prot_Ecto-sp13_S_contig7900.19179.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7900.19179.1
Unique Nameprot_Ecto-sp13_S_contig7900.19179.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length221
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7900.19179.1 vs. uniprot
Match: D7FJ99_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ99_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.520e-114
Identity = 192/212 (90.57%), Postives = 196/212 (92.45%), Query Frame = 0 
Query:   12 ATRRRRGKQMESTMKKKRSDASRQRYENIYNVSEGLKEVVAEGGGXXXXXS---ETAKEWHEWQDATTSDSDDGDKGWSSFGGGESKAGGDGDGEAALRGSRDLTRKTVDAVRVLAEMGRIGEGEKSLLLADVIRNAPSGVASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHQCKAIAGQLLEQSNSNRPGRWRFWAKPQWXXXXASKDSE 220
            A R+R  + MESTMKKKRSDASRQRYENIYNVSEGLKEVVAEGGGXXXXX    ETAKEWHEWQDA TSDS  GDKGWSSFGG E K GGDG+GEAALRGSRDLTRKTVDAVRVLAEMGRIGEGEKSLLLADVIRN PSG ASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAH+CKAIAGQLLEQSNSNRPGRWRFWAKPQWXXXXASKDSE
Sbjct:  265 AMRKRIEEAMESTMKKKRSDASRQRYENIYNVSEGLKEVVAEGGGXXXXXXXXXETAKEWHEWQDAATSDSXXGDKGWSSFGGDEGKTGGDGEGEAALRGSRDLTRKTVDAVRVLAEMGRIGEGEKSLLLADVIRNVPSGGASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHECKAIAGQLLEQSNSNRPGRWRFWAKPQWXXXXASKDSE 476
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BLAST of mRNA_Ecto-sp13_S_contig7900.19179.1 vs. uniprot
Match: A0A6H5KNS2_9PHAE (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS2_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 4.180e-113
Identity = 195/211 (92.42%), Postives = 198/211 (93.84%), Query Frame = 0 
Query:   12 ATRRRRGKQMESTMKKKRSDASRQRYENIYNVSEGLKEVVAEGGGXXXXX--SETAKEWHEWQDATTSDSDDGDKGWSSFGGGESKAGGDGDGEAALRGSRDLTRKTVDAVRVLAEMGRIGEGEKSLLLADVIRNAPSGVASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHQCKAIAGQLLEQSNSNRPGRWRFWAKPQWXXXXASKDSE 220
            A R+R  + MESTMKKKRSDASRQRYENIYNVSEGLKEVVAEGG XXXXX  SETAKEWHEWQDA TSDSDDG KGWSSFGGGE KAGGDGDGEAAL+GSRDLTRKTVDAVRVLAEMGRIGE EKSLLLADVIRNA S VASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHQCKAIAGQLLEQSNSNRPGRWRFWAKPQWXXXXASKDSE
Sbjct:  475 AMRKRIEEAMESTMKKKRSDASRQRYENIYNVSEGLKEVVAEGGXXXXXXXXSETAKEWHEWQDAATSDSDDGGKGWSSFGGGEGKAGGDGDGEAALKGSRDLTRKTVDAVRVLAEMGRIGEEEKSLLLADVIRNASSDVASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHQCKAIAGQLLEQSNSNRPGRWRFWAKPQWXXXXASKDSE 685
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BLAST of mRNA_Ecto-sp13_S_contig7900.19179.1 vs. uniprot
Match: A0A835YQ09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ09_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.340e-11
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 0 
Query:  110 RDLTRKTVDAVRVLAEMGRIGEGEKSLLLADVIRNAPSGVASKVEIAYSVLLD----GEVTPEGMEYTDKAEEFAHQCKAIAGQLL 191
            RDLTR+TV A+R +   GRI + EK +LL DVI++A     S +E+AY +LL     G    EG    +  EEFA QC+  A  ++
Sbjct:   19 RDLTRRTVAAIREMCTAGRISDKEKRVLLTDVIKHATGESPSMIEVAYELLLSQMDSGSGASEGFGDDEACEEFAEQCRIFAADII 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7900.19179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJ99_ECTSI2.520e-11490.57SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KNS2_9PHAE4.180e-11392.42SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A835YQ09_9STRA7.340e-1141.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7900contigEcto-sp13_S_contig7900:4166..6389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7900.19179.1mRNA_Ecto-sp13_S_contig7900.19179.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7900 3001..6598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7900.19179.1 ID=prot_Ecto-sp13_S_contig7900.19179.1|Name=mRNA_Ecto-sp13_S_contig7900.19179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
MTVCVRFFVWYATRRRRGKQMESTMKKKRSDASRQRYENIYNVSEGLKEV
VAEGGGGGGGGSETAKEWHEWQDATTSDSDDGDKGWSSFGGGESKAGGDG
DGEAALRGSRDLTRKTVDAVRVLAEMGRIGEGEKSLLLADVIRNAPSGVA
SKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHQCKAIAGQLLEQSNSNRPG
RWRFWAKPQWWKFWASKDSE*
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