mRNA_Ecto-sp13_S_contig7895.19170.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 476 bits (1224), Expect = 1.570e-168 Identity = 233/272 (85.66%), Postives = 250/272 (91.91%), Query Frame = 1
Query: 1 MEFSCIDPNAACGDDDDITVDMLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKVHVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEVSV 816
MEF+CIDP+A C DDDD+TVDM+ENCG V GIGNG CDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDP+ASCFGEGTT SDDF+F DD + MSYEF++W+ETESLP V+DAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGC ATNTRDGI SDIESRWSCATSLVPDEGPCQIEF FAEPQNIVDIQVAFW NER TL+VHV+GELTHTHE Y D TF+TLGVTA EA+TVMLESVALLSDEWISL+EV +
Sbjct: 1 MEFACIDPSAPCVDDDDVTVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPTASCFGEGTTGSDDFSFHDDYQPMSYEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEVQI 271
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 474 bits (1221), Expect = 2.170e-161 Identity = 232/272 (85.29%), Postives = 250/272 (91.91%), Query Frame = 1
Query: 1 MEFSCIDPNAACGDDDDITVDMLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKVHVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEVSV 816
MEFSCIDP+A C +DDD+T+DM+ENCG V GIGNG CDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTT SDDF+F DD + MSYEFV+W+ET+SLP V+DAVEVGTKTEVGVSATAHD+RPGSSG DVGCGEVGGLGC ATNTRDGIFSDIESRWSCATSLVPDEGPCQIEF FAEPQNIVDIQVAFW NER TL+VHV+GELTHTHE Y D TF+TLGVTA EA+TVMLESVALLSDEWISL+EV +
Sbjct: 462 MEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTGSDDFSFHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEVQI 732
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 444 bits (1142), Expect = 1.940e-152 Identity = 217/270 (80.37%), Postives = 239/270 (88.52%), Query Frame = 1
Query: 1 MEFSCIDPNAACGDDDDITVDMLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKVHVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEV 810
MEF+CIDP+A C DDDDITVDM+ENCG V GIGNG CDRNNNKEECGYDGGDCCSCTC+S YDDDYSCSSEYG FDC+DP+ASCFGE T SDDF+ DD + MSYEFV W+ETE+LP V AVEVGTKTEVGVS+TAHDVRPG S D GCGEVGGLGC ATNTRDGIFS+IESRWSCAT LV DEGPCQIEF FAEPQ I+DIQVAFWKGNERTRTL+VH++GE+THTHE Y D+TF+TLGVTA + +TVMLESVALLSDEWISL+EV
Sbjct: 242 MEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPTGSDDFSTDD--QPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 509
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 1.040e-142 Identity = 220/319 (68.97%), Postives = 237/319 (74.29%), Query Frame = 1
Query: 4 EFSCIDPNAACGDDDDITVDMLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKV-------------------------------------------------HVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEVS 813
EFSCIDPNAAC DDDITVDM ENCG V GIGNG CDRNNNKEECGYDGGDCCSCTCQS YDDDY CSSEYG FDCQDP+ASCFGE +T SDD++ DD E MSYEFV W+ETE+LP V AVEVGTKTEVGVSATAHDVR G S DVGCGEVGGLGC ATNTRDGIFS+IESRWSCAT LV DEGPCQIEF FAEPQ I+DIQVAFWKGNERTRTL+V H++GE+THTHE Y D+TF+ LGVTA + +TVMLESVALLSDEWISL+EVS
Sbjct: 143 EFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDD--EPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEVS 459
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 411 bits (1056), Expect = 4.130e-138 Identity = 215/272 (79.04%), Postives = 229/272 (84.19%), Query Frame = 1
Query: 7 FSCIDPNAACGDDDDITVDMLENCGNVRGIGNG--RCDRNNNKEECGYDGGDCCSCTCQSAYD--DDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKVHVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEV 810
F+CIDP AAC +DDDITVDM NC IGNG R R GYDGGDCCSCTCQ+A+D DDYSCSSEY DC+DP+ASCFGEGTT SDDFTF DD + SYEFV W+ETESLP VIDAVEVGTKTEVGVSATAHDVRP SS DDVGCG+VGGLGC ATNTRDGI SDIESRWSCAT LVPDEG CQIEF FAEPQN+VDIQVAFWKGNERTRTL VHV+GELTHTHE Y DSTF+TLGVTA EA+TVMLESVALLSDEWISL+EV
Sbjct: 334 FACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTTGSDDFTFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEV 605
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 3.970e-137 Identity = 221/336 (65.77%), Postives = 238/336 (70.83%), Query Frame = 1
Query: 4 EFSCIDPNAACGDDDDITVDMLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKV------------------------------------------------------------------HVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEVS 813
EFSCIDPNAAC DDDITVDM ENCG V GIGNG CDRNNNKEECGYDGGDCCSCTCQS YDDDY CSSEYG FDCQDP+ASCFGE +T SDD++ DD E MSYEFV W+ETE+LP V AVEVGTKTEVGVSATAHDVR G S DVGCGEVGGLGC ATNTRDGIFS+IESRWSCAT LV DEGPCQIEF FAEPQ I+DIQVAFWKGNERTRTL+V H++GE+THTHE YTD+TF+ LGVTA + +TVMLESVALLSDEWISL+EVS
Sbjct: 505 EFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDD--EPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTATDVSTVMLESVALLSDEWISLIEVS 838
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 2.210e-136 Identity = 199/272 (73.16%), Postives = 222/272 (81.62%), Query Frame = 1
Query: 1 MEFSCIDPNAACGDDDDITVDMLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTT--RSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKVHVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEV 810
M+FSCIDPNA C +DDDITVDM +NCG V GIG+G CD NNNKE CGYDGGDCCSCTC+S +DDDY+C E +FDC+DPSA+CFGE T DD T D YEFV W++TE LP V DAVEVGTKTEV VSATAHDVR G S +VGCGE GG GCAA N RDGI ++IESRWSCA L+ DEGPCQIEF FAEPQNIVDIQVAFWKGNER RTL+V+V+GELTHTHE Y DSTF+TLGVTA EANTVMLESV+LLS+EWISL+EV
Sbjct: 30 MQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCG-EDAFFDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEV 300
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 2.680e-136 Identity = 198/268 (73.88%), Postives = 228/268 (85.07%), Query Frame = 1
Query: 7 FSCIDPNAACGDDDDITVDMLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKVHVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEV 810
F+CIDP A C DDD +TVDM++NC +R +GNG CD NN E C YDGGDCC CTC+SA++DDY+CSSE+G F+C+DP+ASCFGE TT SDDF+ DD + MSYEFV W+ETE+LP V AVEVGTKTEVGVS+TAHDVRPG D GCGEVGGLGC A NTRDGIFS+IESRWSCAT LV DEGPCQIEF FAEPQ IVDIQVAFWKGNERTRTL+V+++GE+THTHE Y D+TF+TLGVTA + +TVMLESVALLSDEWISL+EV
Sbjct: 221 FACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETTGSDDFSTDD--QPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 482
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 348 bits (893), Expect = 1.010e-118 Identity = 173/228 (75.88%), Postives = 198/228 (86.84%), Query Frame = 1
Query: 127 KEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKVHVDGELTHTHEFYTDSTFSTLGVTAIEANTVMLESVALLSDEWISLVEV 810
K + YDGGDCC CTC+SA++DDY+CSSE+G F+C+DP+ASCFGE TT SDDF+ DD + MSYEFV W+ETE+LP V AVEVGTKTEVGVS+TAHDVRPG D GCGEVGGLGC A NTRDGIFS+IESRWSCAT LV DEGPCQIEF FAEPQ IVDIQVAFWKGNERTRTL+V+++GE+THTHE Y D+TF+TLGVTA + +TVMLESVALLSDEWISL+EV
Sbjct: 10 KTKLSYDGGDCCECTCESAWNDDYTCSSEHGIFNCKDPNASCFGEETTGSDDFSTDD--QPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 231
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Match: D7FL19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL19_ECTSI) HSP 1 Score: 303 bits (776), Expect = 2.540e-101 Identity = 149/200 (74.50%), Postives = 168/200 (84.00%), Query Frame = 1
Query: 64 MLENCGNVRGIGNGRCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTRSDDFTFDDDDETMSYEFVTWKETESLPMVIDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCAATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFFFAEPQNIVDIQVAFWKGNERTRTLKV 663
M++NC +R +GNG CD NN E C YDGGDCC CTC+SA++DDY+CSSE+G F+C+DP+ASCFGE TT SDDF+ DD + MSYEFV W+ETE+LP V AVEVGTKTEVGVS+TAHDVRPG D GCGEVGGLGC A NTRDGIFS+IESRWSCAT LV DEGPCQIEF FAEPQ IVDIQVAFWKGNERTRTL+V
Sbjct: 1 MIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGIFNCKDPNASCFGEETTGSDDFSTDD--QPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEV 194 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7895.19170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7895.19170.1 >prot_Ecto-sp13_S_contig7895.19170.1 ID=prot_Ecto-sp13_S_contig7895.19170.1|Name=mRNA_Ecto-sp13_S_contig7895.19170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp MMTTTLAAASTATSTAKTLAPPASAKEQRGAMTSPSTTTTRQCRTNSSPGback to top mRNA from alignment at Ecto-sp13_S_contig7895:2754..4907- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7895.19170.1 ID=mRNA_Ecto-sp13_S_contig7895.19170.1|Name=mRNA_Ecto-sp13_S_contig7895.19170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2154bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7895:2754..4907- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7895:2754..4907- >mRNA_Ecto-sp13_S_contig7895.19170.1 ID=mRNA_Ecto-sp13_S_contig7895.19170.1|Name=mRNA_Ecto-sp13_S_contig7895.19170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=474bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7895:2754..4907- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |