mRNA_Ecto-sp13_S_contig7894.19168.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7894.19168.1
Unique NamemRNA_Ecto-sp13_S_contig7894.19168.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: D7FVK8_ECTSI (Asparagine synthetase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK8_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 1.760e-165
Identity = 246/259 (94.98%), Postives = 249/259 (96.14%), Query Frame = 1
Query:    1 PDYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSGGLTTPVGEQQKESDVNTKNLDGVEVYRVHGSAAAARGAGS 777
            PDYIANEGQSCFHCKTHLYSALEAVA QAGVESR SS AAVGDGEPS SALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPID LTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPE+LVLVEKAEDAARKRLDLGVS+NLRVRAMHGNKALLEVDAGEI EEAL SIEDIRSLILPLGF EVDVRPFRSGAVSGGLTTPV EQQKES+VNTKNLDGVEVYRVHGS AAARGAGS
Sbjct:   89 PDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPEKLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGGLTTPVAEQQKESEVNTKNLDGVEVYRVHGSTAAARGAGS 347          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A836CNR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR6_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.700e-62
Identity = 121/219 (55.25%), Postives = 140/219 (63.93%), Query Frame = 1
Query:    1 PDYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSG 657
            P+YIAN GQSC+HCK+HLYSALEA+AA A       +G   GDG+                      R VLFNGTN++D+ DTTRVGLKAAA++ V+SPIDTLTKA+VRAVAR L LPNW+HAASPCLRSRLAFGV ATP  L  VE+AE AAR  L LG  +NLRVRAM   +AL+EVDA  +                       DVR FRSGAVSG
Sbjct:   87 PEYIANRGQSCYHCKSHLYSALEAIAADATAAVHSRNG---GDGDS---------------------RNVLFNGTNQEDRSDTTRVGLKAAAEYSVSSPIDTLTKAQVRAVARALALPNWDHAASPCLRSRLAFGVAATPASLARVERAEAAARALLALGPRDNLRVRAMAAERALVEVDAARLXXXXXXXXXXXXXXXXXXXXXX-DVRAFRSGAVSG 280          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A6V1PUF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUF6_HETAK)

HSP 1 Score: 189 bits (479), Expect = 1.910e-55
Identity = 107/218 (49.08%), Postives = 133/218 (61.01%), Query Frame = 1
Query:    4 DYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSG 657
            DYIAN+G++C+HCKTHLYS+L AVA     E   + G  +G                     +G  +V+LFNGTNKDD RD TR+GLKAA +F+VASP+  +TK EVR  A+ LGLPNW HAASPCLRSRLAFGV AT E L  ++KAE   R+ L LG   NLRVRA +  +A + VD   + E        I   IL LGF  V  R +R+G +SG
Sbjct:   91 DYIANKGKACYHCKTHLYSSLMAVA-----ELAAAKGNIIG--------------------TDGKEKVILFNGTNKDDLRDDTRIGLKAAENFKVASPLAEITKDEVRLAAKALGLPNWQHAASPCLRSRLAFGVAATKENLERIDKAEAIVRRHLGLGPEVNLRVRAANPTRAAVAVDQS-LLEAVATHFPRIEEKILALGFKNVSFRAYRTGMMSG 282          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: H3GU42_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GU42_PHYRM)

HSP 1 Score: 182 bits (461), Expect = 1.810e-52
Identity = 109/235 (46.38%), Postives = 142/235 (60.43%), Query Frame = 1
Query:    7 YIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSGGLTTPVGEQQKESDVNTK 711
            Y+ANEG+SC+ CKT LY  L  VAA A  E + +     GDG+  +                   + VL+NGTN DD+ D TRVGL AA++F V SP+  LTK EVR VA+ LGLPNWN AASPCLRSRL FGV+AT + L  VEKAED  R  + L    ++RVR + GN+A +E+D  E  E+A+  +E I + +  LGF++VDVR FRSG++SG     V E    S    +
Sbjct:   98 YVANEGKSCYFCKTTLYETLNQVAAFAWQEVQSN----FGDGDRLK------------------MKPVLYNGTNADDQLDPTRVGLVAASEFDVVSPLSGLTKQEVRDVAKYLGLPNWNAAASPCLRSRLQFGVEATQQHLHRVEKAEDFVRGLIQLESHRSMRVRFLAGNRAAVELD-NEALEKAVAQLETIDAELRRLGFTDVDVRAFRSGSLSGYNPNAVVEHTPASSTTAR 309          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A024U4X0_9STRA (NAD_synthase domain-containing protein n=6 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4X0_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.570e-52
Identity = 98/224 (43.75%), Postives = 133/224 (59.38%), Query Frame = 1
Query:    1 PDYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSGGLTTP 672
            P Y+ N+GQSC++CKT+LY+ L  VA +   +S                                G   VLFNGTN DDK D TR+GL AA +FQV SP++ LTKA VR +++++GLPNWN+AASPCLRSRLAFGV A P+ L  +EKAE A R  + L   +NLRVR +  N+A +E+DA  +       ++ I+ +   LGF +  VRPF+SG++SG    P
Sbjct:   85 PRYVENKGQSCYYCKTNLYTTLSQVAERVKAQSP-------------------------------GVAPVLFNGTNADDKFDPTRLGLVAATEFQVVSPLENLTKASVRQISKQIGLPNWNYAASPCLRSRLAFGVAANPDHLARIEKAEHAVRSTVALTPVDNLRVRFLAHNRAAVELDAATVRALLPRQVDAIQVICKELGFDDAIVRPFKSGSLSGFSAAP 277          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A6G0W843_9STRA (Asparagine synthetase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W843_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.810e-50
Identity = 100/227 (44.05%), Postives = 136/227 (59.91%), Query Frame = 1
Query:    1 PDYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSGGLTTPVGE 681
            P Y+ N GQSC++CKT+LY+ L  VA+   V+S                             +  G   +L+NGTN DDK D TR+GL AA +F+V SP++ LTKAEVR  ++ELGLPNWN+AASPCLRSRLAFGV AT E L  +E+AE A R  + L  S+N+RVR +  N+A +E+DA          ++  + +   +GF +  VRPF+SG+VSG  +T V E
Sbjct:   84 PRYVENIGQSCYYCKTNLYTTLNQVASH--VKSN----------------------------IPEGTVPILYNGTNSDDKLDPTRLGLIAANEFRVVSPLEDLTKAEVRQASKELGLPNWNYAASPCLRSRLAFGVSATKEHLSRIERAERAIRSMMALKPSDNMRVRFLAQNRAAVELDASRQQSLLPEEVQAAQEICKQIGFVDAIVRPFKSGSVSGFQSTVVKE 280          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A485LSD2_9STRA (Aste57867_23475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSD2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 3.230e-50
Identity = 95/223 (42.60%), Postives = 134/223 (60.09%), Query Frame = 1
Query:    1 PDYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSGGLTT 669
            P Y+ N+G+SC++CKT+LY+ L  V +    +             P+E+                  + +LFNGTN DDK D TR+GL AA++F V SP++ L K  VR +++ELGLPNWN+AASPCLRSRLAFGV AT + L  +EKAE+  R  L L  ++NLRVR + GN+A +EVD  ++       I  ++      GF+ VDVR F+SG++SG  T+
Sbjct:   84 PRYVENKGKSCYYCKTNLYTTLNQVVSHIKTQM------------PAEA------------------KPILFNGTNADDKLDPTRLGLVAASEFHVVSPLEALAKTSVRELSKELGLPNWNYAASPCLRSRLAFGVAATRDHLARIEKAEETVRSHLALTRADNLRVRFLAGNRAAIEVDLKKLESLLPTDIHSVQEACEKFGFAAVDVRAFKSGSLSGYSTS 276          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A484EI14_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EI14_BRELC)

HSP 1 Score: 174 bits (442), Expect = 8.380e-50
Identity = 106/223 (47.53%), Postives = 135/223 (60.54%), Query Frame = 1
Query:    7 YIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPLGFSEVDVRPFRSGAVSGGLTTPV 675
            Y+AN+GQSC++CKT LYS L  VA  A  E +    A +   EP                       VL+NGTN DD  D+TRVGL AA++F V SP+  LTK EVR VA+ LGLPNWN +ASPCLRSRL FGV+AT + L  VE+AED  RK + L    N+RVR + GNKA +E+D  E  E+A    + I S +  LGF+ V +R FR+G++SG   T V
Sbjct:   99 YVANQGQSCYYCKTTLYSTLVQVAEFAWREWQQQDQATI---EP-----------------------VLYNGTNADDLLDSTRVGLVAASEFHVVSPLSHLTKQEVRDVAKYLGLPNWNASASPCLRSRLQFGVEATEQHLYRVEQAEDFVRKSIRLRPQQNMRVRFLAGNKAAIELDE-EALEKAKVHFDTIASELRSLGFNAVKLRAFRTGSLSGYNATTV 294          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A7S1B778_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B778_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.160e-49
Identity = 111/221 (50.23%), Postives = 135/221 (61.09%), Query Frame = 1
Query:    7 YIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGR-RVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLILPL---GFS-EVDVRPFRSGAVS 654
            YIANEG +C+HCKTHLY AL AV   A           +G  +P          DG     EGGR   VL+NGTN DD RD TRVGL AA+DF+VASP+D   K  VRA AR LGLPNW HA+SPCLRSRLAFGVQAT E L  VE++E+  R  L LGV  ++RVR + G +A +E+D     + A   + +   L   L   GFS EV VR F++GAV+
Sbjct:  170 YIANEGMACYHCKTHLYQALNAVGRHAET---------MGRPDP----------DG-----EGGRPATVLYNGTNLDDTRDATRVGLLAASDFRVASPLDRTAKEGVRAAARHLGLPNWAHASSPCLRSRLAFGVQATSEHLERVERSEEFVRTVLKLGVERSMRVRMLAGGRAAVELDEVAFEDGAAVDVLERAELSKKLNQFGFSGEVIVRKFKTGAVA 366          
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Match: A0A7S2W2V8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2V8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.510e-49
Identity = 106/211 (50.24%), Postives = 133/211 (63.03%), Query Frame = 1
Query:    1 PDYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDI-RSLILPLGFSEVDVR 630
            P+Y+ANEG +C+HCK+ LY+AL AVA       R +SG  VG G P+                     VVL+NGTN DD+RD TRVGL+AA  FQVASP+  L+K EVR  A+ LGLPNWNHAASPCLRSRLA GV AT E L  +E AE   R  +   V +NLRVR +   KA++EVD+ E  E   G  +D  R+ +L LGF++V+VR
Sbjct:   88 PEYLANEGMACYHCKSELYTALGAVA-------RFASG--VGTGGPATP-------------------VVLYNGTNADDQRDPTRVGLRAAEHFQVASPVSHLSKDEVRQAAKHLGLPNWNHAASPCLRSRLALGVSATDETLRRIESAERFVRSIVPFDVHHNLRVRLLAKQKAVVEVDS-EKLELTEGLFDDTKRTELLSLGFAKVEVR 269          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7894.19168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK8_ECTSI1.760e-16594.98Asparagine synthetase domain-containing protein n=... [more]
A0A836CNR6_9STRA3.700e-6255.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1PUF6_HETAK1.910e-5549.08Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
H3GU42_PHYRM1.810e-5246.38Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A024U4X0_9STRA2.570e-5243.75NAD_synthase domain-containing protein n=6 Tax=Aph... [more]
A0A6G0W843_9STRA1.810e-5044.05Asparagine synthetase domain-containing protein n=... [more]
A0A485LSD2_9STRA3.230e-5042.60Aste57867_23475 protein n=1 Tax=Aphanomyces stella... [more]
A0A484EI14_BRELC8.380e-5047.53Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S1B778_9STRA1.160e-4950.23Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2W2V8_9STRA1.510e-4950.24Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7894contigEcto-sp13_S_contig7894:3..3493 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score470.7
Seed ortholog evalue4.4e-130
Seed eggNOG ortholog2880.D7FVK8
Model size780
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.tRNA processing
EggNOG OGs2RYIH@2759,COG1606@1
Ec32 ortholog descriptionRossmann-like alpha/beta/alpha sandwich fold
Ec32 orthologEc-15_003670.1
Cds size780
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464060.2196326-CDS-Ecto-sp13_S_contig7894:2..2561681464060.2196326-CDS-Ecto-sp13_S_contig7894:2..256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7894 3..256 +
1681464060.2314336-CDS-Ecto-sp13_S_contig7894:751..8181681464060.2314336-CDS-Ecto-sp13_S_contig7894:751..818Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7894 752..818 +
1681464060.242102-CDS-Ecto-sp13_S_contig7894:1359..14821681464060.242102-CDS-Ecto-sp13_S_contig7894:1359..1482Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7894 1360..1482 +
1681464060.2529442-CDS-Ecto-sp13_S_contig7894:2419..25091681464060.2529442-CDS-Ecto-sp13_S_contig7894:2419..2509Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7894 2420..2509 +
1681464060.2700706-CDS-Ecto-sp13_S_contig7894:3247..34931681464060.2700706-CDS-Ecto-sp13_S_contig7894:3247..3493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7894 3248..3493 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7894.19168.1prot_Ecto-sp13_S_contig7894.19168.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7894 3..3493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7894.19168.1

>prot_Ecto-sp13_S_contig7894.19168.1 ID=prot_Ecto-sp13_S_contig7894.19168.1|Name=mRNA_Ecto-sp13_S_contig7894.19168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
PDYIANEGQSCFHCKTHLYSALEAVAAQAGVESRCSSGAAVGDGEPSESA
LEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPI
DTLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAE
DAARKRLDLGVSNNLRVRAMHGNKALLEVDAGEIFEEALGSIEDIRSLIL
PLGFSEVDVRPFRSGAVSGGLTTPVGEQQKESDVNTKNLDGVEVYRVHGS
AAAARGAGS*
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mRNA from alignment at Ecto-sp13_S_contig7894:3..3493+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7894.19168.1 ID=mRNA_Ecto-sp13_S_contig7894.19168.1|Name=mRNA_Ecto-sp13_S_contig7894.19168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3491bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7894:3..3493+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCGACTACATCGCCAACGAGGGCCAGAGCTGTTTCCACTGCAAGACGCA CCTTTACTCCGCCCTAGAAGCCGTCGCGGCACAGGCGGGGGTGGAGTCCC GTTGTAGCAGCGGGGCTGCCGTGGGGGATGGAGAGCCAAGCGAGAGTGCA CTCGAGGGCGGTGGTGCTGATGGCGCCGGGGGGATTGTTGAGGGAGGGCG AAGGGTGGTGCTGTTCAACGGCACCAACAAGGATGACAAGCGCGATACCA CTAGGTGGGTGCTTGGGCCATCCTTCCTGTGGACTAGAGTACCGCGTTGT TTCAGGGTATGCGACGCTGTTGTCACTTCTCTTTTTGTGTTCCACGTGGC ATGGATGTTTGTTTTTCGCGGCAGTTGACTGCGTGTGTACAGAAGAAGAA ACATCCTCGTCGGAGGTTCCGGCATACGCTGATGCAACCCCGGCCGAAAT TGTCCTGAACACTAGACCTTCCACGCACCCAAGCCCTCCCGCAATACATG TCCCGGTGTTTACGGGATGCCAGGGTCGGTCCAAGAACTGTGTCAAGCGG GTTCGCAGTCGTAGATATCCCGTTAAACATATCCTCCACATATCAGGCCT TGGTGCGGTCTTGTTTCCTCCTGGAGTGTCTTGTGTCCCGACCAACAGCA GCGGTCCGCCTACCAGCGACGTCAGTAGGTGATGTATGTCGACCCGACCC AACCTCGCTCGTTTGTGGGACCATATTGTTGCTGTCGTTGTTGTTGCAGG GTTGGCCTGAAGGCTGCAGCAGACTTTCAGGTGGCAAGTCCGATAGACAC GTTGACGAAGGCAGAGGTGGGTGCTCCTCAGGCTCCTCGGGAACTCTTTG TCGATGGTAACGTGTTCAGTTTGTTAAGCAGGATAGATGTTCGAGCAAAG GAGATGTGAACGTGCACGTACATGGTGTTTTTTTTCATGTGTTTGCACAA ATACAGGAGGCGTTTTGGTGCAAGCCCAGTGCCTTTGAAAGGTCGTGCAG AAGAAGGGCTTTGGCGTTACGTCCGGCGACGTGGTTGTAGCGTCACAAGG GCGCGGGAGCCGTAGCCCGCTACCCATGGTATCCAGGTTGTCGCCGCTAA ACTCGAGGCGAGAAGAATGGACAAGAAGACAAGTAGGTTGGACGGGAGTC CGCATTGGCATTCCCATCGGTGGCGTATGGAAGAGTCGCAGATCTGCCAC TCGGCCCCCCAAGTTCCGACGGTGTTGACCGCATGCGTCTGCCTCTGAGT TTGTTGCCTGCGAAACCTTCCTGTAGCTCGCTCCATTCAAGCCCGTAGAT CCGTTCAAACAGTTCCTCCTTTCGTTACTGGTGGCATCCTGATCGTTCGC TTTTAAGGTGCGGGCTGTTGCCAGAGAGTTGGGTCTGCCGAACTGGAATC ACGCCGCGTCACCGTGTCTGCGGTCGAGATTAGCCTTTGGAGTGCAGGCC ACGCCGGAAAGGCTTGTTCTCGTCGAGAAGGTGCGTGCTGTGCTTGCGTT GGTCACTGTGTGTGAGCTTGTTTAGTTGAAAGTGCGTTCGTGTGTTCTCT CAATCAGCATCGACCACGCCAACCGACTGGCCAATGAAAAGTCGTCAGTC TTGTAGCGGGCTAGAACTACGAACACTTTCTAACCAACGGGTAAGGGTAA GGGTTTCTCCCGACACAAGGGGTGCAGAAGCTGGAAGACTGTGTCCGTTG GCGTGTGCGTGTTGTGCGTTTGCGCTTTCCTGTTGTCGAAACGTCCGTCC TGGCATGCCTATGTGACGACCCGCTTGGGTGGGGAGTTCTGTGTTGTAGT CAGCTCTCCCTTTTTTGGTAGAGTTTTGGTCGACAGTGCTTATGGGCTCA AGTACAGCAATGTTTGAGTCGTCACAGGAAGTTCAAGTAGCGGGAAAGGG CAGACGCCCCCCATGTCGGGCTTAGCCCAGAAAACGCGCGCAGTCTCATC GGATAAGAATCATTTGCGTATTTGTTTTGCGTGTATACAGTACGTGGTGC TCCTCGGCCACGCTGGCCCGCTAACCCCACGGAACGTACTTACCACCGAG AATCCTCGTTCGCAAATGGGCCCTTCTTGGTCCTCGTGCTTTTGTGCCAT TTCATCATCGGTGGCTACCGTCGGATAAACCTCTCTCTCGTCAAGAGGCG TCTGTCAGCGACGCGAACATAGCCTATTTCTTGTTTCATTGTCCAGCGTT GCGCATGCCGTTGACAGGAGTGAACGCTTCCTATTTCTACCGTCGGGGGA GGAAACGAGATTGCGCTTGGGCCCCGGGCATGTTCTTGAACCATTGAACT TGCAGCTTTTTGGTCGGTGTCCTCCATTTCAGCCGTGTATGACTTGACCA CTATTCTCTTTCGTTGTCTCTTGGATTAATGTTGAATTCGTGTCCCGAAA ATGTTAATGTCCCACAGGCGGAAGACGCTGCACGAAAACGATTAGACCTG GGCGTGTCCAACAACTTACGCGTGCGAGCCATGCACGGCAACAAGGCCCT GCTTGAGGTGAGTATCGCAAGCAAGCCCCCCCGTAACCCGGTCTCTGTAG AATGCTGTGACTCAAGCGCCGACGCACGGGTCCTATCATTCTCCCGCTTA TTTCCCACCAATTTTTTCAATATCACCCATTTTGTTTCCAAGCAGTTCTT TTTCTCTTTCTTGAGATGAAAGCGACGAGGCCCATTGGGCTATCTCTTGG GTAGGGGGACTGCTTTCGCACTCCTCGACGACAGCGAAAGCGCCAATGCC GATAAAGGGGTTCTTCCGAAGATGATCGCGGTTGATCTGCTGTTGTCTCG TGTTTCCCCCATTTTGACGGGGGGATAGGTTAAAGGGAATAGACTCCGCA ACCTCGGAAGCTGACCCCGATTGCCAGAATATGAAAATTAGAGCGTCTGC TGCGCCATCTTTCAGTGTTCGCACCACACGGTGTTACCGTGTTTTGTTCG TTCATGTCTTAATAGCAGGTGATGACATGTTGGTTAAAGGGAATGAGTAC GATGCACAAATGCCTTCAAATAAACGCTAGGCGTACGGCGATACAGCCAT CACCTTGGGGCGCGGTGTGCATCCCTGCCTACTGAATGACCAATATTCAC AACTGAGGGCAGCATGGTAATTTGTGTCGATTGCGTATCATTCTATTCCC CGCTGCACGAGTCACTGCTTGCGTGCGCGGCGATATTGTCTCTTATTTTG CGTGCGCGGCGATATTGTCTCTTATTTTTTCACACACAAACGCAGGTTGA TGCAGGTGAAATCTTCGAGGAAGCCTTGGGATCGATCGAGGACATTCGAT CGCTGATTCTACCGCTAGGGTTCAGCGAGGTAGACGTCCGACCCTTCCGA AGCGGGGCGGTTAGCGGCGGCCTCACGACACCGGTAGGAGAGCAGCAGAA GGAGAGCGACGTGAACACGAAAAACCTTGACGGCGTCGAGGTATATCGTG TGCACGGATCAGCGGCAGCGGCGAGAGGAGCTGGATCTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7894:3..3493+

>mRNA_Ecto-sp13_S_contig7894.19168.1 ID=mRNA_Ecto-sp13_S_contig7894.19168.1|Name=mRNA_Ecto-sp13_S_contig7894.19168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7894:3..3493+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCGACTACATCGCCAACGAGGGCCAGAGCTGTTTCCACTGCAAGACGCA
CCTTTACTCCGCCCTAGAAGCCGTCGCGGCACAGGCGGGGGTGGAGTCCC
GTTGTAGCAGCGGGGCTGCCGTGGGGGATGGAGAGCCAAGCGAGAGTGCA
CTCGAGGGCGGTGGTGCTGATGGCGCCGGGGGGATTGTTGAGGGAGGGCG
AAGGGTGGTGCTGTTCAACGGCACCAACAAGGATGACAAGCGCGATACCA
CTAGGGTTGGCCTGAAGGCTGCAGCAGACTTTCAGGTGGCAAGTCCGATA
GACACGTTGACGAAGGCAGAGGTGCGGGCTGTTGCCAGAGAGTTGGGTCT
GCCGAACTGGAATCACGCCGCGTCACCGTGTCTGCGGTCGAGATTAGCCT
TTGGAGTGCAGGCCACGCCGGAAAGGCTTGTTCTCGTCGAGAAGGCGGAA
GACGCTGCACGAAAACGATTAGACCTGGGCGTGTCCAACAACTTACGCGT
GCGAGCCATGCACGGCAACAAGGCCCTGCTTGAGGTTGATGCAGGTGAAA
TCTTCGAGGAAGCCTTGGGATCGATCGAGGACATTCGATCGCTGATTCTA
CCGCTAGGGTTCAGCGAGGTAGACGTCCGACCCTTCCGAAGCGGGGCGGT
TAGCGGCGGCCTCACGACACCGGTAGGAGAGCAGCAGAAGGAGAGCGACG
TGAACACGAAAAACCTTGACGGCGTCGAGGTATATCGTGTGCACGGATCA
GCGGCAGCGGCGAGAGGAGCTGGATCTTGA
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