prot_Ecto-sp13_S_contig78968.19173.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig78968.19173.1
Unique Name	prot_Ecto-sp13_S_contig78968.19173.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	96

Homology

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: D7G0G2_ECTSI (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G2_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.660e-53
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query:    3 MFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQ 96
            MFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQ
Sbjct:  365 MFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQ 458

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: A0A6H5JZZ2_9PHAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ2_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 2.210e-52
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query:    3 MFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQ 96
            MFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQ
Sbjct:  365 MFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQ 458

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: A0A836CI73_9STRA (Ribosomal RNA methyltransferase nop2like protein put n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI73_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.010e-47
Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            ++MFSPAE VEF+EASD+PRP+VIR NTLKTRRKDLAEALIKRGVSLEPVA WSKVGLK+TES +PIGATPEYLAGHYMLQSAASMCPVMAL PQ
Sbjct:  261 LRMFSPAEAVEFMEASDRPRPVVIRTNTLKTRRKDLAEALIKRGVSLEPVAAWSKVGLKVTESTVPIGATPEYLAGHYMLQSAASMCPVMALDPQ 355

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: A0A7S2KVL9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KVL9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.250e-44
Identity = 74/95 (77.89%), Postives = 89/95 (93.68%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            + MF+P EC+EFL+ASD PRPLVIR NTLK RRKDLA+AL+KRG++L+P+AKWSKVGLKI+ES +P+GATPEYLAG+YMLQSAASMCPVMAL+PQ
Sbjct:  209 LNMFNPTECLEFLDASDMPRPLVIRTNTLKVRRKDLAQALMKRGINLDPLAKWSKVGLKISESPVPVGATPEYLAGYYMLQSAASMCPVMALSPQ 303

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: K3WHE3_GLOUD (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHE3_GLOUD)

HSP 1 Score: 159 bits (401), Expect = 1.270e-44
Identity = 76/95 (80.00%), Postives = 91/95 (95.79%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            MKMFSPAEC+EF+EA+++PRPLVIR NTLKTRR+DLA+ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+S+C VMALAPQ
Sbjct:   80 MKMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQ 174

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: F0YHS7_AURAN (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHS7_AURAN)

HSP 1 Score: 155 bits (393), Expect = 2.670e-44
Identity = 73/95 (76.84%), Postives = 86/95 (90.53%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            + +FSP+ECVEF++A+DKPRP+VIR NTLKTRRKDLA+ LIKRGV LEP+A WSKV LKITES +P+GATPEYLAGHYMLQSAAS CPV+AL P+
Sbjct:   64 LTIFSPSECVEFMDANDKPRPVVIRTNTLKTRRKDLAQTLIKRGVHLEPMAAWSKVALKITESSVPVGATPEYLAGHYMLQSAASQCPVLALGPE 158

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: A0A662WYH6_9STRA (SAM_MT_RSMB_NOP domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYH6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.690e-44
Identity = 74/95 (77.89%), Postives = 89/95 (93.68%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            + MFSPAECVEF+EA+++PRPLVIR NTLK RR+DLA+ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+S+C VMALAPQ
Sbjct:  212 LTMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQ 306

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: A0A7S2YBT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBT5_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.650e-44
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            + M  P E +EF++ASDKPRPLVIR NTLK RRKDLA  LIKRGVSL+P+A WSKVGLKI ES +PIGATPEYL GHYMLQSAASMCPV+AL+P+
Sbjct:   61 VSMLGPTEALEFIDASDKPRPLVIRTNTLKVRRKDLAAGLIKRGVSLDPLANWSKVGLKIVESPVPIGATPEYLGGHYMLQSAASMCPVLALSPE 155

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: B8C1V6_THAPS (SAM_MT_RSMB_NOP domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V6_THAPS)

HSP 1 Score: 157 bits (398), Expect = 4.760e-44
Identity = 77/95 (81.05%), Postives = 84/95 (88.42%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            + MF P EC+EFLEASDKPRPLV+R NTLK RRKDLA AL+KRGV L+P+A WSKVGLKI ES +PIGATPEYLAGHYMLQSAASMCPVMAL PQ
Sbjct:  135 LSMFGPNECLEFLEASDKPRPLVVRVNTLKARRKDLAAALMKRGVRLDPLAPWSKVGLKIYESTVPIGATPEYLAGHYMLQSAASMCPVMALGPQ 229

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BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Match: G4YQA7_PHYSP (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YQA7_PHYSP)

HSP 1 Score: 157 bits (396), Expect = 7.570e-44
Identity = 75/95 (78.95%), Postives = 90/95 (94.74%), Query Frame = 0

Query:    1 MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQ 95
            +KMFSPAECVEF+EA+++PRPLVIR NTLK RR+DLA+ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+S+C VMALAPQ
Sbjct:   85 LKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQ 179

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig78968.19173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0G2_ECTSI	1.660e-53	100.00	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A6H5JZZ2_9PHAE	2.210e-52	100.00	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A836CI73_9STRA	5.010e-47	87.37	Ribosomal RNA methyltransferase nop2like protein p...	[more]
A0A7S2KVL9_9STRA	1.250e-44	77.89	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
K3WHE3_GLOUD	1.270e-44	80.00	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
F0YHS7_AURAN	2.670e-44	76.84	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A662WYH6_9STRA	2.690e-44	77.89	SAM_MT_RSMB_NOP domain-containing protein (Fragmen...	[more]
A0A7S2YBT5_9STRA	4.650e-44	75.79	Hypothetical protein (Fragment) n=1 Tax=Amphiprora...	[more]
B8C1V6_THAPS	4.760e-44	81.05	SAM_MT_RSMB_NOP domain-containing protein (Fragmen...	[more]
G4YQA7_PHYSP	7.570e-44	78.95	SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023273	RNA (C5-cytosine) methyltransferase, NOP2	PRINTS	PR02012	RCMTNOP2	coord: 8..20 score: 49.41 coord: 31..44 score: 67.53
None	No IPR available	GENE3D	3.30.70.3130		coord: 1..85 e-value: 8.7E-32 score: 111.2
None	No IPR available	PANTHER	PTHR22807:SF30	28S RRNA (CYTOSINE(4447)-C(5))-METHYLTRANSFERASE-RELATED	coord: 1..96
None	No IPR available	PANTHER	PTHR22807	NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING	coord: 1..96
IPR031341	Ribosomal RNA small subunit methyltransferase F, N-terminal	PFAM	PF17125	Methyltr_RsmF_N	coord: 2..86 e-value: 1.3E-11 score: 44.9
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PROSITE	PS51686	SAM_MT_RSMB_NOP	coord: 12..96 score: 15.517
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 7..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig78968	contig	Ecto-sp13_S_contig78968:7..602 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig78968.19173.1	mRNA_Ecto-sp13_S_contig78968.19173.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig78968 7..617 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig78968.19173.1 ID=prot_Ecto-sp13_S_contig78968.19173.1|Name=mRNA_Ecto-sp13_S_contig78968.19173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
MKMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPV
AKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023273	RCMT_NOP2
IPR031341	Methyltr_RsmF_N
IPR001678	MeTrfase_RsmB/NOP2
IPR029063	SAM-dependent_MTases