mRNA_Ecto-sp13_S_contig12290.1917.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12290.1917.1
Unique NamemRNA_Ecto-sp13_S_contig12290.1917.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: D7G2L3_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L3_ECTSI)

HSP 1 Score: 554 bits (1427), Expect = 8.260e-193
Identity = 275/279 (98.57%), Postives = 278/279 (99.64%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEKGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAEQV 837
            LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGE+GRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDF+WRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYK AAEQ+
Sbjct:  290 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEQGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFAWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKTAAEQL 568          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: A0A836CJP1_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP1_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 1.400e-128
Identity = 189/280 (67.50%), Postives = 230/280 (82.14%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEKGR----QMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAA 828
            L+L   ++ ILDEADQMLDMGFKEEMEKVF  C  E +       Q LLFSATMP WV +V K+YMK DR++IDLV    VKAS+DV+H+ +PC W +R+STIND++SVY AGG+KRT+VFC+TK+ CNEL +D  ++++CQ LHGDITQANRESTL+GF+KGSFKVLVATDVAARGLDM VDLV+NAEPP+  SGRVDTE+YVHRSGRTGRAGRKG+CITLYTPR RG L EIERHI N F WRG+PQPDDI+ ASA AA++D+  +DD+V+  + +AA
Sbjct:  283 LKLDQTDYFILDEADQMLDMGFKEEMEKVFAQCRGEADGAERREVQTLLFSATMPEWVQRVAKDYMKADRMYIDLVGNSAVKASQDVQHVAVPCQWQTRASTINDLISVYAAGGSKRTLVFCSTKKQCNELIVDEGISFECQPLHGDITQANRESTLSGFRKGSFKVLVATDVAARGLDMTVDLVINAEPPSTASGRVDTEAYVHRSGRTGRAGRKGVCITLYTPRSRGALAEIERHIKNAFVWRGSPQPDDIIAASAEAAVEDMADIDDNVLPRFASAA 562          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: A0A7R9U1A7_9STRA (RNA helicase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1A7_9STRA)

HSP 1 Score: 335 bits (860), Expect = 8.020e-107
Identity = 171/283 (60.42%), Postives = 218/283 (77.03%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACG--EEGEKG---RQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAEQ 834
            L+L    F ILDEADQMLDMGFKEE+E++F A G  EEG+     RQ LLFSAT+P WV +V K++++ED + IDLV + T+KAS DV HI +PCHW +RS TI DI+S++ AG   RTIVFC  K+DCNEL MD  ++Y+CQALHGDI Q+ RE+TLAGF++G F+VLVATDVAARGLDM+VDLV+  EPP  +SG  D E+YVHRSGRTGRAGRKG+C+TLYTP+QR  L  IE+ IGN F W+GAPQP DI+ ++A   ++ + AVD++VI  +  AAE+
Sbjct:  299 LRLQHLRFAILDEADQMLDMGFKEELEQIFAAMGSAEEGDGRDWPRQTLLFSATLPAWVGEVKKQFLREDCLSIDLVGDSTIKASTDVSHIAVPCHWQTRSKTIGDIISLH-AGQKGRTIVFCERKKDCNELIMDEGISYECQALHGDIAQSQRETTLAGFREGRFRVLVATDVAARGLDMVVDLVIMIEPPIKKSGYPDVETYVHRSGRTGRAGRKGVCVTLYTPKQRQALQMIEKKIGNLFVWQGAPQPADILASAATQTLNSLSAVDEAVIPSFMKAAEE 580          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: K8YSG2_NANGC (RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSG2_NANGC)

HSP 1 Score: 330 bits (846), Expect = 7.840e-105
Identity = 162/280 (57.86%), Postives = 213/280 (76.07%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEKGRQMLLFSATMPPWVDKVVKEYMKEDR-VFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAEQV 837
            L+LS   F+ILDEAD MLDMGFK++++KV +A G++  + RQ+LLFSAT+PPWV KV ++YM++D+ V +DLV+    KAS DV H+ IPCHW+S  ST+ D ++VYG     RTIVFC TK++CNEL ++P +  +C ALHGDI QA RE+TL  F++G  +VLVATDVAARGLDM VDLV+  +PP   SGR D E+YVHRSGRTGRAGRKG+C+TL++P+ R  + EIE  +GN F W GAPQP DIV ASA AA++D+  VDD V  L++AAA ++
Sbjct:  283 LKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKL 562          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: A0A1W0A9D4_9STRA (RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9D4_9STRA)

HSP 1 Score: 305 bits (780), Expect = 5.570e-96
Identity = 148/279 (53.05%), Postives = 208/279 (74.55%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEKGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAEQV 837
            L+L+D +F+ILDEAD ML+MGF+E+++KVFEA  E  +   Q LLFSAT+P W+D+V K+YMK DR F+++V +   +ASKDV+HI IPCHW +R+S + +++S+Y A    RTI+F  TK+DCNEL ++P +  D Q LHGDI Q  RE T+  F++G  ++L+ATDVAARGLDM VDLV+N+EPP  Q+GR D ++YVHRSGRTGRAG+KG+CITL+TP+Q+  L  IER I N F  + AP  DD++  +A  A  +I AV+  +IDL+ + A+++
Sbjct:  208 LRLNDCKFLILDEADTMLEMGFREDIQKVFEAM-EAAKTAHQTLLFSATIPTWLDQVAKQYMKPDREFVNMVNDNEDQASKDVQHIAIPCHWQTRASLLANLLSMY-ATKTSRTIIFAETKKDCNELAVNPDIKLDAQVLHGDIAQNQREITMQAFREGKLRLLIATDVAARGLDMDVDLVINSEPPRKQTGRADVDTYVHRSGRTGRAGKKGVCITLFTPKQKDNLLHIERSIKNKFIMKSAPNVDDMITGAAATAASEIEAVNPEMIDLFMSTAKEL 484          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: A0A1V9YZB2_9STRA (RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZB2_9STRA)

HSP 1 Score: 303 bits (776), Expect = 2.810e-95
Identity = 152/276 (55.07%), Postives = 204/276 (73.91%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEKGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAA 828
            L+L+D EF+ILDEAD ML+MGF+E+++KVFEA     +   Q LLFSAT+P W+D+V K+YMK DRV+I++V +   +ASKDV+HI IPCHW +R++ + +++S Y A    RTI+F  TK+DCNEL +DP +  D Q LHGDI Q  RE T+  F++G  ++L+ATDVAARGLDM VDLV+N+EPP  QSGR D ++YVHRSGRTGRAG+KG+CITL+TPRQ+  L  IER I N F+   AP  DDI  ++A AA  +I AVD  +++L+   A
Sbjct:  223 LKLTDCEFLILDEADTMLEMGFREDIQKVFEAIAA-SKTVHQTLLFSATIPSWLDQVAKKYMKPDRVYINMVNDNEDQASKDVQHIAIPCHWQTRTTLLANLISKY-ATKTSRTIIFAETKKDCNELAVDPSIKQDAQVLHGDIAQNQREITMKAFREGKVRLLIATDVAARGLDMDVDLVINSEPPRKQSGRADVDTYVHRSGRTGRAGKKGICITLFTPRQKDNLMIIERAIKNKFTMMAAPNVDDITASAATAAAAEIEAVDAEMVELFTETA 496          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: A0A067BZY7_SAPPC (RNA helicase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZY7_SAPPC)

HSP 1 Score: 300 bits (768), Expect = 3.770e-94
Identity = 148/277 (53.43%), Postives = 205/277 (74.01%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEKGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAE 831
            L+L++ +F+ILDEAD ML+MGF+E+++KVFEA  E  +   Q LLFSAT+P W+D+V K+YMK DRV++++V +   +ASKDV+HI IPCHW +R+S + +++S+Y A    RTI+F  TK+DCNEL ++P +  D Q LHGDI Q  RE T+  F+ G  ++L+ATDVAARGLDM VDLV+N+EPP  QSGR D ++YVHRSGRTGRAG+KG+CITL+TP+Q+  L  IER I N F  + AP  DD+V  +A  A  +I  VD ++I+L+   A+
Sbjct:  223 LRLNECKFLILDEADTMLEMGFREDIQKVFEAM-EAAKTAHQTLLFSATIPSWLDQVAKKYMKPDRVYVNMVNDNEDQASKDVQHIAIPCHWQTRASLLANLLSMY-ATKTSRTIIFAETKKDCNELAVNPDIKQDAQVLHGDIAQNQREITMQAFRDGKIRLLIATDVAARGLDMDVDLVINSEPPRKQSGRADVDTYVHRSGRTGRAGKKGVCITLFTPKQKDNLLLIERSIKNKFIMKAAPNVDDMVTGAAATAASEIETVDPNMIELFLDTAK 497          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: A0A662X2W6_9STRA (RNA helicase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2W6_9STRA)

HSP 1 Score: 301 bits (771), Expect = 4.020e-94
Identity = 149/282 (52.84%), Postives = 208/282 (73.76%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGE-EGEKG--RQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAEQV 837
            L+L + EF+ILDEAD ML+MGF+E+++KVF A  + + EK   RQ LLFSAT+P WV  V  +YM++DR F++LVK+  V+AS DV+HI IPCHW  R + + +++ VYG   + RTI+F  TK+DCNEL + P++  DCQ LHGDI Q  RE+T+  F++G  ++L+ATDVAARGLDM VDLV+N+EPP   SG  D ++YVHRSGRTGRAG+KG+CITLYT RQ   L +IER IGN F+ +G P  +D++ ASA  A+ +I  VD S++++++  A ++
Sbjct:  257 LRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEQVKNEKAGRRQTLLFSATIPKWVTDVADKYMQKDREFVNLVKDSDVQASTDVQHIAIPCHWQGRPTLLANLLGVYGKK-DTRTIIFAETKKDCNELAVHPEIKQDCQVLHGDIAQDQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMSGFADVDTYVHRSGRTGRAGKKGICITLYTNRQSDSLTQIERKIGNKFTMKGPPDQEDLIKASAAKALKEIENVDPSMVEIFQEKANEL 537          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: K3WZA1_GLOUD (RNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZA1_GLOUD)

HSP 1 Score: 300 bits (769), Expect = 6.320e-94
Identity = 149/281 (53.02%), Postives = 205/281 (72.95%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGE--EGEKGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAEQV 837
            L+L + EF+ILDEAD ML+MGF+E+++KVF A  +    +  RQ+LLFSAT+P WV +V  +YMK+DR +++LVK+   KAS DV+HI IPCHW  R + + +++ +Y A  N RTI+F  TK+DCNEL + P++  D Q LHGDI Q  RE+T+  F++G  ++L+ATDVAARGLDM VDLV+N+EPP   SG  D ++YVHRSGRTGRAG+KG+CITLYT RQ   +  IER IGN F  RG P  DD++  SA  AI++I AVD ++I L++  A+++
Sbjct:  248 LRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEKVKNEQMKRQILLFSATIPSWVKEVADKYMKKDREYVNLVKDSDNKASMDVQHIAIPCHWQGRPTLLANLLGIY-AKKNSRTIIFAETKKDCNELAVHPEIKQDAQVLHGDIAQDQRETTMKAFREGKLRLLIATDVAARGLDMNVDLVINSEPPRKASGNADVDTYVHRSGRTGRAGKKGICITLYTQRQLDAVQYIERTIGNKFIMRGPPDQDDLIKVSAAKAIEEIEAVDPTMISLFEEKADEL 527          
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Match: A0A6G0RJ92_9STRA (RNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RJ92_9STRA)

HSP 1 Score: 299 bits (765), Expect = 3.350e-93
Identity = 147/282 (52.13%), Postives = 206/282 (73.05%), Query Frame = 1
Query:    1 LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGE---EGEKGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKAAAEQV 837
            L+L + EF+ILDEAD ML+MGF+E+++KVF A  +   E    RQ LLFSAT+P WV  V  +YM++DR +++LVKE   +AS DV+HI IPCHW  R + + +++ +Y A  + R+I+F  TK+DCNEL + P++  DCQ LHGDI Q  RE+T+  F++G  ++L+ATDVAARGLDM VDLV+N+EPP   SG  D ++YVHRSGRTGRAG+KG+CITLYT RQR  L +IER IGN F+ +G P  +D++ ASA  A+ +I  VD S+I++++  A ++
Sbjct:  259 LRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEQVKNESAATRQTLLFSATIPKWVKDVADKYMQKDREYVNLVKESDSQASTDVQHIAIPCHWQGRPTLLANLLGIY-AKKDSRSIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMSGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLTQIERKIGNKFTMQGPPDQEDLIKASAAKALTEINNVDPSMIEIFQEKASEL 539          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12290.1917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2L3_ECTSI8.260e-19398.57RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A836CJP1_9STRA1.400e-12867.50RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7R9U1A7_9STRA8.020e-10760.42RNA helicase n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
K8YSG2_NANGC7.840e-10557.86RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A1W0A9D4_9STRA5.570e-9653.05RNA helicase n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A1V9YZB2_9STRA2.810e-9555.07RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772... [more]
A0A067BZY7_SAPPC3.770e-9453.43RNA helicase n=2 Tax=Saprolegnia TaxID=4769 RepID=... [more]
A0A662X2W6_9STRA4.020e-9452.84RNA helicase n=2 Tax=Nothophytophthora sp. Chile5 ... [more]
K3WZA1_GLOUD6.320e-9453.02RNA helicase n=1 Tax=Globisporangium ultimum (stra... [more]
A0A6G0RJ92_9STRA3.350e-9352.13RNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12290contigEcto-sp13_S_contig12290:539..5109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score555.4
Seed ortholog evalue1.5e-155
Seed eggNOG ortholog2880.D7G2L3
Preferred nameDDX21
Model size867
KEGG koko:K13183,ko:K16911
KEGG Pathwayko01110,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005886,GO:0006139,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010501,GO:0010604,GO:0010628,GO:0014070,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017069,GO:0017111,GO:0018130,GO:0019222,GO:0019438,GO:0019843,GO:0030515,GO:0031974,GO:0031981,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035198,GO:0040029,GO:0042221,GO:0042623,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043330,GO:0043331,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050896,GO:0051704,GO:0051707,GO:0060255,GO:0061980,GO:0065007,GO:0070013,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097322,GO:0097659,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901698
Exons6
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-11_002660.1
EC3.6.4.13
Cds size867
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03036,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12290.1917.1prot_Ecto-sp13_S_contig12290.1917.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12290 539..5109 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462653.604075-CDS-Ecto-sp13_S_contig12290:538..7141681462653.604075-CDS-Ecto-sp13_S_contig12290:538..714Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12290 539..714 -
1681462653.621319-CDS-Ecto-sp13_S_contig12290:1904..21091681462653.621319-CDS-Ecto-sp13_S_contig12290:1904..2109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12290 1905..2109 -
1681462653.629784-CDS-Ecto-sp13_S_contig12290:2677..27671681462653.629784-CDS-Ecto-sp13_S_contig12290:2677..2767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12290 2678..2767 -
1681462653.6409981-CDS-Ecto-sp13_S_contig12290:3506..36211681462653.6409981-CDS-Ecto-sp13_S_contig12290:3506..3621Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12290 3507..3621 -
1681462653.6540728-CDS-Ecto-sp13_S_contig12290:4200..43971681462653.6540728-CDS-Ecto-sp13_S_contig12290:4200..4397Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12290 4201..4397 -
1681462653.667569-CDS-Ecto-sp13_S_contig12290:5025..51091681462653.667569-CDS-Ecto-sp13_S_contig12290:5025..5109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12290 5026..5109 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12290.1917.1

>prot_Ecto-sp13_S_contig12290.1917.1 ID=prot_Ecto-sp13_S_contig12290.1917.1|Name=mRNA_Ecto-sp13_S_contig12290.1917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
LQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEKGRQMLLFSATM
PPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTIN
DIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRE
STLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYV
HRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFSWRGAPQPDDIV
NASAGAAIDDIRAVDDSVIDLYKAAAEQVPNDSLIFSK*
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mRNA from alignment at Ecto-sp13_S_contig12290:539..5109-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12290.1917.1 ID=mRNA_Ecto-sp13_S_contig12290.1917.1|Name=mRNA_Ecto-sp13_S_contig12290.1917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4571bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12290:539..5109- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCAGCTCTCTGACGCGGAGTTCATCATCCTCGACGAGGCCGACCAGAT GCTCGACATGGGGTTCAAGGAGGAGATGGAAAAGGTGAGTGGCGACGGCG ACGGCGGGGGGTAGGGTGAAAATGCTTCCGCGGTTGTGGCGGTTGACCAA GCGTCCTCGATAGGACGGAGCATGGGGGGAGCATGATGCTGAGGAGTAGT AGTTGGCGCGATGAATGTTGAGAGTTTGAGAGACGTGTTCATGCCAGAGC TGAGACTCGGAATGAGCCTTCGTTCAGGAAATGAACAAGAGACACGGGGT CTTGAATGTTGGTCACCGTTCGCTTCGGCTAAGATTGCAGCGGAAACCCC TTTCTCCCTGCTGACTTTTCGCCGAAAAGGTCAGTTTTTTTTTTGCGAAG TACGCCCGGCCGGCTGCTCTTGCCTTGGCTGTCTTACCATTTCCTAGCAA AGCTTGGAGTAGGGCGTTCATTCTCAATCCGTCAAAACGAGTCAAAGCTC TTACAATGCTCTACTGCGGCAACCGCTGTTGGCAGAACCAAATACAGGTC TCGGTCTCCACCAAATTCATTCTCTTTTGTGTTGTTGTATTTTTTTATTT GGAGAGCCTTCTGTAGAAGGTGGCGAAGCCAGTCACCATTCGCTCGAGAC CTCTTGTGCAACTTGAACCTGTGCATCACGGGCGCGTCTCGAAACAAAAC AACGCGGGGCAGGTCTTCGAGGCGTGTGGGGAGGAGGGGGAGAAGGGCCG CCAGATGCTGCTCTTCAGCGCAACGATGCCTCCATGGGTGGACAAGGTGG TGAAGGAGTACATGAAGGAGGACCGCGTGTTTATCGACCTCGTCAAGGAG GGGACAGTGAAGGCCTCCAAGGACGTGGAGCATATCGGCATCCCCTGCCA TTGGACGAGGTGTGTTGCTGTGTGTTTGCCCCGGCCCCTCCTCCATCTGT CTCTCTGTCTGTCTGTCTCTTTCTCTCTGGAATGCCTTCGTTTCTTCGTA TTGTACAGTCTCATAAAAGAACAGGCGTGATGATTTAGCCAAAGGGTGTC ATTGCAGTTCGTCGTACGCCGCTCATTTGGTTTATCTTTGGTTCCTCTTG GCGCTGCTGCTGCTACCCCTTTGATGTCATGAATTTGGTCTTCCTGTCGT GTTATCCCCCGCGCGCACGATGTGATGTTGTTGTGCGATTACATCCTTTC GAGCATCAGCTACTGCTGTAGGACCGCGTTTTGATACAATCGTTGGGACG TTTGGTTCATCCACTGCGTATTGTTCCAACATTCTTGGCAGGAAACGTTC GTGCCTCCATCTGGAGCAGAGTAGTAGTTGGTTTTGGCGGTGCCCAACTT CCTAGCCCATGCTCGCGCTGATTTGTCTCCTTCCTACCACGCCAGGCAGG CACAGACCGGCGAGCAACCGGAACTGAATGCCTACCTTTTATATGTGTGT GTGCTTTTCGTGTTCCCCGTCCTTGCCGTTGTACACAGCCGGTCGAGCAC GATCAACGATATCGTGAGCGTGTACGGGGCCGGCGGCAATAAGCGGACCA TCGTGTTCTGCACCACGAAGCGTGACTGCAACGAGCTGTGCATGGACCCC AAGGTGGGGGAAGGGTGGGGGTGCATAGAAGCAGTTACGGCGCTATGCAG CAGCAGCAGCAGCAGCAGCAGCAGCATCAGCGGAAAGTGAGCGTTGCGGT TGAACGCGCTGCTACTTTGAGACCGGACGACCGTCTGAGCGTTCAAACCA CGGGTTCGTGAACGAGTTGGGTCATTTCCTCTCACCAACAGCTTGCTGAG CCATCTACGGCAACCCGCATCATTGTTTATTTCGTGACGCACAAGTCTAC CAGCACATGCCGCCCGAGACGTTGGAGTCGTCGCCTTGTAGATAAGCGTC TTTTTGTCTTTGTCACTTGTTTTGGTTGTAGTAGCTTTTGTCGTTGTTGT CTTTTGCTTTCACGCTTCTGCCCGTACACCTGTAGAGATACTTCGTTTCT TTCCCGTACAGGGTGTGTTTTTTTGGGCGTTTCACCCGTCCGTCCGCATC AGGTTAGGTTTGCGTGGATACCGCTGGTGGCCCCTGTCAACTGGTGCGGC TGTCGTTCTCGCTCTTCCTGTTTCTGTGGCTGTCGCTGCCGGAGGCAATC TGTCCGCTTCAAAGCAAGCAGCCCCTTGTGCTTTTTTTTGTCAAGAAGAG ATAGGGTGCATGACGGGTGTGATCGTGAGTCGATGCACACGATGACGCCG TTTTCTTTGCCGCCGGGGTTGTCGCTGCTGCTGCTGCTGCTGCTGCTGCT GCCGGCGGGGGTGTCTCCGCTTTGGATTTGTTGGTGGATCAGATGACATA CGACTGCCAGGCACTGCACGGAGACATCACCCAGGCAAATCGGGAGTCGA CGCTAGCCGGGTTCAAGAAGGGCTCTTTCAAGGTGGGGGCGACGTGTATC GCGGCATACGCACGGGGGGGAGGGGTGATGGTCGTGCCTACAAAGTTCTT TTCAAAGAGTTCCATGATCGTCCCTCTCCGTTTTCTCGACGATAGCTTTC CGATCGTGACACCGCCCACATCATCATGTGCATCCGTTTTCCCCTTTTTT TTTTGCTCTCTTGACAGACGACAGGAGTGGAATTAGTCGCGGCTGTTCCA CCTGCCGTAACTCTTTTGTGCAATGTCGTTCCCTGCTCTGGGAGTGTTTG GCAAATGTGACCCGTGTATGGAAATGCCAATAAGGGGTTCCGTAACTCTT TGCATTCCCGCCCACATTCACTGGTGCCCTCCCTCGCAACACACGCGATG GTCACTTCATAAGACATGTTGAAGGCCACGAGATGTAAGCAGAAGAGAAG TACTTGGTGCGAGTAGAAGAAACAAATGCATCTCGATCCAAGATAGGGGT CTGTAGAAGGATAGATTAGCGCCTCTTTTTTGTTTTGCGCTCACGCCGTT GCCCTCATTCGGACGACCCGATACTCCTACGACACGATGGCACGAACAAG GTCCTGGTGGCTACCGACGTTGCCGCCCGGGGCCTGGACATGATTGTAGA CCTCGTGCTCAACGCCGAGCCGCCCACACACCAGTCCGGCCGCGTGGACA CGGAGTCGTACGTTCACCGCTCCGGGAGGACCGGGAGGGCCGGGCGCAAG GGCATGTGCATCACGCTCTACACGCCCCGCCAGCGGGGGGGGCTGGGCGA GATCGGTGAGGGTGTGTGTGGGTAGTTCGCGCAATGGGGTTTTTGCGTAC GTGCGTCGTGCACATTTAGAACATTTTTGTTCAAGTGCCCCTAAGAATAG TTTTTCCCAGATGAGACGTTGAATGTAACGGCGGCGGGGCCTCTCTACAA TATTTTCCTCTACAATGCGTCATATGTACATATAAGATTTGGTCACTTTT CATGCCTCGGCACTTATCTCTCTCGCCCCATCGAGTCTTCCCTCGCGGTT CCTTCTCAGGGGCACGCACGAGACCCGTCGGTACATTAACGCCCGTGTCC GGGGCTCGGCAGACCTCCGTGGCGCGTGTAGTCAACCGTCGAAGTTGCGA AAATTGGTTCAAAACCCAGGGGACGCGTTCCGCGAGAACAAGTGCCTCCA GAACTAATTGCTGAAACCTCTCTGTTGCATACGAGGAGATGCTTCCCCGA GCTGGTTTCCCCCGCAAGTTCAGAGAACACTGTAGCATACTGTTTGGAAT CATTTCGATGGTTCCGATCGGTGTAGCACCATAAAGCAGCCTTTACACTA CTATGTATGTCCATGCGTACGTTTCCATGTAACCAACGTGGTTCTTCACC CACAGCTTCGGGGCCGCGACTCTGCTTTGAACTCTCACCTCCGGTTTGCG ATTGTTTTGTGTGGAAGATACATGTTCACAGACCCATGGAACGGTTGATA TGAACACGTCATGCGAGTCACAGATTTTTTCGGATCTTTTTTTTCATAGG TCAAATCTCCGATATTCTGCGAATGGGTGCGGGCCATGAGGTGTACGCTC CCCACAGGGGGATTCACAACAGCAGCAACACGGAGAGATTGTCTCTCGGA GCGATGTCGATGTCGCCAACGCTCCTTGGAGAACGTTCCCCGCATTCTCC TCGGAGAGATTGTCTCTCGGAGCGATGTCGATGCCTCCTCCGTCTCATGA TACATGCGATGTTTTGTACGGGGGCCAGCACTACCGAACTTTGCAATCCA TGACTTCACTACGTCCTTTCCTACTTGCGTCACCCCCGGGGGACTGACAC CAACGTCCCGAAAGGGGGACCTTGTACATCTAAATGTTTTTTTTGCGTTC AGTGAAACTTTGCGTTCAGTGAAAATCACACCACGTGTTTACCTCGTTAT GCCACCCGTGTTGGTGTTTTTTCTCCCGCTTGGTTAACGATACAGAACGC CATATCGGCAACGACTTCTCGTGGCGGGGGGCTCCGCAGCCTGACGACAT CGTTAACGCCTCCGCCGGTGCGGCGATCGACGACATACGAGCGGTGGACG ACAGCGTCATCGATCTATACAAGGCCGCCGCCGAGCAGGTGCCCAACGAT TCATTGATTTTTTCTAAATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12290:539..5109-

>mRNA_Ecto-sp13_S_contig12290.1917.1 ID=mRNA_Ecto-sp13_S_contig12290.1917.1|Name=mRNA_Ecto-sp13_S_contig12290.1917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12290:539..5109- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCAGCTCTCTGACGCGGAGTTCATCATCCTCGACGAGGCCGACCAGAT
GCTCGACATGGGGTTCAAGGAGGAGATGGAAAAGGTCTTCGAGGCGTGTG
GGGAGGAGGGGGAGAAGGGCCGCCAGATGCTGCTCTTCAGCGCAACGATG
CCTCCATGGGTGGACAAGGTGGTGAAGGAGTACATGAAGGAGGACCGCGT
GTTTATCGACCTCGTCAAGGAGGGGACAGTGAAGGCCTCCAAGGACGTGG
AGCATATCGGCATCCCCTGCCATTGGACGAGCCGGTCGAGCACGATCAAC
GATATCGTGAGCGTGTACGGGGCCGGCGGCAATAAGCGGACCATCGTGTT
CTGCACCACGAAGCGTGACTGCAACGAGCTGTGCATGGACCCCAAGATGA
CATACGACTGCCAGGCACTGCACGGAGACATCACCCAGGCAAATCGGGAG
TCGACGCTAGCCGGGTTCAAGAAGGGCTCTTTCAAGGTCCTGGTGGCTAC
CGACGTTGCCGCCCGGGGCCTGGACATGATTGTAGACCTCGTGCTCAACG
CCGAGCCGCCCACACACCAGTCCGGCCGCGTGGACACGGAGTCGTACGTT
CACCGCTCCGGGAGGACCGGGAGGGCCGGGCGCAAGGGCATGTGCATCAC
GCTCTACACGCCCCGCCAGCGGGGGGGGCTGGGCGAGATCGAACGCCATA
TCGGCAACGACTTCTCGTGGCGGGGGGCTCCGCAGCCTGACGACATCGTT
AACGCCTCCGCCGGTGCGGCGATCGACGACATACGAGCGGTGGACGACAG
CGTCATCGATCTATACAAGGCCGCCGCCGAGCAGGTGCCCAACGATTCAT
TGATTTTTTCTAAATGA
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