prot_Ecto-sp13_S_contig78881.19163.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78881.19163.1
Unique Nameprot_Ecto-sp13_S_contig78881.19163.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig78881.19163.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 3.600e-60
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 
Query:    1 VLERGPQDDKEAHALAECVFAVATVAKGHIEAAEESLAAARDETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRLGRAMITEKF 102
            VLERGPQDDKEAHALAECVFAVA+VAKGHIEAAEE LAAAR+ETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRLGRA+ITEKF
Sbjct:  222 VLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRLGRAVITEKF 323
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78881.19163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSI4_ECTSI3.600e-6096.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21181:SF13NADH DEHYDROGENASE (UBIQUINONE) COMPLEX I, ASSEMBLY FACTOR 6coord: 9..101
NoneNo IPR availablePANTHERPTHR21181FAMILY NOT NAMEDcoord: 9..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78881contigEcto-sp13_S_contig78881:23..331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78881.19163.1mRNA_Ecto-sp13_S_contig78881.19163.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78881 23..331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78881.19163.1 ID=prot_Ecto-sp13_S_contig78881.19163.1|Name=mRNA_Ecto-sp13_S_contig78881.19163.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
VLERGPQDDKEAHALAECVFAVATVAKGHIEAAEESLAAARDETGGKLPA
GAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRLGRAMITE
KF*
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