mRNA_Ecto-sp13_S_contig1229.1916.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1229.1916.1
Unique NamemRNA_Ecto-sp13_S_contig1229.1916.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: A0A6H5KZ38_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ38_9PHAE)

HSP 1 Score: 734 bits (1894), Expect = 4.360e-253
Identity = 373/381 (97.90%), Postives = 377/381 (98.95%), Query Frame = 3 
Query:   90 VRAMRGRKGSLWGKKKKEASGKAERVPGGSAPRAAARGAVKALDAIDFSQFYDKVNSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMKKDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTSVTL 1232
            +RAMRGRKGSLWGKKKK+ASGKAE VP GSAPRAAARGA KALDAID+SQFYDK NSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERS+YRLLPANEYAYLMKKDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTSVTL
Sbjct:    1 MRAMRGRKGSLWGKKKKQASGKAEHVPVGSAPRAAARGAAKALDAIDYSQFYDKANSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSEYRLLPANEYAYLMKKDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTSVTL 381
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: D8LTJ7_ECTSI (Myosin IA heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ7_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 1.840e-190
Identity = 274/280 (97.86%), Postives = 276/280 (98.57%), Query Frame = 3 
Query:   99 MRGRKGSLWGKKKK-EASGKAERVPGGSAPRAAARGAVKALDAIDFSQFYDKVNSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPA 935
            MRGRKGSLWGKKKK +ASGKA RVPGGS PRAAARGA KALDAID+SQFYDKVNSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPA
Sbjct:    1 MRGRKGSLWGKKKKKQASGKAGRVPGGSPPRAAARGAAKALDAIDYSQFYDKVNSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPA 280
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: A0A835YR46_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR46_9STRA)

HSP 1 Score: 310 bits (793), Expect = 8.480e-92
Identity = 172/334 (51.50%), Postives = 221/334 (66.17%), Query Frame = 3 
Query:  231 FSQFYDKVNSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMKKDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTSVTL 1232
            +++ Y KVN RG  DDLVLL+ VSNE I E+L TR  + DMYTSIG                     +GV  +Y  +G     APHI+R+ A+A ++L A+  +Q +IVTGESGAGKTEAAKQLM FVT VGT+++ Q+  ME V+R LLESNP+LEAFGNAQTIRNDNSSRFGK MELQF++KG ++GG+VT+YLLEKSRVT Q+PGER FHV HYL+  +S  ER +Y +LPA +Y  L  ++R + G++D   F  LK SMS + I   +Q  +F LL+ VLA GN+ F+D GD   A +       L + A  L V    L+ ALTS TL
Sbjct:   13 WTELYAKVNKRGVCDDLVLLDTVSNESICELLETRLRRQDMYTSIG---------------------NGVAKHYFAQGS-THTAPHIFRIGADALRALAANRENQAIIVTGESGAGKTEAAKQLMQFVTVVGTTTDAQRERMETVKRQLLESNPVLEAFGNAQTIRNDNSSRFGKLMELQFSYKGAIQGGRVTSYLLEKSRVTAQSPGERNFHVFHYLV-ASSREEREEYGVLPAAQYQSLSCQERKVPGVNDATRFAELKRSMSAIGISADEQRQVFTLLSAVLALGNVYFKDKGDAVRAGIADAA--VLNKAARLLQVPAEDLQTALTSATL 321
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: F0YAR1_AURAN (Myosin motor domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAR1_AURAN)

HSP 1 Score: 282 bits (722), Expect = 9.650e-85
Identity = 164/326 (50.31%), Postives = 210/326 (64.42%), Query Frame = 3 
Query:  270 VDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANE-YAYLMKKDRSIRGIDDGKEFINLKAS----MSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTSVTL 1232
            + DLVLL+ +S++GI   L  R  +G+MYT IGPVLIAVNPYK L   G  IY  GV  +Y+ K   + + PH+Y VAAEA K +++  ++QCV+V+GESGAGKTE AKQLM FV  +        AT+E  ++ LL+SNP+LEAFGNAQT+RNDNSSRFGKYMEL F FKG + GG V+NYLLEKSR+ G   GER FH+ H L  G  A+ R     L A   YA+LM +D+ +  +DD KEF   KA+    ++ +    +D+  +  L+A VLA G + FEDHGD  AAT    P K L R A   G+   AL  ALTS TL
Sbjct:   22 ISDLVLLDEISSKGITSELSARYRRGEMYTCIGPVLIAVNPYKLLEKQGS-IYRDGVARFYYDKTPLE-VTPHVYSVAAEALKGMRSKRQNQCVLVSGESGAGKTETAKQLMQFVAIISGGG----ATLEATKQQLLDSNPVLEAFGNAQTVRNDNSSRFGKYMELSFDFKGDVEGGTVSNYLLEKSRIVGHGAGERGFHIFHMLTLGADAKLREALSGLGAPPAYAFLMNEDKRVPKVDDAKEFELWKAATTSVLAGIGYDAEDEREVLSLVAFVLALGELEFEDHGDDRAATAKD-PSK-LERAATLAGLTGGALGTALTSRTL 339
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: F0Y138_AURAN (Myosin motor domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y138_AURAN)

HSP 1 Score: 280 bits (716), Expect = 1.970e-81
Identity = 161/321 (50.16%), Postives = 205/321 (63.86%), Query Frame = 3 
Query:  273 DDLVLLEN--VSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAY--LMKKDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTS 1223
            DDL+LLE   +++ G+ + L  R ++ +MYT+IG VLIAVNPY+ L  GGK IY   V  +Y ++       PHI+ V A AY +L  D  DQCV+VTGESGAGKTEAAKQLM+FVT        +K +   V+  LL SNP+LEA GNA+T+RNDNSSRFGKYMELQF F+G + GGK++NYLLEKSRV  QA GER FH++H LL G S  ER+ YRLL     AY  +M++ R+  G+DD   F  LK S+  V +   D +  F +L  V+  GN+ FED G  +A   +   D  LA  A  L VD A L  ALTS
Sbjct:    3 DDLILLEEAQLTHGGLSKELSARYKRDEMYTAIGEVLIAVNPYRVLERGGKSIYGEDVALHY-QEAILHLQKPHIFGVGAAAYNALVRDGEDQCVLVTGESGAGKTEAAKQLMNFVTVAA-----KKHSAADVKDKLLMSNPVLEALGNAKTVRNDNSSRFGKYMELQFDFRGAVAGGKISNYLLEKSRVAAQADGERNFHIVHQLLAGASKAERATYRLLEGGPAAYACVMREARTASGVDDAAAFDELKTSVDGVGVAFNDAAQFFKVLGAVVNLGNVAFEDRG-ADAPAGIAADDAGLAAAAALLDVDGALLATALTS 316
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: F0ZZR8_DICPU (Myosin IA heavy chain n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZZR8_DICPU)

HSP 1 Score: 272 bits (695), Expect = 5.040e-79
Identity = 151/320 (47.19%), Postives = 215/320 (67.19%), Query Frame = 3 
Query:  270 VDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDF-MAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMK-KDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTS 1223
            VDDL++L  VS + ++E L+ R ++G +YTSIGPVLI++NPYKQL     GIY     + Y  KG  +F + PHI++VA +AY++L+++  +QC+I++GESGAGKTEA+K +M ++ ++  SS+     +E V++ +LESNP+LEAFGNA+T+RN+NSSRFGKYME+QF   G   GGK+TNYLLEKSRV  Q  GER FH+ + LL+G+SA E+  + LLP  +Y+YL K +  S  GIDD   F   K +M  V I  K Q  +F  L+ +L  GN+ F   G G+    + +  K  A  +  LGV+P+ LE+AL S
Sbjct:   13 VDDLIMLSEVSEKALLENLKDRYKEGLIYTSIGPVLISMNPYKQL-----GIYGQDNINLY--KGKHEFEIPPHIFKVADKAYRALKSEGENQCIIISGESGAGKTEASKYIMQYIASITGSSD----EVERVKKTILESNPLLEAFGNAKTLRNNNSSRFGKYMEIQFNLAGDPEGGKITNYLLEKSRVINQTMGERNFHIFYQLLKGSSAEEKQSFCLLPPEQYSYLNKGRCYSADGIDDELSFKQTKNAMKVVGIDEKTQREIFSTLSAILLLGNVTFNAQGTGS----VVSDKKLTASISNLLGVEPSLLESALVS 317
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: A0A8J4UZ80_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZ80_9MYCE)

HSP 1 Score: 263 bits (671), Expect = 1.330e-75
Identity = 155/321 (48.29%), Postives = 208/321 (64.80%), Query Frame = 3 
Query:  270 VDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDF-MAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMK-KDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAG-CLGVDPAALEAALTS 1223
            VDDLV+L  VS + +++ L  R + G +YTSIGPVLI++NPYKQL     GIY     + Y  KG  +F + PHIY +A +AY+SL ++  +QC+I++GESGAGKTEA+K +M ++ ++ T S T+   +E V++ +LESNP+LEAFGNA+T+RN+NSSRFGKYME+QF   G   GGK+TNYLLEKSRV  Q  GER FH+ + LL G SA E+S   LL    Y YL K K  +  GIDD   F   + +M  V I    Q  +F LL+ +L  GN+ F   G GN +    + DK +A T G  +GVDP  LE +L S
Sbjct:   10 VDDLVMLTEVSEKSLLDNLNQRYKDGVIYTSIGPVLISLNPYKQL-----GIYGKDQINLY--KGKHEFEIPPHIYSIADKAYRSLLSERENQCIIISGESGAGKTEASKYIMQYIASI-TGSSTE---VERVKKQILESNPLLEAFGNAKTLRNNNSSRFGKYMEIQFNLGGDPEGGKITNYLLEKSRVINQTVGERNFHIFYQLLRGASAEEKSKLHLLSPESYVYLNKGKCYTADGIDDNVAFKQTRHAMKIVGIDEPLQEQIFRLLSAILLLGNLNFTATGTGNNSNATIS-DKNIANTIGELMGVDPILLEQSLIS 318
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: D3BGI5_POLPP (Myosin IA heavy chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BGI5_POLPP)

HSP 1 Score: 262 bits (670), Expect = 2.310e-75
Identity = 150/326 (46.01%), Postives = 207/326 (63.50%), Query Frame = 3 
Query:  252 VNSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDF-MAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMK-KDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALARTAGCLGVDPAALEAALTS 1223
            VN+   VDDLV+L  VS   +   L+ R ++G +YTSIGPVLI+ NPYKQL     GIY     D Y  KG  +F + PHIY VA +AY++L+++  +QC+I++GESGAGKTEA+K +M ++ ++  SS+     +E V+  +LESNP+LEAFGNA+T+RN+NSSRFGKYME+QF + G   GGK+TNYLLEKSRV  Q  GER FH+ + LL G+S  ER  Y+LLP  +Y YL K +  +  GIDD   F   + +M  V I+  +Q  +F LL+ ++  GNI F     G          + ++  A  +GV+   LE AL S
Sbjct:   28 VNNSVGVDDLVMLTEVSENSLNGNLQKRYKEGLIYTSIGPVLISCNPYKQL-----GIYGKEYIDLY--KGKHEFEIPPHIYSVADKAYRALKSEHENQCIIISGESGAGKTEASKYIMQYIASITGSSQ----DVERVKNQILESNPLLEAFGNAKTLRNNNSSRFGKYMEIQFNYIGDPEGGKITNYLLEKSRVVKQTTGERNFHIFYQLLSGSSPEERELYKLLPIEQYNYLNKSRAYTADGIDDVAGFKATRKAMKVVGINEDEQKQIFKLLSAIMLIGNISFNPDNSGKTPGSTAADRQLISTIAALMGVENDLLEQALIS 342
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: A0A152A2Q9_9MYCE (Myosin IA heavy chain n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2Q9_9MYCE)

HSP 1 Score: 261 bits (666), Expect = 8.200e-75
Identity = 146/321 (45.48%), Postives = 211/321 (65.73%), Query Frame = 3 
Query:  270 VDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDF-MAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMK-KDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGD-GNAATVMQTPDKALARTAGCLGVDPAALEAALTS 1223
            V+DLV+L  V+   +++ L+ R ++G +YTSIGPVLI++NPYKQL     GIY +   D Y  +G  +F + PH++++A +AY++L+A+  +QC+I++GESGAGKTE +K +M ++  +  SS    A +E V++ +LESNP+LEAFGNA+T+RN+NSSRFGKYME+QF + G   GGK+TNYLLEKSRV  Q  GER FH+ + LL G+SA E+ DY L  A  YAYL K K  +  G+DD   F   K +M  V I  ++Q  +F LL+ +L  GN+ F       N+A+ + +  K  A  A  +GV    LE ++ S
Sbjct:   18 VEDLVMLSEVNENSLIQNLQQRYKEGLIYTSIGPVLISINPYKQL-----GIYGNDSIDLY--RGKHEFEIPPHVFKIADKAYRALKAERENQCIIISGESGAGKTETSKYIMQYIANITGSS----AEVERVKKLILESNPLLEAFGNAKTLRNNNSSRFGKYMEIQFNYAGDPEGGKITNYLLEKSRVINQTVGERNFHIFYQLLSGSSAEEKRDYHLQTAENYAYLNKSKCYTADGVDDVLAFKQTKNAMKVVGITEEEQKEIFRLLSAILLLGNLTFTAGSTVKNSASCVISDKKLSATIASLIGVQAELLEQSMIS 327
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Match: MYOA_DICDI (Myosin IA heavy chain n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=MYOA_DICDI)

HSP 1 Score: 258 bits (659), Expect = 7.390e-74
Identity = 148/324 (45.68%), Postives = 210/324 (64.81%), Query Frame = 3 
Query:  270 VDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDF-MAPHIYRVAAEAYKSLQADSRDQCVIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPILEAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMKKDRS----IRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDKALART-AGCLGVDPAALEAALTS 1223
            V+DL++L  VS   + E L+ R ++G +YTSIGPVL+++NPYKQL     GIY +   + Y  KG  +F + PHIY +A +AY++L+++  +QC+I++GESGAGKTEA+K +M ++ ++ T S T+   +E V++ +LESNP+LEAFGNA+T+RN+NSSRFGKYME+QF   G   GGK+TNYLLEKSRV  Q  GER FH+ + LL+G+S  E+  Y LL  ++Y YL +   +      GIDD   F   K +M  V I    Q  +F  L+ +L  GN+ F     GN + +    DK LA T A  +GVD   LE++L S
Sbjct:   14 VEDLIMLTEVSESSLHENLKIRYKEGLIYTSIGPVLVSMNPYKQL-----GIYGNDQINLY--KGKHEFEIPPHIYSIADKAYRALRSEGENQCIIISGESGAGKTEASKYIMQYIASI-TGSSTE---VERVKKTILESNPLLEAFGNAKTLRNNNSSRFGKYMEIQFNLGGDPEGGKITNYLLEKSRVINQTQGERNFHIFYQLLKGSSEEEKKTYNLLSPDQYHYLTRNASNGCFTADGIDDQIGFKQTKNAMKVVGIDEPLQKEIFATLSAILLLGNLSFNKSASGNGSVIS---DKKLANTIASLMGVDAIVLESSLVS 323
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1229.1916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ38_9PHAE4.360e-25397.90Myosin motor domain-containing protein n=1 Tax=Ect... [more]
D8LTJ7_ECTSI1.840e-19097.86Myosin IA heavy chain n=1 Tax=Ectocarpus siliculos... [more]
A0A835YR46_9STRA8.480e-9251.50P-loop containing nucleoside triphosphate hydrolas... [more]
F0YAR1_AURAN9.650e-8550.31Myosin motor domain-containing protein (Fragment) ... [more]
F0Y138_AURAN1.970e-8150.16Myosin motor domain-containing protein n=1 Tax=Aur... [more]
F0ZZR8_DICPU5.040e-7947.19Myosin IA heavy chain n=1 Tax=Dictyostelium purpur... [more]
A0A8J4UZ80_9MYCE1.330e-7548.29Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
D3BGI5_POLPP2.310e-7546.01Myosin IA heavy chain n=1 Tax=Polysphondylium pall... [more]
A0A152A2Q9_9MYCE8.200e-7545.48Myosin IA heavy chain n=1 Tax=Tieghemostelium lact... [more]
MYOA_DICDI7.390e-7445.68Myosin IA heavy chain n=1 Tax=Dictyostelium discoi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1229contigEcto-sp13_S_contig1229:11225..18338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score537.0
Seed ortholog evalue7.3e-150
Seed eggNOG ortholog2880.D8LTJ7
Preferred nameMYO1D
Model size1233
KEGG koko:K10356
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000041,GO:0000146,GO:0000166,GO:0001726,GO:0001891,GO:0002009,GO:0002165,GO:0002250,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003008,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005546,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005730,GO:0005737,GO:0005768,GO:0005769,GO:0005783,GO:0005790,GO:0005829,GO:0005856,GO:0005884,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0005938,GO:0006605,GO:0006612,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006886,GO:0006887,GO:0006892,GO:0006897,GO:0006909,GO:0006911,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007498,GO:0007548,GO:0007552,GO:0007560,GO:0007600,GO:0007605,GO:0008022,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008154,GO:0008289,GO:0009267,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009791,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009892,GO:0009893,GO:0009925,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010324,GO:0010468,GO:0010563,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010921,GO:0010923,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015682,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016323,GO:0016324,GO:0016328,GO:0016459,GO:0016461,GO:0016462,GO:0016477,GO:0016482,GO:0016604,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017076,GO:0017111,GO:0017160,GO:0019220,GO:0019222,GO:0019899,GO:0019904,GO:0022414,GO:0022607,GO:0022610,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030011,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030033,GO:0030034,GO:0030036,GO:0030041,GO:0030046,GO:0030048,GO:0030050,GO:0030054,GO:0030139,GO:0030175,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030539,GO:0030554,GO:0030587,GO:0030659,GO:0030673,GO:0030705,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030898,GO:0030900,GO:0031090,GO:0031143,GO:0031152,GO:0031252,GO:0031253,GO:0031256,GO:0031260,GO:0031267,GO:0031272,GO:0031273,GO:0031275,GO:0031276,GO:0031323,GO:0031324,GO:0031334,GO:0031344,GO:0031345,GO:0031410,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031941,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032009,GO:0032271,GO:0032273,GO:0032386,GO:0032388,GO:0032420,GO:0032421,GO:0032501,GO:0032502,GO:0032528,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032587,GO:0032589,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033267,GO:0033554,GO:0033572,GO:0034097,GO:0034341,GO:0034613,GO:0034622,GO:0035091,GO:0035112,GO:0035126,GO:0035215,GO:0035239,GO:0035295,GO:0035303,GO:0035305,GO:0035639,GO:0035924,GO:0036094,GO:0036477,GO:0038084,GO:0038089,GO:0038093,GO:0038094,GO:0038096,GO:0040011,GO:0040012,GO:0040017,GO:0040029,GO:0042221,GO:0042330,GO:0042594,GO:0042623,GO:0042742,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043086,GO:0043167,GO:0043168,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043325,GO:0043327,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044291,GO:0044297,GO:0044304,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044853,GO:0044877,GO:0045056,GO:0045087,GO:0045121,GO:0045160,GO:0045177,GO:0045178,GO:0045184,GO:0045335,GO:0045815,GO:0045936,GO:0046661,GO:0046903,GO:0046907,GO:0048193,GO:0048306,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048565,GO:0048569,GO:0048583,GO:0048584,GO:0048608,GO:0048707,GO:0048729,GO:0048731,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048856,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050900,GO:0050954,GO:0051015,GO:0051017,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051129,GO:0051130,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051258,GO:0051270,GO:0051272,GO:0051336,GO:0051346,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055123,GO:0060171,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060491,GO:0060562,GO:0061024,GO:0061458,GO:0061502,GO:0061572,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070685,GO:0070686,GO:0070727,GO:0070848,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071363,GO:0071496,GO:0071702,GO:0071705,GO:0071840,GO:0071907,GO:0071944,GO:0071976,GO:0072512,GO:0072657,GO:0072676,GO:0072678,GO:0090066,GO:0090087,GO:0090150,GO:0090287,GO:0090313,GO:0090314,GO:0090316,GO:0090598,GO:0090702,GO:0097159,GO:0097367,GO:0097435,GO:0097440,GO:0097447,GO:0097458,GO:0097708,GO:0098542,GO:0098588,GO:0098589,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0098927,GO:0099024,GO:0099080,GO:0099081,GO:0099120,GO:0099512,GO:0099513,GO:0099515,GO:0099518,GO:0099568,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120033,GO:0120035,GO:0120036,GO:0120038,GO:0120117,GO:0150034,GO:1900076,GO:1900078,GO:1900746,GO:1900748,GO:1901265,GO:1901363,GO:1901888,GO:1901981,GO:1902547,GO:1902903,GO:1902905,GO:1902936,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:2000145,GO:2000147,GO:2000810
Exons7
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0164@2759
Ec32 ortholog descriptionMyosin head, motor domain
Ec32 orthologEc-02_005860.1
Cds size1134
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko03036,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1229.1916.1prot_Ecto-sp13_S_contig1229.1916.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1229 11225..18240 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462653.4531002-CDS-Ecto-sp13_S_contig1229:11224..114041681462653.4531002-CDS-Ecto-sp13_S_contig1229:11224..11404Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1229 11225..11404 -
1681462653.466628-CDS-Ecto-sp13_S_contig1229:11781..118961681462653.466628-CDS-Ecto-sp13_S_contig1229:11781..11896Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1229 11782..11896 -
1681462653.4825635-CDS-Ecto-sp13_S_contig1229:12328..124831681462653.4825635-CDS-Ecto-sp13_S_contig1229:12328..12483Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1229 12329..12483 -
1681462653.4995198-CDS-Ecto-sp13_S_contig1229:12988..131261681462653.4995198-CDS-Ecto-sp13_S_contig1229:12988..13126Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1229 12989..13126 -
1681462653.5090432-CDS-Ecto-sp13_S_contig1229:13605..137881681462653.5090432-CDS-Ecto-sp13_S_contig1229:13605..13788Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1229 13606..13788 -
1681462653.5191276-CDS-Ecto-sp13_S_contig1229:14316..144571681462653.5191276-CDS-Ecto-sp13_S_contig1229:14316..14457Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1229 14317..14457 -
1681462653.5353336-CDS-Ecto-sp13_S_contig1229:18018..182401681462653.5353336-CDS-Ecto-sp13_S_contig1229:18018..18240Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1229 18019..18240 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462653.5510526-UTR-Ecto-sp13_S_contig1229:18240..183381681462653.5510526-UTR-Ecto-sp13_S_contig1229:18240..18338Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1229 18241..18338 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1229.1916.1

>prot_Ecto-sp13_S_contig1229.1916.1 ID=prot_Ecto-sp13_S_contig1229.1916.1|Name=mRNA_Ecto-sp13_S_contig1229.1916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MRGRKGSLWGKKKKEASGKAERVPGGSAPRAAARGAVKALDAIDFSQFYD
KVNSRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYK
QLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQC
VIVTGESGAGKTEAAKQLMHFVTTVGTSSETQKATMEGVQRHLLESNPIL
EAFGNAQTIRNDNSSRFGKYMELQFTFKGMLRGGKVTNYLLEKSRVTGQA
PGERCFHVMHYLLEGTSARERSDYRLLPANEYAYLMKKDRSIRGIDDGKE
FINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQT
PDKALARTAGCLGVDPAALEAALTSVTL
back to top

mRNA from alignment at Ecto-sp13_S_contig1229:11225..18338-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1229.1916.1 ID=mRNA_Ecto-sp13_S_contig1229.1916.1|Name=mRNA_Ecto-sp13_S_contig1229.1916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7114bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1229:11225..18338- (Ectocarpus species13 EcNAP12_S_4_19m)
ACGAACGCAGTACGCCGTCCCTAATTTAGCAAGGAGAGGGACGTATTGTT
CTGATTTCATCCCTCCCTCTCGTCTCTCAGCCGAGCTGCGTGCGAGCCAT
GAGGGGGCGCAAGGGTTCGCTCTGGGGCAAGAAGAAGAAGGAGGCGTCCG
GGAAGGCGGAGCGTGTCCCCGGCGGCTCGGCTCCGCGCGCTGCTGCCCGC
GGCGCGGTAAAGGCTTTGGATGCCATCGACTTTTCGCAGTTCTACGACAA
AGTGAACTCGAGGGGAAGCGTGGATGACTTGGTGCTGCTCGAGAACGTTA
GCAATGAGGGCATTGTCGAGGTGAGAACCGAGGACCGGAGAGGCTTCTCG
GTGTCTCGGTGGTGATTTTCCCAGGCGTGTGCATCAAGGCTGCTTCGGAT
GTTCCGATTCATGGCTTGGCTCGGCGGCACACGGACATTTTTTTTATGCG
GCCCCTGCATGCATGTGTGTGTTTACCTAGCATGCGTCTGTCAAGGTTCG
CAGCTACTGCTGTAGTTCGGGGTCGCTGTCATTGTACTTCTGCTGCCTGT
TGCCCATGGCCAAGTTGGATGGCTTGTCTCGCGCGTGAACGCAACGCATG
GTCAAGAGAAACCGCACAATACGAACGAAATGTGTCAACCGATCTCCCCC
GCATTTTTTCTGTTTGCTGTTTATGACTGCGCCTCTCACACGAAACATCT
TAAATGTCTAGCTCGTGATTCGTGATTAGATGTGTCAGCATGAACCGCTT
GAAAACGCCGAGCTGTCCGCAATCAGCAATTACTACTCGTACTGCTGTGT
TCACTATTGTCCACTTGTGGTCGAGGGATGGGGCGGAGCATCAGTTGACA
GCTACTGCTGTTCCGGCATTCTTTTCCTCCCAGCGTGTGCTGTCCTCTGT
CCTCTGTCCTCTCACGGAAAAAAAAAAAAGCAGACCCGACCCGACCGCCG
GTTTCGAAATTCGAACCTCGTACCAACTCCGGTAGTTCAGTAAGATCAAC
ATCGTTACTCACAGAATGCTCCGTCTTGAGAAAGAAATCACAGCTACCCT
CCGACGGATTTAAATGCAGTACGTCCATACACGTGAGGGCCCAAGGTACG
CCAGCCACAGCGCTTGAGCGGCAACATCCATCTATCCACCACCCGTGTTT
CAAACTTCCTCGTGACATGAGTTTAAAATCTTCCGCGTTTCCTCAGAAAA
TATGGGAGCACAGGTAGTTTGTTAGGCCTGCTGCTGCTAAAAATCTTTCC
GTCCTGCTCTCTCTCCTGTCTTGACATGGAGCCACGGATTTCTTTCATGG
TGGCCGTGCTTCTCACCAAGACCACCCACGAAAAACACAAAGAGAGGAAG
AAAGGACATGTCAACCGAATTTCTGCTCATCACAAGGCGTAGAGCCCAGC
AGAGAGCACGTACGCTGTCATATACTGTGGTATATATTTCCGATGGATAA
TGCTGCGAGGCGAGCTCCATACGGAGTACGAGGTGTACTCCAGTAAGATA
GCGCGGCATGATTGCATGATTGCATGGCTGTCGACAGCAGACAAAGGTTG
ACTCGTGTGGAGTAGACGGAGGCATGCAGCATTCAGCGCTTTGCCACAGT
CTCAAAATTTTAGATGAATATGTACAGGCAGGGGGTAGGTCCTGAATATG
CCAAGGCTGCTTCCTGTAGTTTCGGAACGCCCATTACGAGGATGACGTAA
ACGCCATTGGTATGCAAACATATGAACGGTTTACATTGCAAAACAGCGCG
GGGGGATAAGAAGGGCCAATACAACGATGAAACAAAGTGAGCACTTATGC
TTTTGATATTGTGAATAGTAGCATGCATTTCTGAGCCGACTCTGGAGGGC
TCTCTCCGGAGGGATCACTTGATTACAAGTGCATATCTCGGAGCACACAA
GCAGCTGTGGCGTAGCTTGTACACTCGTTTTGATGAAGTCGGGAACGTTT
TGGTTGTCGTCACTAATAATACATGGCCGCAGCCATTGCAGATCAACCGA
ATCTTTTCAAAACATCAAACGCGTGAGGTTAAATCTGAGTTGCTGCCGCA
ACATCCTCGAGCTATCCCCAGGAGGTGATCGGTAGTATTTGCTGAACACG
ATTACCGAAGGAGCAATATTACAGATCGGGACAGATGTTCAAAAGGAAAA
GCACACACACCGGGGGCTGTAACTAGACGTCTTCGGGATGTAAGAAGAGT
GAAGAAAAAGGAAACAAGTAACAGCAGTTAGTCCTGGAAAAACCGCCTCG
CGGCCGCCTCCAAGTGGAACAACCCCAAGTCCCGCTATGACCCCTGGGCA
ACATGGCCAGGGCCCATGCACAGTATGAACATGAGCTTTTACGAACTTTC
TTGCAACTCTCTAGGCCCAACATCATCACGGCACACATGGCTGCAATAGT
AGTTGTTTGTCCTTTTCTTCCCCCGACATTCCAGTTGGTATATCCATCGA
ATACAAGTCAGTTTTTGTTTCACACCGACTTTGCATATTATCATTTCTTT
TTTTTCCTCGGCCCACTTTATGTCTGAAAAAAACCTACTTAGTAGACAGT
CCACTAGTCACTTTCGGGCCTCGGACGTCAACCTCCACGTAGCTGCACGA
CAGAACACGAACAGTAGTACCAAACCTCGGGACGTGTCTGGCACGTACAT
CTTTCTGCATCTTTTACAACCATAGACGGACATCGTAATTGTGTGATTGG
TTGATGGACGCGCAAACACACACTCCAACCCACCGGCGAGCAAGCAACCG
ATCGACCGAAATTCGGGTAAGGTGTCACTCACGCGCTCACAAACACGCGG
GAAGATACCCGGCAAGCTGCGCGGCACTACCACAAATATGGTGATATCAG
CGTTGGGCTGTACGAAAACGCCTCTGTCTTGACACACACCCTCTCTCTTT
CTCTTTGTCTCATCTCTCCACACGCACATGCCCTATTGTGGGAATCCAAC
AAATTCAGTCCAGTTTGCCGGTCGCCGCGACCGTTCGGCCGTTGTTCGCC
TAGTGGAAACGAGGTGTTTTCGTACGGCTCGACGCTGACGTTACAATACT
GTGGTGTGACGGTGAAGACAAGAGCTGACCTGACCCGTCAAAGGGGGAAG
GGGGACCCGAAAGTGCGCCTGACGTTATCCACATCCGCTAGAGTCTAAGG
GTGTCACGTATGGTGTGGTTATGTGAGGTGTCACATCTCCTCACTTTCAT
TGACGCAATTAAACGTATTCTTCGCATGAGAACACCCCCACCACTCCCCA
CACACTGTGATAATCCCATGAGCCCAATAATGACATGAAGTACCAGGGTC
ACTGCAAATATCACCTCCCCCCCGAGAGAGCAACACCTCCGCTCCTGATA
TTTTTTTAAACGCCGAAAACCTCATTCAACGCCATTTCGTTGTGCGGAAT
GCGGTGGGTAGGTTCAGCCTGAGACTTCAGGGCATTGTAGTTTGCGCCCA
CCCGACAAGTGAGTCAACACAACACACGTCCCGCGCCCACCGGCGAAGCT
GGCGGCATGTGTCGGCCATGCGGGTCCAAAATAACCACGCCTCCATTGGT
CGAGGGGTTCGTACACGGCCTGGAGTATCATACGCGAAACCATGGCAAGC
TTTCTCCTCCACACGATGCTTGAAAGAACCTCAATAGTCCTGCCTGCCTG
TGGTCCCTAAACCACGCACCATATACTGGAAAGAAAACACTCCAGGGGCA
GCATTCCCCGCCCTCACCAGAACGATTTCTCCACGTTGCATGTCCCCATA
AGCTTAAGCCACCCGGTCGCTCTTGCCACCGTTGTCCTTCTCCCTAAGCG
ACAACGCCCACAACTCCTGCTCCTCCTTCTGCTACTGTACCGTTGCTGCG
GATCTCGGGGCCACACGATGTCCGTCACCAGGTTCTCCGCACGAGGTGCG
AGAAGGGAGACATGTACACGTCGATCGGACCGGTGCTGATCGCCGTGAAT
CCCTACAAGCAGCTCAGCATGGGGGGCAAGGGCATCTACACGTCGGGCGT
CAGGGACTACTACCACCGAAAGGTACTCTATTGGATTGTGCCATCCAGCC
GTGCTTCGAAAATGCGTCCCACAATGGTAGCTTGAAACAGCTGTGCAACA
GTAGTGCGGCCGCAGCGTTTACTGCTGTGCCTGGTTTTGGTTGGGCAGGA
TGCCTCGTTAGGTGCGGCGGTTATTGTAACTCTGAACCACAGTCGTAAGC
TCTCGGCTCTGTCTTCGCTAGCTGACGGTCACACGTCCGGTTGCCTCTAT
TTGCTGCGACAGGGTGGTAGCCATTCGATGAAATCAAATCGATTCTTGAG
TGGACGTACCGACCGGTAGCGGGGAAGGCACCGACGCCGCCGCATTTGCA
CCCGACGAAACGGTGCACAAGCCTTCGGAGAAACCTTGCACCTCAAAACT
CTCGCGCTGCTTCGCTTTGCTGCTTGGTCTGCTTTACTCTGCTGCTCTGC
TTTGCTCTGCTTTGCTTTGCTCTACCTTGCCCTGCTTTGCTCTGCTTTAC
TCTGCTCGGCCGCTTTGCACTGATTTGCTCTGCTTGGCGTGCCTGTGCAG
GGGGGTGGCGACTTCATGGCCCCGCATATCTACCGCGTGGCGGCGGAAGC
ATACAAGAGCTTGCAAGCCGACTCGAGGGACCAGTGCGTTATCGTTACGG
GGGAGTCCGGTGCGGGTAAGACGGAAGCGGCTAAGCAGCTGATGCACTTC
GTTACCACCGTGGGGACCTCGAGCGAGACACAGGTGCGGTTAAGTCTTCG
ACACCGGACAAGCGACGTTCTCAAGGCTGACCAGCACTCCACCACTCCCT
GGCATGACACGAGTTAGTTGGACTTTCTAAGCGGTTTCTTCGCGTTTTTC
TGTCGACAGACGCGAAGAAGATATGTCAGAGACTTGTATCTGCGCCTGTC
GGATTTTCTTGCTCCTTAGGTTGGCTTTTTTCGCTTTATACTACACACTC
GTGACACTTGTTTTGTCATGCCTAAATGTACACAAAAGTCAAAGCCACCT
GCGCATGTCCATCTTTTTTCATGTACCGATCGCGATTCTCCACCAATTCG
CCTTGACTAATCAAAAACTATTTGATAAGACAACACACAAGAAGTTATCA
ACCCAAATTAACATCTTGGGAGCAGCCTGAGTCTACTGCTGTTTGCACCA
CACACGGGTTTCCTTACACTCTCGTGCACGTTTTGGTTCCACTTCATGGC
CGGCGGGAGCAGAAAGCCACGATGGAGGGCGTTCAGAGGCACCTGTTGGA
GTCCAACCCCATCCTCGAGGCTTTCGGCAACGCGCAGACCATCCGTAACG
ACAATTCGTCGCGCTTCGGGAAGTACATGGAGTTGCAGTTCACCTTCAAG
GTACGCTTTTTAGAGCTTGGCGTTTGACGGTCACGGTGTTGAGGCGGAGA
GGGTCAAGGTAGCGGTACCGTATCTCATAGAGGAGAGCAACACAGACGGC
CCGCGTGCCCGAAATACGCGGAAGGCGATATTAAGATGTGAAGCATCTGA
TAAGACGACAGATGTTTTCTCTCGGTTTCCCAAAACATGCAGAATATTGT
GATCGCCATGAACTTCTGTGATGGAGGCGTCACAGCTAGACGTCGGTGGT
TGGAAAAAGGAAGGGGGCTGGGTAAGCAAATCGTCACCCGTCGAACGAAC
ACACTCTGTAAGCGCCTCATGACCCTGAGAGGATCTACATGGTCTCCCCC
ACACCGCAGACCTTGTTGCACGACAGGCTGATCATTCGAACGACCTGGAC
AACGGCAAACCAGTGCGCTGGTTGCTGCTTCCACCCTGAAGAGACCACTC
ACGCTCTACCGAATGGCCCGTCTAATCGCAAACTGGCTGTTCTGTGTGGG
TGCAGGGTATGCTGAGGGGCGGCAAGGTGACCAACTACCTGCTGGAGAAG
AGCAGGGTGACGGGCCAGGCGCCGGGGGAGCGGTGCTTCCACGTGATGCA
CTACCTGCTCGAGGGAACGAGCGCACGCGAGCGGAGCGATTATCGCCTTC
TCCCCGCGAAGTAAGGAGGGAGAAGGAGTTGTTGCTGTTCGGCCGCTTTG
GCTGTTGATGTGTTTGGTATTTCGTGTTTTGTGTCAATGCCCGTGCGTAT
GTTTTGTCGCGTCGGTGCGGAAATGAGCGTGTTTGTCGTTTGCTCCCTGC
GATAGTTCTATCTGAACCTTGCTCTCCTGCAAGGATGCTCTAACAACACG
GGCATCGAGTGGGGTTGTGTGGTTGTCTGTTTCCTGTTTCCTTGGATGTG
TCGTTCCTTCTGTGTGGCGTATCCATCGTCGTCATCCATGGAGTTGTTGG
TATGTTATCATCTGAGTTTGTGATTTTCTACTGATGAAAAGGTCTTGACG
CAATCTGGCACGTAAGTCATAAATGAGTGCACACGAGAGTTGCTCATCTT
CGTGTCTCAACCCCCCCCCCCCCCCCCCGCGAGCGCTTACAGCGAGTACG
CCTACTTGATGAAAAAGGACCGGTCCATCCGGGGCATCGACGACGGCAAG
GAGTTCATCAACCTGAAGGCGTCCATGTCGCGCGTGGACATCCACCCGAA
GGACCAGGTGACGACCGATCGTTTTCACGTGCTGGCAGGCCGTCTCTCGC
AGTATGCATGTGCGGGAGCTGCCCTCTGAGTGAGCCTTCATGCGAGGCAG
ATTTTGTTTTGTTTTATCGTTCTGGTTACCGACGTGGCGGTTGTGATGCC
CCGTGGAGGCCAATGGGCCGGAGTTGGGTACCGAGGATCAGCATCACCGG
GCTAGGCATTTCTGTATTCTCATTCACAGCTTGTTTGCTAACCCTAACCC
TACACTGCAGGTGAAGGAGAGGCAGGCAAGCTCCAAGATGAGTATGATAC
ACCGCACCCTCCGCCCGTATCCACTGTTCCCAGTGAGCTTTCTCATTTTT
GTGTGTGTCCCGAATTCCACGCCCACATCGCCAGTCCCACCTGTTCCCCC
TGCTGGCCGGAGTCCTCGCGGCCGGGAACATTTGCTTCGAGGACCACGGG
GATGGTAACGCCGCCACGGTGATGCAAACCCCGGACAAGGCTCTCGCGAG
GACCGCGGGGTGCTTGGGGGTAGATCCTGCCGCTCTCGAAGCGGCCCTGA
CTTCGGTGACGCTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1229:11225..18338-

>mRNA_Ecto-sp13_S_contig1229.1916.1 ID=mRNA_Ecto-sp13_S_contig1229.1916.1|Name=mRNA_Ecto-sp13_S_contig1229.1916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1134bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1229:11225..18338- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGGGGCGCAAGGGTTCGCTCTGGGGCAAGAAGAAGAAGGAGGCGTC
CGGGAAGGCGGAGCGTGTCCCCGGCGGCTCGGCTCCGCGCGCTGCTGCCC
GCGGCGCGGTAAAGGCTTTGGATGCCATCGACTTTTCGCAGTTCTACGAC
AAAGTGAACTCGAGGGGAAGCGTGGATGACTTGGTGCTGCTCGAGAACGT
TAGCAATGAGGGCATTGTCGAGGTTCTCCGCACGAGGTGCGAGAAGGGAG
ACATGTACACGTCGATCGGACCGGTGCTGATCGCCGTGAATCCCTACAAG
CAGCTCAGCATGGGGGGCAAGGGCATCTACACGTCGGGCGTCAGGGACTA
CTACCACCGAAAGGGGGGTGGCGACTTCATGGCCCCGCATATCTACCGCG
TGGCGGCGGAAGCATACAAGAGCTTGCAAGCCGACTCGAGGGACCAGTGC
GTTATCGTTACGGGGGAGTCCGGTGCGGGTAAGACGGAAGCGGCTAAGCA
GCTGATGCACTTCGTTACCACCGTGGGGACCTCGAGCGAGACACAGAAAG
CCACGATGGAGGGCGTTCAGAGGCACCTGTTGGAGTCCAACCCCATCCTC
GAGGCTTTCGGCAACGCGCAGACCATCCGTAACGACAATTCGTCGCGCTT
CGGGAAGTACATGGAGTTGCAGTTCACCTTCAAGGGTATGCTGAGGGGCG
GCAAGGTGACCAACTACCTGCTGGAGAAGAGCAGGGTGACGGGCCAGGCG
CCGGGGGAGCGGTGCTTCCACGTGATGCACTACCTGCTCGAGGGAACGAG
CGCACGCGAGCGGAGCGATTATCGCCTTCTCCCCGCGAACGAGTACGCCT
ACTTGATGAAAAAGGACCGGTCCATCCGGGGCATCGACGACGGCAAGGAG
TTCATCAACCTGAAGGCGTCCATGTCGCGCGTGGACATCCACCCGAAGGA
CCAGTCCCACCTGTTCCCCCTGCTGGCCGGAGTCCTCGCGGCCGGGAACA
TTTGCTTCGAGGACCACGGGGATGGTAACGCCGCCACGGTGATGCAAACC
CCGGACAAGGCTCTCGCGAGGACCGCGGGGTGCTTGGGGGTAGATCCTGC
CGCTCTCGAAGCGGCCCTGACTTCGGTGACGCTG
back to top