prot_Ecto-sp13_S_contig78802.19154.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78802.19154.1
Unique Nameprot_Ecto-sp13_S_contig78802.19154.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: D8LCF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCF0_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 6.720e-62
Identity = 104/106 (98.11%), Postives = 106/106 (100.00%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            +AGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEG+LGKAGIICVEDLI
Sbjct:   85 EAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGTLGKAGIICVEDLI 190          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A836CG85_9STRA (Ribosomal protein L30, ferredoxin-like fold domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG85_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.160e-51
Identity = 85/106 (80.19%), Postives = 98/106 (92.45%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            +A + +V+RIRGIIGV PKVRKILQLLRLRQINN+VFVKLNAAT+KMLRLVEPY+AYGYPNLKT+++L+YKRGFGKV K RIPISDNSVIEG LGK GI+ V+DLI
Sbjct:   77 EAKLAVVIRIRGIIGVGPKVRKILQLLRLRQINNTVFVKLNAATIKMLRLVEPYIAYGYPNLKTIKQLVYKRGFGKVRKSRIPISDNSVIEGVLGKYGIVGVDDLI 182          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A6V2QDA7_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QDA7_HETAK)

HSP 1 Score: 169 bits (429), Expect = 1.120e-50
Identity = 85/106 (80.19%), Postives = 98/106 (92.45%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            +A V  V+RIRGIIGVSPKVRKILQLLRLRQI+N VFVKLNAAT+KMLRLVEP++AYGYPNLK+V++L+YKRGFGKVN QRIP+S NSV+EG+LG  GIICVEDLI
Sbjct:   78 EAKVAFVIRIRGIIGVSPKVRKILQLLRLRQIHNGVFVKLNAATIKMLRLVEPFIAYGYPNLKSVKDLVYKRGFGKVNGQRIPLSCNSVVEGTLGDKGIICVEDLI 183          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A7S1G5B0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5B0_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.150e-49
Identity = 82/106 (77.36%), Postives = 96/106 (90.57%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            +  + +VVRIRGI+GVSPKVRKILQLLRLRQINN+VFV++N AT  ML +VEPY+A+GYPNLKTVREL+YKRGFGKVNKQRIP++DNSVIEG LGK  IICVEDL+
Sbjct:   78 EGKLALVVRIRGIMGVSPKVRKILQLLRLRQINNAVFVRINKATRNMLTIVEPYIAWGYPNLKTVRELVYKRGFGKVNKQRIPLTDNSVIEGVLGKKDIICVEDLV 183          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A7S2WW50_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW50_9STRA)

HSP 1 Score: 164 bits (416), Expect = 9.260e-49
Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0
Query:   12 VVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            VVRIRGIIGVSPKVRKILQLLRLRQI+N VFVKLN+AT+KMLRLVEPY+AYGYPNLK+ REL+ KRGFGKVNKQRI ISDNSVIE  LGK  IICVEDLI
Sbjct:  100 VVRIRGIIGVSPKVRKILQLLRLRQIHNGVFVKLNSATIKMLRLVEPYIAYGYPNLKSTRELVLKRGFGKVNKQRIAISDNSVIEQVLGKYDIICVEDLI 199          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A7S3V109_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V109_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.150e-48
Identity = 82/106 (77.36%), Postives = 96/106 (90.57%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            ++ +++  RIRGIIG+SPKVRKILQLLRLRQI+N+VF+K N AT+ MLRLVEP+VAYGYP+LKTVREL+YKRGFGKVNKQRIPI+DNSVIE  LGK  IICVEDLI
Sbjct:   77 ESKLIVATRIRGIIGISPKVRKILQLLRLRQIHNTVFLKANKATINMLRLVEPFVAYGYPSLKTVRELVYKRGFGKVNKQRIPIADNSVIEEVLGKKDIICVEDLI 182          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A5A8DMV8_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DMV8_CAFRO)

HSP 1 Score: 164 bits (415), Expect = 4.810e-48
Identity = 81/106 (76.42%), Postives = 99/106 (93.40%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            +A + +VVRIRGI+GVSPKVRKI+QLLRLRQINN+VFV+LN AT++ML++V PYVA+GYPN+KTVRE+IYKRGFGK+NKQRIP+SDNSV+E +LGK  IICVEDLI
Sbjct:  142 EAKLAVVVRIRGIMGVSPKVRKIMQLLRLRQINNAVFVRLNRATLQMLQMVVPYVAWGYPNVKTVREIIYKRGFGKINKQRIPLSDNSVVEEALGKHDIICVEDLI 247          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A7R9U1M8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M8_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.760e-47
Identity = 81/100 (81.00%), Postives = 92/100 (92.00%), Query Frame = 0
Query:   12 VVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            V+RIRGIIGVSPKVRKILQLLRLRQI+N VF++L  AT KML LVEPY+AYGYPNLK+VRELIYKRGFGKVN+QRIP+S+NSVI G+LGK GI C+EDLI
Sbjct:   81 VIRIRGIIGVSPKVRKILQLLRLRQIHNGVFLRLTGATRKMLTLVEPYIAYGYPNLKSVRELIYKRGFGKVNRQRIPLSENSVIAGTLGKYGIDCIEDLI 180          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: A0A6G0WJZ8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJZ8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.130e-47
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            +A V  VVRIRGIIGVSPKVRKIL+L RL QI N VFVKLN AT+ MLRLVEP+VAYGYPNLK+VRELIYKRGFGK+NKQRI ++DNS+IE  LGK GIIC+EDLI
Sbjct:  121 EAKVAFVVRIRGIIGVSPKVRKILKLFRLTQIQNGVFVKLNKATINMLRLVEPFVAYGYPNLKSVRELIYKRGFGKINKQRIALTDNSLIEKVLGKFGIICIEDLI 226          
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Match: B3SD15_TRIAD (Uncharacterized protein n=3 Tax=Placozoa TaxID=10226 RepID=B3SD15_TRIAD)

HSP 1 Score: 160 bits (404), Expect = 4.420e-47
Identity = 80/106 (75.47%), Postives = 97/106 (91.51%), Query Frame = 0
Query:    6 QAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLGKAGIICVEDLI 111
            +A +  VVRIRGI GVSPKVRKIL+LLRLRQI+N VFVKLN AT+ ML+LV+PY+A+GYPNLK+VRELIYKRGFGKV+K+RI +SDN++IE SLGK+GIIC+EDLI
Sbjct:   83 EAKLAFVVRIRGINGVSPKVRKILRLLRLRQIHNGVFVKLNKATINMLKLVDPYIAWGYPNLKSVRELIYKRGFGKVDKKRIALSDNAIIENSLGKSGIICMEDLI 188          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78802.19154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCF0_ECTSI6.720e-6298.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG85_9STRA2.160e-5180.19Ribosomal protein L30, ferredoxin-like fold domain... [more]
A0A6V2QDA7_HETAK1.120e-5080.19Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S1G5B0_9STRA4.150e-4977.36Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2WW50_9STRA9.260e-4986.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3V109_9STRA1.150e-4877.36Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A5A8DMV8_CAFRO4.810e-4876.42Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7R9U1M8_9STRA1.760e-4781.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6G0WJZ8_9STRA3.130e-4778.30Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
B3SD15_TRIAD4.420e-4775.47Uncharacterized protein n=3 Tax=Placozoa TaxID=102... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilyGENE3D3.30.1390.20coord: 9..111
e-value: 7.5E-13
score: 50.7
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilySUPERFAMILY55129Ribosomal protein L30p/L7ecoord: 10..111
IPR016082Ribosomal protein L30, ferredoxin-like fold domainPFAMPF00327Ribosomal_L30coord: 11..60
e-value: 2.7E-22
score: 78.4
IPR039699Ribosomal protein L7/L30PANTHERPTHR1152460S RIBOSOMAL PROTEIN L7coord: 6..111
NoneNo IPR availablePANTHERPTHR11524:SF1660S RIBOSOMAL PROTEIN L7coord: 6..111
IPR018038Ribosomal protein L30, conserved sitePROSITEPS00634RIBOSOMAL_L30coord: 28..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78802contigEcto-sp13_S_contig78802:21..625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78802.19154.1mRNA_Ecto-sp13_S_contig78802.19154.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78802 21..625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78802.19154.1 ID=prot_Ecto-sp13_S_contig78802.19154.1|Name=mRNA_Ecto-sp13_S_contig78802.19154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
FFFFFQAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATV
KMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGSLG
KAGIICVEDLI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036919L30_ferredoxin-like_sf
IPR016082Ribosomal_L30_ferredoxin-like
IPR039699Ribosomal_L7/L30
IPR018038Ribosomal_L30_CS