prot_Ecto-sp13_S_contig7901.19180.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7901.19180.1
Unique Nameprot_Ecto-sp13_S_contig7901.19180.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length809
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: D8LSQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ5_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 1.280e-68
Identity = 174/202 (86.14%), Postives = 183/202 (90.59%), Query Frame = 0 
Query:    1 MVLTSSLKVMGMAGLLAAANLATPANAFDGRKGLRGYRNLQQTCSNNLDGIDGINENGAVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNNRELCSVANAAPCVIDSGDGVAAPTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPSAADGDREIEIXXXXXXXXXXXXXAGGDTXXXPAA 202
            MVLTSSLKVMGMAGLLAAANLATPANAFDGRKGLRG+R+LQQ CSN+++GI+GINENG VCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNN+ELCSVA AAPCVIDSGDGV  PTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXX       ATP+P+AADGDREIEI   XXXXXXXXX  GGDT X PAA
Sbjct:    1 MVLTSSLKVMGMAGLLAAANLATPANAFDGRKGLRGHRSLQQVCSNSMNGIEGINENGVVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNNQELCSVAGAAPCVIDSGDGVTGPTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXX-------ATPSPTAADGDREIEITPAXXXXXXXXXATGGDTTXAPAA 195
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BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: A0A6H5J9S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S1_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 3.930e-30
Identity = 92/131 (70.23%), Postives = 97/131 (74.05%), Query Frame = 0 
Query:   48 LDGIDGINENGAVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNNRELCSVANAAPCVIDSGDGVAAPTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPSAADGDREIEI 178
            +DGIDGIN+ GAVCCTAECGQCGGEGCGSVPGLDNTNCCINGVL+N+ELCSV  AAPCVIDSG+         A TP PV         XXXXXXXXXXXXXXX           ATPAPSAADGDREIEI
Sbjct:    1 MDGIDGINDRGAVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLDNQELCSVVGAAPCVIDSGN--------VAPTPEPV---------XXXXXXXXXXXXXXXAGGGGTVDVGGATPAPSAADGDREIEI 114
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BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: A0A6H5JZG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG5_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.810e-10
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:   42 QTCSNNLDGIDGINENGAVCCTAECGQCGGEGC---GSVPGLDNTNCCINGVLNNRELCSVANAAPCVIDSGDG 112
            +TCSN L+GIDG   +G VCC+ +CGQCGG+GC   GS  GL    CC  G+  + E C   N APC+I S  G
Sbjct:  239 ETCSNGLEGIDG---SGGVCCSLDCGQCGGKGCYTSGSANGLGGDFCCSGGIKASDEYCDETNEAPCIIGSRPG 309
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 2.570e-8
Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:   44 CSNNLDGIDGINENGAVCCTAECGQCGGEGCGSVPG-LDNTNCCINGVLNNRELCSVANAAPCVIDSG 110
            CSN   GI    ++G  CC AECG+CGG GCG   G L    CC + +    ELCS+A AAPC ID G
Sbjct:  119 CSNGFPGI----QSGVSCCLAECGECGGRGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYIDDG 182
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.430e-7
Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:   48 LDGIDGINENGAVCCTAECGQCGGEGC---GSVPGLDNTNCCINGVLNNRELCSVANAAPCVIDS 109
            +DG +GI+ NG VCC   CGQCGG+GC   GS  GL + +CC  GV +    C   N APC+I S
Sbjct:  574 IDGTEGIDGNGVVCCPIGCGQCGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTNEAPCIIGS 638
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.150e-6
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:   43 TCSNNLDGIDGINENGAVCCTAECGQCGGEGCGSVPGLDNTN-CCINGVLNNRELCSVANAAPCVIDS 109
            TCSN + G     ++G  CC A CGQCGG GCGSVPG    + CC + V     LCS    +PCVID+
Sbjct:  454 TCSNGILGY----QDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDN 517
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BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: A0A6H5K6S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S4_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.390e-6
Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 0 
Query:   44 CSNNLDGIDGINENGAVCCTAECGQCGGEGCGSVPG-LDNTNCCINGVLNNRELCSVANAAPCVID 108
            CSN   GI    ++G  CC AECG+CGG GCG   G L    CC + +    ELCS+A AAPC ID
Sbjct:  446 CSNGFSGI----QSGNACCLAECGECGGHGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYID 507
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.550e-5
Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 0 
Query:   44 CSNNLDGIDGINENGAVCCTAECGQ-CGGEGCGSVPGLDNTNCCINGVLNNRELCSVANAAPCVIDSGD 111
            C N   G+   + +  VCC   CG  CGGEGCGS+ G+D T CC N ++ +  +CS   +APCV+ + +
Sbjct:  104 CENGQTGVQDPDTD--VCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAAE 170
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.690e-5
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 0 
Query:   44 CSNNLDGIDGINENGAVCCTAECGQ-CGGEGCGSVPGLDNTNCCINGVLNNRELCSVANAAPCVIDSGD 111
            C N   G+   + +  VCC  ECG  CGGEGCGS+PG++ T CC + ++ +  +CS   +APCV+ + +
Sbjct:  104 CENGQTGVPDPDTD--VCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAAE 170
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Match: A0A6H5JII7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.860e-5
Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 0 
Query:   44 CSNNLDGIDGINENGAVCCTAECGQCGGEGCGSVPG-LDNTNCCINGVLNNRELCSVANAAPCVID 108
            CSN + G+    ++G  CC AECG CGG GC  + G L   NCC   +    ELCS+   APCVID
Sbjct:  465 CSNGIPGV----QSGVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIKLEAPCVID 526
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7901.19180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LSQ5_ECTSI1.280e-6886.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9S1_9PHAE3.930e-3070.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZG5_9PHAE4.810e-1050.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ69_ECTSI2.570e-850.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUS5_9PHAE3.430e-749.23MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FZM1_ECTSI1.150e-648.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6S4_9PHAE1.390e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LML5_ECTSI1.550e-540.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7R2_9PHAE1.690e-540.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JII7_9PHAE1.860e-546.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 467..479
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..809
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.642

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7901contigEcto-sp13_S_contig7901:1..6610 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7901.19180.1mRNA_Ecto-sp13_S_contig7901.19180.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7901 1..6692 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7901.19180.1 ID=prot_Ecto-sp13_S_contig7901.19180.1|Name=mRNA_Ecto-sp13_S_contig7901.19180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=809bp
MVLTSSLKVMGMAGLLAAANLATPANAFDGRKGLRGYRNLQQTCSNNLDG
IDGINENGAVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNNRELCSVA
NAAPCVIDSGDGVAAPTPVAATTPAPVGVAPTPEPVAATPEPVAETPEPT
AAGGGGTVDAGGATPAPSAADGDREIEITPTPSVAGGGGGAAGGDTTPAP
AAGGGGTTGGDTTPAPAAGGGGATGGDTTPAPAAGGGGTTGGNTTPAPAA
GGGGTTGGDTTPAPTVAGAGGGGATGGGTTPAPTEAGAGGGGATGGDTTP
APTEAGGTRDAGGDVTPAPTEAGAGGGGATGGDTTPAPTEAGAAGGDTTP
APTVAGSGAGTVDGGTTAPTVAGGADATLAPGDVNGDGLVNSADTGIEGD
TNGDGIVDDADTGLVGDTNGDGVVDSMDSIVGDMNGDGLVNSADTGIVGD
TNGDGVVDDQDTGIVGDTNGDGAVDDSDLEDVNGDGLINSADTGVVGDTN
GDGVVDDFDTGLAGDTNGDGVVDSLDEMVGDVNGDGLVNSADTNIVGDTN
GDGVVDDEDTGLVGDTNGDGVVDSLDEIVGDVNGDGLINSADTNIIGDTN
GDGVVDDQDTGLVGDTNGDGVVDDQDVEVGDVNGDGLINSADTNIIGDTN
GDGVVDDEDTGLVGDTNGDGVVDDQDVEVGDVNGDGFINSADTGIVGDTN
GDGVVDDEDTGLVGDTNGDGVVDSMDEVVGDMNGDGLVNSADTGIVGDTN
GDGVVDGEDTGLVGDTNGDGVVDSLDELVADTNGDGLVNSADTNIVGDTN
GDGVVDDAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS