prot_Ecto-sp13_S_contig7882.19157.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7882.19157.1
Unique Nameprot_Ecto-sp13_S_contig7882.19157.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length166
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7882.19157.1 vs. uniprot
Match: A0A6H5JKN3_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN3_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.690e-80
Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 0 
Query:    1 MGFFGMVLKPGHKEAVEVPPGWCLQLCTAALEPAKAGVKPRDVSATLWVQVEDSEICDNSYLLGSLQGGGPCAQIPVGHCLTSVDGEIIMEAKGGGTIHLTGFFSREYDPDAENDXXXXXXXXXXXXXXXX-GSNAELRSKLALLLADAEA 150
            MGFFGMVLKPG KEAVEVPPGWCLQLCTAALEPAKAGVKPR+VSATLWVQVEDSEI DNSYLLGSLQGGGPCAQIPVGHCLTSVDGE++MEAKGGGTIHLTGFF+REYDPDAENDXXXXXXXXXXXXXXXX GSNAELRSKLALLLADAEA
Sbjct:    1 MGFFGMVLKPGQKEAVEVPPGWCLQLCTAALEPAKAGVKPRNVSATLWVQVEDSEIGDNSYLLGSLQGGGPCAQIPVGHCLTSVDGEVVMEAKGGGTIHLTGFFNREYDPDAENDXXXXXXXXXXXXXXXXXGSNAELRSKLALLLADAEA 151
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BLAST of mRNA_Ecto-sp13_S_contig7882.19157.1 vs. uniprot
Match: D7FLP0_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLP0_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 4.360e-80
Identity = 142/150 (94.67%), Postives = 143/150 (95.33%), Query Frame = 0 
Query:    1 MGFFGMVLKPGHKEAVEVPPGWCLQLCTAALEPAKAGVKPRDVSATLWVQVEDSEICDNSYLLGSLQGGGPCAQIPVGHCLTSVDGEIIMEAKGGGTIHLTGFFSREYDPDAENDXXXXXXXXXXXXXXXXGSNAELRSKLALLLADAEA 150
            MGFFGMVLKPG KE VEVPPGWCLQLCTAALEPAKAGVKPRDVSATLWVQ EDSEI DNSYLLGSLQGGGPCAQIPVGHCLTSVDGEIIMEAKGGGTIHLTGFF+REYDPDAEND XXXXXXXXXXXXXXX  NAELRSKLALLLADAEA
Sbjct:    1 MGFFGMVLKPGQKETVEVPPGWCLQLCTAALEPAKAGVKPRDVSATLWVQAEDSEIGDNSYLLGSLQGGGPCAQIPVGHCLTSVDGEIIMEAKGGGTIHLTGFFNREYDPDAENDDXXXXXXXXXXXXXXXX-NAELRSKLALLLADAEA 149
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7882.19157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKN3_9PHAE1.690e-8095.36Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CC... [more]
D7FLP0_ECTSI4.360e-8094.67Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041232Nucleoplasmin-like domainPFAMPF17800NPLcoord: 3..104
e-value: 3.1E-8
score: 34.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7882contigEcto-sp13_S_contig7882:2437..6208 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7882.19157.1mRNA_Ecto-sp13_S_contig7882.19157.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7882 2437..6455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7882.19157.1 ID=prot_Ecto-sp13_S_contig7882.19157.1|Name=mRNA_Ecto-sp13_S_contig7882.19157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bp
MGFFGMVLKPGHKEAVEVPPGWCLQLCTAALEPAKAGVKPRDVSATLWVQ
VEDSEICDNSYLLGSLQGGGPCAQIPVGHCLTSVDGEIIMEAKGGGTIHL
TGFFSREYDPDAENDDDSSEEEESSEEGSEEGSNAELRSKLALLLADAEA
EDSDDDDDEEEEEEGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041232NPL