prot_Ecto-sp13_S_contig7887.19162.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7887.19162.1
Unique Nameprot_Ecto-sp13_S_contig7887.19162.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length854
Homology
BLAST of mRNA_Ecto-sp13_S_contig7887.19162.1 vs. uniprot
Match: A0A6H5JS66_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS66_9PHAE)

HSP 1 Score: 977 bits (2525), Expect = 0.000e+0
Identity = 646/818 (78.97%), Postives = 656/818 (80.20%), Query Frame = 0
Query:    1 MSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQASNGTAPQPPSARSTAIKPVAKTGADAAAXXXXXXXXXXXXXXXXXXXXX---CGGASRRQIRPPAIVDAIATSNEEYAANIEHAYGSVQHPESSASDTTSVSPALSSLGNSAHGSSAEDYAHHGWGHNSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGFSHDALLDSPASSCATLVAGSSPGPGERPFSPGGGSMSGRFSPAAXXXXXXXXXXXXXXXXXGVVLQQPPSFAFRPTGAAGAPSGGGXXXXXXXXXXXXXXXXXXXXRPKERLSITSSVASTDIESLDTSHLLEFDDDDDDETVPYGGPGYAAPAGDLGCVPPAAGSVGSXXXXXXXXXXXXNRVSPEDLQELEEALLMDNFSGVMDGILEGEVIPSAVPKMEALENMNFSGLFNSGAQPLTRGGGHVVNSGPSIGAGVPRGTPRSAGAAGSPRVQMFGGRSGASPNHAAGSASP---------------------------------SNSPRVGSSPRPPTPGXPGTHATAPGGXXXXXXXXX----RRRGDEAFPVEHYA-PSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAGAGGSAGFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGWGSGPRHSGVGESGFDPCATASSGPSAAXXXXXXXXXXXXXXXXXXXXXMSAGFQASATAASSSGQSWSVRLGDGTKQHGVTTAPKPAHRQNGWVLSSGEGQ 777
            MSKLSDALKTITKRKRVKGKP  DLIATVQRDGSLPACVQASNGTAPQPPS R+TAIK VAKTGA A  XXXXXXXXXXXXXXXXXXXXX   CGGASRRQIRPPAIVDAIATSNEEYAA IEHAYGSVQHPESSASDTTSVSPALSSLGNSAHGSSAEDYAHHGWGHNSST                                             EGFSHDALLDSPASS ATLVAGSSPGPGER  SPGGGS+SGR+SPAA                  VVLQQ P FA RPTG AG PSGGG XXXXXXXXXXXXXXXXXXXRPKERLSITSSVASTDIESLDTSH L+FDDDDDDE VPYGGPGYAAPAGDLGCVP AAG VGS XXXXXXXX   NRVSPEDLQELEEALLMDNFSGV+DGI EGE IPSAVPKME LE +NFSGLFNSGAQPLTR GGH  NSGP IGAGVPRGTPRSAGA GSPRVQMFGGRSGASPNHAAGSA+                                  +NSPRVGSSPRPPT GX GTHATAPGGXXXXXXXXX    RRRGDEAFP EHYA PSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAGAGGS GFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGW SGPRH GV ESGFD CATA SGPS  XXXXXXXXXXX          MSAGFQASATAASSSGQSWS+RLGDGTKQ+GVTTAPKPAHR NGWVLSSGE Q
Sbjct:  151 MSKLSDALKTITKRKRVKGKPFGDLIATVQRDGSLPACVQASNGTAPQPPSVRATAIKLVAKTGAAAXXXXXXXXXXXXXXXXXXXXXXXXXGCGGASRRQIRPPAIVDAIATSNEEYAAIIEHAYGSVQHPESSASDTTSVSPALSSLGNSAHGSSAEDYAHHGWGHNSSTSSTTYGARAKG----------------------------------EGFSHDALLDSPASSDATLVAGSSPGPGERALSPGGGSLSGRYSPAAAAAVTS------------VVLQQSPPFALRPTGLAGTPSGGGAXXXXXXXXXXXXXXXXXXXRPKERLSITSSVASTDIESLDTSHFLDFDDDDDDEAVPYGGPGYAAPAGDLGCVPSAAGGVGSGXXXXXXXXGAGNRVSPEDLQELEEALLMDNFSGVIDGIQEGEEIPSAVPKMEGLERVNFSGLFNSGAQPLTRAGGHAANSGPGIGAGVPRGTPRSAGATGSPRVQMFGGRSGASPNHAAGSATAGXRRRWRPASAGAPWNGPAAEQPGPPAPLHARQNNSPRVGSSPRPPTXGXXGTHATAPGGXXXXXXXXXSLSGRRRGDEAFPAEHYALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAGAGGSTGFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGWASGPRHGGVAESGFDRCATAPSGPSXXXXXXXXXXXXXA---------MSAGFQASATAASSSGQSWSMRLGDGTKQNGVTTAPKPAHRHNGWVLSSGEVQ 913          
BLAST of mRNA_Ecto-sp13_S_contig7887.19162.1 vs. uniprot
Match: D8LTZ5_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ5_ECTSI)

HSP 1 Score: 786 bits (2030), Expect = 9.780e-271
Identity = 525/779 (67.39%), Postives = 537/779 (68.93%), Query Frame = 0
Query:    1 MSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQASNGTAPQPPSARSTAIKPVAKTGADAAAXXXXXXXXXXXXXXXXXXXXXCGGASRRQIRPPAIVDAIATSNEEYAANIEHAYGSVQHPESSASDTTSVSPALSSLGNSAHGSSAEDYAHHGWGHNSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGFSHDALLDSPASSCATLVAGSSPGPGERPFSPGGGSMSGRFSPAAXXXXXXXXXXXXXXXXX-GVVLQQPPSFAFRPTGAAGAPSGGGXXXXXXXXXXXXXXXXXXXXRPKERLSITSSVASTDIESLDTSHLLEFDDDDDDETVPYGGPGYAAPAGDLGCVPPAAGSVGSXXXXXXXXXXXXNRVSPEDLQELEEALLMDNFSGVMDGILEGEVIPSAVPKMEALENMNFSGLFNSGAQPLTRGGGHVVNSGPSIGAGVPRGTPRSAGAAGSPRVQMFGGRSGASPNHAAGSASPSNSPRVGSSPRPPTPGXPGTHATAPGGXXXXXXXXXRRRGDEAFPVEHYA-PSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAGAGGSAGFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGWGSGPRHSGVGESGFDPCATASSGPSAAXXXXXXXXXXXXXXXXXXXXXMSAGFQASATAASSSGQSWSVRLGDGTKQHGVTTAPKPAHRQNGWVLSSGEGQ 777
            MSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQ S           S +++                                   ASR + R                AN                                                                                                EGFSHDALLDSPASSCATLVAGSSPGPGE PFSPGGGS+SGR+SPAA                  GVVLQQPPSFAFRP+GAAG PSGG XXXXXXXXXXXXXXXXXXXXRPKERLSITSSVASTDIESLDTSHLLEFDDDDDDE VPYGGPGYAAPAGDLGCVP AAG VGS   XXXXXX   NRVSPEDLQELEEALLMDNFSG+MDGILEGE IPS VPKME LENMNFSGLFNSGAQPLTR GGH  NSGP IGAGVPRGTPRSAGAAGSPRVQMFGGRS  SPNHAAGSASP  + R G SP P TPG PGT ATAPGG  X      RRRGDEAFP E YA PSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGF PQSPLSGGGAAAGA GSAGFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGWGSG RH GVGESGFDPCATA SGPSAA  XXXXXXXX           MSAGFQASATAASSSGQ+WSVRLGDGTKQ+GV TAPKPA RQ+GWVLSSGE Q
Sbjct:  151 MSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQGSTPV--------SASVE-----------------------------------ASRARAR----------------AN-----------------------------------------------------------------------------------------------GEGFSHDALLDSPASSCATLVAGSSPGPGEGPFSPGGGSLSGRYSPAAAGGGSGVNGTAAAATRATGVVLQQPPSFAFRPSGAAGTPSGGXXXXXXXXXXXXXXXXXXXXXRPKERLSITSSVASTDIESLDTSHLLEFDDDDDDEAVPYGGPGYAAPAGDLGCVPSAAGGVGSGPGXXXXXXGAGNRVSPEDLQELEEALLMDNFSGLMDGILEGEEIPSGVPKMEGLENMNFSGLFNSGAQPLTRTGGHAANSGPGIGAGVPRGTPRSAGAAGSPRVQMFGGRSVPSPNHAAGSASPVGT-RKGYSPPPQTPGTPGTQATAPGGGSXSGSG--RRRGDEAFPAEQYALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFLPQSPLSGGGAAAGANGSAGFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGWGSGHRHGGVGESGFDPCATAPSGPSAAAVXXXXXXXXGA---------MSAGFQASATAASSSGQNWSVRLGDGTKQNGVATAPKPAPRQHGWVLSSGEVQ 763          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7887.19162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JS66_9PHAE0.000e+078.97RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LTZ5_ECTSI9.780e-27167.39Putative NIN-like transcription factor n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7887contigEcto-sp13_S_contig7887:1909..4629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7887.19162.1mRNA_Ecto-sp13_S_contig7887.19162.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7887 1756..5510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7887.19162.1 ID=prot_Ecto-sp13_S_contig7887.19162.1|Name=mRNA_Ecto-sp13_S_contig7887.19162.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=854bp
MSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQASNGTAPQPP
SARSTAIKPVAKTGADAAAGAAASGSSSSSSSTSTRSSGGCGGASRRQIR
PPAIVDAIATSNEEYAANIEHAYGSVQHPESSASDTTSVSPALSSLGNSA
HGSSAEDYAHHGWGHNSSTSVSQQHHHQQQQQQQHQHQYGARSQGSTPVS
ASAKASRAQARAKGEGFSHDALLDSPASSCATLVAGSSPGPGERPFSPGG
GSMSGRFSPAAAAGGGSGVNGTAAAAATGVVLQQPPSFAFRPTGAAGAPS
GGGAGYPHGMGQRQPSPAGGHRPRPKERLSITSSVASTDIESLDTSHLLE
FDDDDDDETVPYGGPGYAAPAGDLGCVPPAAGSVGSGSGAAGAAGGAGNR
VSPEDLQELEEALLMDNFSGVMDGILEGEVIPSAVPKMEALENMNFSGLF
NSGAQPLTRGGGHVVNSGPSIGAGVPRGTPRSAGAAGSPRVQMFGGRSGA
SPNHAAGSASPSNSPRVGSSPRPPTPGTPGTHATAPGGGGGSGSGSGRRR
GDEAFPVEHYAPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAG
LSPHVGFPPQSPLSGGGAAAGAGGSAGFNVTCSPLGGSDRTYFPAPAASA
KAAALADPSSGRGHRRSSSSGLSSGWGSGPRHSGVGESGFDPCATASSGP
SAAAAAAAAAVAAAAAGAAGSSAAMSAGFQASATAASSSGQSWSVRLGDG
TKQHGVTTAPKPAHRQNGWVLSSGEGQHSSSSSSSRERSRGVVRPRSPQM
GRRSSVCLGSSRHHRGQRVTASCDVGTVPPYPLYRPFRWRPAPASLPERI
SWA*
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