prot_Ecto-sp13_S_contig7874.19148.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7874.19148.1
Unique Nameprot_Ecto-sp13_S_contig7874.19148.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length496
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7874.19148.1 vs. uniprot
Match: A0A836CNI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.720e-26
Identity = 99/280 (35.36%), Postives = 126/280 (45.00%), Query Frame = 0 
Query:  187 LPAPQLLDGIVQICHGAAELLHTHFCCTQWHFSAFDDRLEDDAFLHTADILVANSXXXXXXXXXXXXXXXXXDGVSGQDRPSSSSQTVEGGEGGSTRASDPRIEALRRGLVRQRGALWEEIETKMILLLSEATVGGGALELEDLAGVVGAVGLLAALGDEFVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGKALRECLSGMAREFFQGANKEGVAVLKQMLEMEAWQRVPVPLKA----------DEGGVGGLIDTNAQRFCSPHRVYRGIRKPYV 456
            LP+  LL  +V  C G AELLH+H+   Q+  + FD+R EDD +LH   I    S      XXXXXXXXXXX                  G+     A +P +  LR  L RQRGALW  +E +++ LL  A V GG L+LED  G++GA  +LA LG+EF                                +   LR CL   + +FF+GA+ E   VL+QMLE E WQRVPV L A                         FC+    YRGI   Y 
Sbjct:  954 LPSAALLPALVGACRGCAELLHSHYLMLQYLRAPFDERAEDDEWLHRCAIGAPESLPASRQXXXXXXXXXXXXXXX---------XXXXXGDATDAAALEPHLHQLRERLWRQRGALWGAVEERVVALLDAACVDGGGLKLEDFVGLLGAAEMLACLGEEFAAGSDAA-------------------------SAARLRGCLQDKSEQFFRGAHAEAATVLRQMLEHEQWQRVPVMLDAAXXXXXXXXXXXXXXXXXXXXXXXXFCAAGGAYRGISHRYA 1199
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7874.19148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CNI9_9STRA2.720e-2635.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7874contigEcto-sp13_S_contig7874:2..5993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7874.19148.1mRNA_Ecto-sp13_S_contig7874.19148.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7874 2..5993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7874.19148.1 ID=prot_Ecto-sp13_S_contig7874.19148.1|Name=mRNA_Ecto-sp13_S_contig7874.19148.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=496bp
AIGATPAGGGEKPPERRRRQWISQGLANCALPLPRHLLIASNGTGGDVSD
GGSSVAVVADAGDGAVAADGVALSRHKLWDGGGGGGNSSNSTTVAEGGFP
TEGVGMSSVSAAGGGGEGVDAAVVVLDTRTGMEMLSDHVLACFLEEFNRL
LSDAIFEALVADQGLGAPERRRRGSRRAFEPPPPLFLPAPQLLDGIVQIC
HGAAELLHTHFCCTQWHFSAFDDRLEDDAFLHTADILVANSNSNSSSSNN
SGSGGGGGDGVSGQDRPSSSSQTVEGGEGGSTRASDPRIEALRRGLVRQR
GALWEEIETKMILLLSEATVGGGALELEDLAGVVGAVGLLAALGDEFVGG
GGSGGSSCSNSSGGASGTQEQQQQQQQQHAGKALRECLSGMAREFFQGAN
KEGVAVLKQMLEMEAWQRVPVPLKADEGGVGGLIDTNAQRFCSPHRVYRG
IRKPYVHLMHDVMALEEEPESFREQSPEGSCPSSSASKPTLDPSST
back to top