prot_Ecto-sp13_S_contig7896.19171.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7896.19171.1
Unique Nameprot_Ecto-sp13_S_contig7896.19171.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 6.280e-133
Identity = 194/205 (94.63%), Postives = 196/205 (95.61%), Query Frame = 0
Query:    1 VEEEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETVDEL 205
            VE+EDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDL GGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCF  RVGEHGERSAGNHVWKGGW CDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWD+AL VLEALEHGRDPVEVV RKSPEPDRGD TET GGKA VYQGITVEELGTKWQETVDEL
Sbjct:  504 VEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHVWKGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETET-GGKADVYQGITVEELGTKWQETVDEL 707          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 9.270e-115
Identity = 174/222 (78.38%), Postives = 179/222 (80.63%), Query Frame = 0
Query:    3 EEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRN-------------------GMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETVDEL 205
            E DCRKLEELRVCDWLRSISRR+PDNDVILVATKCDLAGGNA EIGSRME +CRTWLSGWVRN                   GMQPVRLEPHVCLTS    RV EHG+RSAGNH  KGGW CDWR+ EDDQP PSFLHRLVNKPDGRGLRG Q VLPRSWDIALTVLEALEHGRDPVE V  KSP+PD  D  ETAGGK  VYQGITVEELGTKWQETVDEL
Sbjct:  107 EGDCRKLEELRVCDWLRSISRRIPDNDVILVATKCDLAGGNAREIGSRMEKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQPVRLEPHVCLTSSLPVRVDEHGDRSAGNHGSKGGWACDWRDEEDDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDEL 328          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 3.990e-113
Identity = 164/202 (81.19%), Postives = 177/202 (87.62%), Query Frame = 0
Query:    4 EDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETVDEL 205
            EDCRKLEELRVCDWLRSISRRVP+NDVILVATKCDLAGGNAG+IG+RME++CR WLS WVRNG+QPVRLEP V LTSCF   VGEHGE S G+H  KGGW CDWR++ D  PSPS LHRLVNKPDGRGLRG QMVLPRSWDIALTVLEALEHGRDPVEVV RKSP+PDRGD TETA G+  +YQGITVE+L  KWQETVD L
Sbjct:  292 EDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGL 493          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 3.980e-102
Identity = 153/203 (75.37%), Postives = 166/203 (81.77%), Query Frame = 0
Query:    3 EEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETVDEL 205
            EEDCRKLEELRVCDWLRSISRRVP NDVILV TKCDLAGGNA EIG R+E++CRTWLS WVR+GMQPV+LEP V  TSCF A  G+HGE    NH  KG W CDW +++DD P PS LHRLVNKPDG GLRGAQMVLPRSWD  L VL++LE GRDPVEVV RKS  PDRGD TETAGG  VVYQGITVE+L  KWQ+ VDEL
Sbjct:  241 EEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDEL 443          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: A0A6H5KJL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL6_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 1.190e-97
Identity = 135/154 (87.66%), Postives = 140/154 (90.91%), Query Frame = 0
Query:    3 EEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHG 156
            EEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNA EIGSRME +CRTWLSGWVRNGMQPVRLEPHVCLTSCF  RV + G+R+AGNH  KGGW CDWR+ EDDQP P FLHRLVNKPDGRGLRG QMVLPRSWDIALT LEALEHG
Sbjct:  166 EEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAREIGSRMEKTCRTWLSGWVRNGMQPVRLEPHVCLTSCFPVRVDKQGDRNAGNHGSKGGWACDWRDEEDDQPPPGFLHRLVNKPDGRGLRGTQMVLPRSWDIALTFLEALEHG 319          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 4.030e-95
Identity = 149/203 (73.40%), Postives = 162/203 (79.80%), Query Frame = 0
Query:    3 EEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETVDEL 205
            EEDCRKL+ LRVCDWLRSISRRVP NDVILVATKCDL  GNA E G R+E++CR WLS WVRNGM PVRLEPHV LTSCF    GEHGE + G+   K GW CDWR+VE D+ SPS L+RLVNKPD  GLRG QMVLPRSWDIALTVLEALEHGRDPVE+V  KSP+ +R   TET  GK  VYQ I VEELGT W+ETVDEL
Sbjct:  222 EEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERRP-TETGVGKTNVYQAIKVEELGTNWRETVDEL 423          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 2.330e-94
Identity = 144/203 (70.94%), Postives = 156/203 (76.85%), Query Frame = 0
Query:    3 EEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETVDEL 205
            EEDCRKLE LRVCDWLRSIS RVP NDVILVATKCDL  GN  E G R+E++CRTWLS WVRNGM  VRLE HV LTSCF     EHGE   GNH  K GW CDWR+VE D  SPS L+RLVNKPD  GLRG QMVLPRSWD+ALT L++LE+GR PVE+V  KSP+ D G  TETAGG   VYQGITVEEL  +WQ TVDEL
Sbjct:  271 EEDCRKLEGLRVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETGQRIEHACRTWLSSWVRNGMDSVRLERHVSLTSCFPIGASEHGESRRGNHALKQGWACDWRDVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVMLKSPDSDSG-ATETAGGTTTVYQGITVEELSARWQGTVDEL 472          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 5.770e-93
Identity = 142/199 (71.36%), Postives = 157/199 (78.89%), Query Frame = 0
Query:    4 EDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETV 202
            EDCRKLEELRVCDWLRS+SRRVP+NDVILVATKCDL GGNA E G R+E + RTWL+ WV +GMQPVRLEP VCLTSC  + VGE+GE+S G++  + GW CDWR+  DD P P  +HRLVNKPDG GLRG QMVLPRSWDIALTVLEALE GRDPVEVV     EPDR D T TA  +  VYQGITVE L  KWQE V
Sbjct:  336 EDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAV 534          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 1.550e-92
Identity = 144/197 (73.10%), Postives = 156/197 (79.19%), Query Frame = 0
Query:    4 EDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQE 200
            EDCRKLEELRVCDWLRSISRRVPDNDVILVATKCD  GGNAGEIG R+E + R WL+ WVR+GMQPVRLEP VCLTSC    V E GERS  N   +GGW CDWR+ +DD PSPS LHRLVNKPDG GLRGAQMV+PRSWDIALTVLEALE GRDPVE+V     + D GD T TA  K  +Y GIT E+L TKWQE
Sbjct:  436 EDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQE 632          
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.170e-91
Identity = 144/202 (71.29%), Postives = 153/202 (75.74%), Query Frame = 0
Query:    4 EDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWKGGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVLEALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQETVDEL 205
            EDCRKLEELRVC+WLRSI+RRVPDND ILVATKCDL GGNA E+G RME +CR WL+ WVRNGMQPVRLE  V LTSC   R GEHGER   NH  +GGWVCDWR    D  +P  LHRLVNKPDG GLRG Q+VLPRSWDIALTVLEALE GRDPVEVV  K     RGD  E     A  YQGITVE+L  KW ETVDEL
Sbjct:  364 EDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTANHTVEGGWVCDWRGHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDEL 565          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7896.19171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF46_ECTSI6.280e-13394.63LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K1K4_9PHAE9.270e-11578.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ8_9PHAE3.990e-11381.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI3.980e-10275.37LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5KJL6_9PHAE1.190e-9787.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA1_ECTSI4.030e-9573.40LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5L650_9PHAE2.330e-9470.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC9_ECTSI5.770e-9371.36LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI1.550e-9273.10LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC3_ECTSI1.170e-9171.29LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7896contigEcto-sp13_S_contig7896:726..2439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7896.19171.1mRNA_Ecto-sp13_S_contig7896.19171.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7896 726..2441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7896.19171.1 ID=prot_Ecto-sp13_S_contig7896.19171.1|Name=mRNA_Ecto-sp13_S_contig7896.19171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
VEEEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAGEIGSR
MENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFRARVGEHGERSAGNHVWK
GGWVCDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDIALTVL
EALEHGRDPVEVVFRKSPEPDRGDVTETAGGKAVVYQGITVEELGTKWQE
TVDEL
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