLECGK 480
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A7M5WW42_9CNID (MYND-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WW42_9CNID) HSP 1 Score: 61.6 bits (148), Expect = 1.140e-6 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 3
Query: 627 IKRGADAAVLCSRETCGRRQGDVKEGFKRCGRCRTTVYCSKDCQVAHWKEK-HKMECKK 800
+K V+CS C + Q DVK FK+C RC+ T+YCSK+CQV HWK+ H +C++
Sbjct: 234 LKSQVSDRVVCSNSKCLKPQSDVK--FKKCSRCKVTLYCSKECQVVHWKQGGHHKQCQQ 290
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A8H6U3T7_9AGAR (MYND-type domain-containing protein n=1 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6U3T7_9AGAR) HSP 1 Score: 62.8 bits (151), Expect = 1.470e-6 Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 3
Query: 636 GADAAVLCSRETCGRRQGDVK-EGFKRCGRCRTTVYCSKDCQVAHWKEKHKMECKK 800
GA+ CS ++C +G K E KRC RC T+ YCSK+CQ A WK++HK EC K
Sbjct: 439 GAEDLTACSNDSC---KGKCKPEDLKRCARCHTSAYCSKECQAADWKKRHKAECGK 491
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: D8LGK8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 3.400e-6 Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 3
Query: 549 VGPCGLQERSRLVPSTRGHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEG--FKRCGRCRTTVYCSKDCQVAHWKEKHKMECKK 800
+G G QE +R + GH + + + A + C+ CG+RQG+ G FK C RC+ +YCS +CQ AHWK HKMEC++
Sbjct: 395 LGLGGQQELNRRMA---GHTVQKIKNKEAARAANIKCAM--CGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKT-HKMECRR 474
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A1Y1HZ10_KLENI (MYND-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZ10_KLENI) HSP 1 Score: 61.2 bits (147), Expect = 4.930e-6 Identity = 42/139 (30.22%), Postives = 60/139 (43.17%), Query Frame = 3
Query: 486 LGL*LTPLRLPPAELGRRQGCVGPCGLQERSRLVPSTRGHLNVVLSDIKRGADAAVL--------------------------CSRETCGRRQGD-VKEGFKRCGRCRTTVYCSKDCQVAHWKEKHKMECKKK*RAQAP 821
LGL LT R P+E VG G E + + + + L+ R +A +L CS + C R + V++ FKRC C+ YCSKDCQ+ HWK HK +C+K ++ AP
Sbjct: 728 LGLLLTSHRAHPSERAPFLRKVGEAGGVELTAEILRKEPRVRLALATCHRDNNATLLKEWVPGMLELARDLWDELAAEFWFLECSNKKCERDMVETVRKTFKRCSGCQKAQYCSKDCQLRHWKHGHKADCRKVAQSAAP 866
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Match: A0A409YL39_9AGAR (MYND-type domain-containing protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409YL39_9AGAR) HSP 1 Score: 59.7 bits (143), Expect = 1.370e-5 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 3
Query: 612 VVLSDIKRGADAAVLCSRETCGRRQGDVKEGFKRCGRCRTTVYCSKDCQVAHWKEKHKMECKKK 803
+V ++K A +C+ C ++ DVK F++C C TT+YCSK+CQ WK HK+ CK K
Sbjct: 451 LVALELKEVKKNAAICNNVKC--QKVDVKNNFRKCSACSTTLYCSKECQTEDWKAGHKVVCKLK 512 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig791.19188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig791.19188.1 >prot_Ecto-sp13_S_contig791.19188.1 ID=prot_Ecto-sp13_S_contig791.19188.1|Name=mRNA_Ecto-sp13_S_contig791.19188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp MVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSback to top mRNA from alignment at Ecto-sp13_S_contig791:519..7303+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig791.19188.1 ID=mRNA_Ecto-sp13_S_contig791.19188.1|Name=mRNA_Ecto-sp13_S_contig791.19188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6785bp|location=Sequence derived from alignment at Ecto-sp13_S_contig791:519..7303+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig791:519..7303+ >mRNA_Ecto-sp13_S_contig791.19188.1 ID=mRNA_Ecto-sp13_S_contig791.19188.1|Name=mRNA_Ecto-sp13_S_contig791.19188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig791:519..7303+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |