prot_Ecto-sp13_S_contig7873.19147.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7873.19147.1
Unique Nameprot_Ecto-sp13_S_contig7873.19147.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length427
Homology
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: D7FZA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA3_ECTSI)

HSP 1 Score: 586 bits (1510), Expect = 1.650e-199
Identity = 298/319 (93.42%), Postives = 306/319 (95.92%), Query Frame = 0
Query:  109 MFDRRPATLGRDVGRMVRSGQDMLSPEIVDLMVSSSTRSTVGSPPPLADTAGVDVFAVIAKAYHRLRRHDLTLQLCEAFEESTGEPLVPSTPQGLVWLLGAIRRRRTTAPHSGRQPGKRDREGEGERGVKEVLRLYEEGGKDVPVAAYTAAVEALAGCHCTVALEMAQEARSKLGNSAEGLGEVYAAVMKQCLEQQEPDVMRDVLEERIQAGGTMAPDARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKME 427
            MFDRRPATLGRDVGRMVRSGQD LSPEIVDLMVS+STRSTVGSPP LADTAGVDVFAVIAKAYHRLRRHDLTLQLCEAFEESTGEPLVPSTPQGLVWLLGA+RRR TTAP SGR+PG+ DREGEG R VKEVLR YEEGGKDVPV AY AAVEALAGCHCTVALEMAQEARSKLG+SAEGL EVY AVMKQC+EQQEPDVMRDVLEERIQAGGTMAPDARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDA+KFWRHANTIFEGM QRWGVAPNVYHYTSLVTCLLKAGQWSEAIA+TDKME
Sbjct:    1 MFDRRPATLGRDVGRMVRSGQDFLSPEIVDLMVSASTRSTVGSPPLLADTAGVDVFAVIAKAYHRLRRHDLTLQLCEAFEESTGEPLVPSTPQGLVWLLGAMRRRSTTAPRSGRRPGRHDREGEGGREVKEVLRRYEEGGKDVPVVAYKAAVEALAGCHCTVALEMAQEARSKLGDSAEGLCEVYVAVMKQCIEQQEPDVMRDVLEERIQAGGTMAPDARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDADKFWRHANTIFEGMAQRWGVAPNVYHYTSLVTCLLKAGQWSEAIALTDKME 319          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A6D2I7U4_9BRAS (DYW_deaminase domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I7U4_9BRAS)

HSP 1 Score: 67.0 bits (162), Expect = 3.280e-8
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 0
Query:  332 LALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKM 426
            + LG  GKA    EALELF EM+ESGV+PNA+A   +L+ C+     +   A + F+ M + +GV   + HY  LV  L + GQ  EA  M +KM
Sbjct:  383 VGLGMHGKA---DEALELFKEMVESGVKPNAVAFVGLLNACSHVG--YVEEARSYFDLMVREYGVEREIEHYGCLVDALCRTGQLQEAKTMIEKM 472          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A7N0VJB4_KALFE (DYW_deaminase domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VJB4_KALFE)

HSP 1 Score: 64.7 bits (156), Expect = 1.760e-7
Identity = 45/146 (30.82%), Postives = 69/146 (47.26%), Query Frame = 0
Query:  291 EVYAAVMKQCLEQQEPDVMRDVLEERIQAGGT----------MAPDARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKM 426
            EV+A ++K  +    P VM  VL+   + G               D  ++   LG    + RM E +ELF EM+ SGV P+ +    +LSGC+            +F+ ME  +G++P   HY  LV  L +AG+  EAI++   M
Sbjct:  298 EVHAQILKSSVPPDVP-VMNSVLDMYAKCGAMEYCIKVFDNMQIKDLTSWNTVLGGYAMSGRMLEGVELFHEMVSSGVNPDDVTFITLLSGCSHSG--LTDIGQQLFDAMEPEYGISPVQEHYACLVDILGRAGRIEEAISVVKTM 440          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A1J3E2L4_NOCCA (Pentatricopeptide repeat-containing protein (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3E2L4_NOCCA)

HSP 1 Score: 62.8 bits (151), Expect = 6.690e-7
Identity = 33/106 (31.13%), Postives = 56/106 (52.83%), Query Frame = 0
Query:  321 GTMAPDARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKM 426
            G  + D  ++   L C      + E + LFG M+ESGV+P+ I    + SGC+        +  ++FE M+  + V+P + HY  LV  L +AG+  EA+ + ++M
Sbjct:  360 GMSSKDLTSWNTMLNCYAINGDIEEEINLFGSMIESGVEPDGITFVALFSGCSDTG--LTEYGLSLFERMKSEFRVSPALEHYACLVDILGRAGKIEEAVKVVERM 463          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A8J5LB63_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LB63_ZINOF)

HSP 1 Score: 61.6 bits (148), Expect = 1.670e-6
Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 0
Query:  345 EALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKM 426
            EALELF +M + G++PN+I    +LS C+       R    +F  ME ++G+ PNV HYT LV  L ++G+  EA+ + + M
Sbjct:  471 EALELFYQMQKEGIRPNSITFLILLSACSHSG--LVREGCALFNCMENKFGIEPNVSHYTCLVDLLGRSGKLHEALDVINNM 550          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A1S2XD25_CICAR (pentatricopeptide repeat-containing protein At1g03540-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XD25_CICAR)

HSP 1 Score: 60.5 bits (145), Expect = 1.800e-6
Identity = 32/98 (32.65%), Postives = 48/98 (48.98%), Query Frame = 0
Query:  330 YELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKME 427
            +   + C G   R  E  E+FG M+E G +P+ +    +LS C+     F       FE ME R+GV P + HYT +V  L + G   EA  +  +M+
Sbjct:  178 WSTMMSCYGMHGRFEEVFEMFGRMVEEGKKPDGVTFTAVLSACSHGG--FVEKGREYFEMMEVRFGVKPELRHYTCMVDMLGRVGLVEEAEKLILRMD 273          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A2K1X8B2_POPTR (Uncharacterized protein n=3 Tax=Populus TaxID=3689 RepID=A0A2K1X8B2_POPTR)

HSP 1 Score: 60.8 bits (146), Expect = 2.550e-6
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 0
Query:  344 SEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKM 426
            + ALE+F +MLESGV PN +    +LSGC+         AN +F GM Q +G  P + HY  +V  L +AG   EA  + D M
Sbjct:  318 NHALEVFYDMLESGVIPNDVTFLLVLSGCSHSG--LLVEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNM 398          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A6A5MTT2_LUPAL (Putative tetratricopeptide-like helical domain, DYW domain-containing protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A6A5MTT2_LUPAL)

HSP 1 Score: 60.8 bits (146), Expect = 2.650e-6
Identity = 33/94 (35.11%), Postives = 48/94 (51.06%), Query Frame = 0
Query:  326 DARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEA 419
            D  A+   +G L       E LELFGEM+  GV+PNA+    +LS C        R  N  F+ M + +G++P + HY  +V    +AGQ  +A
Sbjct:  255 DVVAWSAMIGALAMHGCSEECLELFGEMINDGVRPNAVTCLGVLSACVHGG--LVREGNEYFKRMMKDYGISPLIQHYGCMVDLYSRAGQIEDA 346          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: A0A2G5DBK2_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DBK2_AQUCA)

HSP 1 Score: 60.5 bits (145), Expect = 3.720e-6
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 0
Query:  345 EALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKM 426
            EAL+LF  M++ GV+PN+I I  +LS C+     F   A  +FE M  R+G+ P++ HYT +V  L ++G+  +A  M + M
Sbjct:  420 EALQLFNCMVDEGVEPNSITILSILSACSHSG--FVTEACKVFEYMTGRFGIKPDLNHYTCMVDLLGRSGELCKAREMIENM 499          
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Match: UPI00109FED9A (pentatricopeptide repeat-containing protein At3g26782, mitochondrial isoform X3 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI00109FED9A)

HSP 1 Score: 60.1 bits (144), Expect = 4.120e-6
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0
Query:  333 ALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNVYHYTSLVTCLLKAGQWSEAIAMTDKME 427
            A G  G+ R   EAL+LF +ML+SG++PN I    +LS C+             F  ME+ + V  +V HYT +V  L +AG+  E + +T++M+
Sbjct:  178 AYGVHGRGR---EALQLFPQMLQSGIRPNRITFVSILSACSHSG--LIEEGRQFFNSMERDYFVESDVKHYTCMVDLLGRAGRLDEVLELTERMK 267          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7873.19147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZA3_ECTSI1.650e-19993.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6D2I7U4_9BRAS3.280e-842.11DYW_deaminase domain-containing protein n=1 Tax=Mi... [more]
A0A7N0VJB4_KALFE1.760e-730.82DYW_deaminase domain-containing protein n=1 Tax=Ka... [more]
A0A1J3E2L4_NOCCA6.690e-731.13Pentatricopeptide repeat-containing protein (Fragm... [more]
A0A8J5LB63_ZINOF1.670e-639.02Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A1S2XD25_CICAR1.800e-632.65pentatricopeptide repeat-containing protein At1g03... [more]
A0A2K1X8B2_POPTR2.550e-640.96Uncharacterized protein n=3 Tax=Populus TaxID=3689... [more]
A0A6A5MTT2_LUPAL2.650e-635.11Putative tetratricopeptide-like helical domain, DY... [more]
A0A2G5DBK2_AQUCA3.720e-639.02Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]
UPI00109FED9A4.120e-635.79pentatricopeptide repeat-containing protein At3g26... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 325..374
e-value: 9.7E-8
score: 32.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 402..427
e-value: 0.0054
score: 16.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 402..426
e-value: 0.002
score: 16.2
coord: 332..362
e-value: 2.2E-7
score: 28.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 11.477
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..427
score: 9.164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..393
score: 6.599
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 5.492
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 378..427
e-value: 1.4E-7
score: 33.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 233..377
e-value: 1.5E-15
score: 59.0
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 293..426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7873contigEcto-sp13_S_contig7873:1965..7207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7873.19147.1mRNA_Ecto-sp13_S_contig7873.19147.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7873 1965..7207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7873.19147.1 ID=prot_Ecto-sp13_S_contig7873.19147.1|Name=mRNA_Ecto-sp13_S_contig7873.19147.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=427bp
MCPCVIELTCDFHCSLRCLAQAMIHYAARRAYTTSLRQGGGGLNRWRAPG
RSRSAGTFAVYHADTADPVNTVSAQQQQQQQQQQGQQEQGGAEAASPAEE
HGEGSLEYMFDRRPATLGRDVGRMVRSGQDMLSPEIVDLMVSSSTRSTVG
SPPPLADTAGVDVFAVIAKAYHRLRRHDLTLQLCEAFEESTGEPLVPSTP
QGLVWLLGAIRRRRTTAPHSGRQPGKRDREGEGERGVKEVLRLYEEGGKD
VPVAAYTAAVEALAGCHCTVALEMAQEARSKLGNSAEGLGEVYAAVMKQC
LEQQEPDVMRDVLEERIQAGGTMAPDARAYELALGCLGKARRMSEALELF
GEMLESGVQPNAIAINHMLSGCARDAEKFWRHANTIFEGMEQRWGVAPNV
YHYTSLVTCLLKAGQWSEAIAMTDKME
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf