mRNA_Ecto-sp13_S_contig7870.19143.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7870.19143.1
Unique NamemRNA_Ecto-sp13_S_contig7870.19143.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A6H5KZC5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZC5_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.400e-57
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 1 
Query:  346 VLPADNDGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            +LPADNDGDYYQIAMLIEHLKAED+NLRVTATRSLPAIADALGPDRVRAEL+PFVNDSTDDEDEVLLCMAEQVGKLT H+GGKQHAHELLVPLEQLASVEESTV
Sbjct:   25 MLPADNDGDYYQIAMLIEHLKAEDINLRVTATRSLPAIADALGPDRVRAELIPFVNDSTDDEDEVLLCMAEQVGKLTVHLGGKQHAHELLVPLEQLASVEESTV 128
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A7S1STA0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1STA0_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 1.470e-27
Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = 1 
Query:  349 LPADNDGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            +P + D   Y IA+LI+ LK EDV LR+ + + L  IA ALG DR R EL+PF+ +S DDEDEVLL MAE++G    ++GG QHAH LL PLE L++VEE+ V
Sbjct:    1 MPDNGDDSLYPIAILIDELKNEDVALRLNSIKRLGTIALALGEDRTRKELIPFLTESNDDEDEVLLAMAEELGNFVRYVGGPQHAHVLLTPLESLSAVEETVV 103
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A7S1CBF4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBF4_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.220e-27
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 1 
Query:  361 NDGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            +DG  Y IA+LI+ LK EDV LR+ + + L  IA+ALG DR R EL+PF+N+S DD+DEVLL +AE++GK   ++GG +HAH LLVPLE LA+VEE TV
Sbjct:   13 DDGVLYPIAILIDELKHEDVQLRLNSIKRLDTIANALGVDRTRTELIPFLNESVDDDDEVLLVLAEELGKFVEYVGGPEHAHTLLVPLEGLATVEEMTV 111
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A162Q6I2_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162Q6I2_PHYB8)

HSP 1 Score: 117 bits (294), Expect = 6.180e-27
Identity = 56/96 (58.33%), Postives = 76/96 (79.17%), Query Frame = 1 
Query:  370 DYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            + Y +A+LI+ LK ED+ LR+ A + LP IADALG +R R EL+PF+ +S DD+DEVLL +AE++GKLT  +GG ++AH LLVPLE +A+VEESTV
Sbjct:   28 ELYSVAVLIDELKHEDIQLRLNAMKKLPIIADALGQERTREELIPFLRESIDDDDEVLLALAEELGKLTDAVGGPEYAHYLLVPLESIAAVEESTV 123
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A2R5GI85_9STRA (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI85_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.940e-26
Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:  352 PADNDGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            PAD++G  Y +A LI+ LK ED+ LR+ +   L  IA+ALGP+R R EL+PF+N+S DDEDEVLL +A+Q+G   +++GG  H H LL PLE LA+VEE TV
Sbjct:   17 PADDEGGLYTVATLIDELKHEDMQLRLNSMNKLAVIAEALGPERTRNELLPFLNESIDDEDEVLLVLAQQLGDFGSYVGGPSHLHVLLPPLEALATVEEPTV 118
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A0C3Q8Z7_9AGAM (Uncharacterized protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3Q8Z7_9AGAM)

HSP 1 Score: 108 bits (270), Expect = 8.180e-26
Identity = 58/101 (57.43%), Postives = 75/101 (74.26%), Query Frame = 1 
Query:  358 DNDGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGK-LTAHIGGKQHAHELLVPLEQLASVEESTV 657
            DN+ + Y IA+LI+ LK+EDVNLR+ A   +  IA ALGP R R EL+PF+ DS DDEDEVLL +AE++GK +  ++GG  HAH LL PLE LA+VEE+ V
Sbjct:    2 DNE-ELYPIAILIDELKSEDVNLRLNAIHRISTIALALGPQRAREELIPFLQDSLDDEDEVLLALAEELGKGMEEYLGGPPHAHLLLGPLENLAAVEETVV 101
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A8J6CFI4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFI4_DIALT)

HSP 1 Score: 113 bits (283), Expect = 1.920e-25
Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 1 
Query:  361 NDGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            ++ + Y IA+LI+ LK ED+ LR+ + R L  IA ALG DR R ELVPF+NDS DDEDEVLL MAE++GK   H+GG QHA  L+ PLE L ++EE++V
Sbjct:    7 DESELYPIAILIDELKNEDIQLRLNSIRRLSTIAVALGADRTRCELVPFLNDSIDDEDEVLLAMAEELGKFVPHVGGAQHASCLIPPLETLCAIEEASV 105
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A1Y3MRP8_PIRSE (Uncharacterized protein n=5 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y3MRP8_PIRSE)

HSP 1 Score: 112 bits (281), Expect = 2.570e-25
Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 1 
Query:  352 PADNDGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            P D     Y IA+LI+ LK +DV+LR+ A R+L  IA ALG DR R EL+PF+++S DDEDEVLL +AE++G L  H+GG  +AH LL PLE LA+VEE+ V
Sbjct:    3 PEDEVNSLYPIAVLIDELKHDDVSLRLNAIRNLTTIASALGVDRTREELIPFLDESIDDEDEVLLALAEELGNLIDHVGGPSYAHCLLSPLENLAAVEETVV 104
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A2P2IF25_9CRUS (Phosphoprotein phosphatase A (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IF25_9CRUS)

HSP 1 Score: 107 bits (267), Expect = 2.640e-25
Identity = 53/94 (56.38%), Postives = 72/94 (76.60%), Query Frame = 1 
Query:  376 YQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            + IA+LI+ L+ EDV  R+ A + L  IA+ALGP R R ELVP++N+S DDEDEV+L +AE++ KL   +GG +HAH LLVPLE L++VEE+TV
Sbjct:   16 HSIAVLIDELQKEDVQTRLGAIKKLGTIAEALGPVRTREELVPYLNESIDDEDEVILALAEELAKLIPFLGGSEHAHVLLVPLETLSTVEETTV 109
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BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Match: A0A453KHX0_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453KHX0_AEGTS)

HSP 1 Score: 104 bits (260), Expect = 4.480e-25
Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 1 
Query:  364 DGDYYQIAMLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDEVLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV 657
            D   Y IA+LI+ LK ED+ LR+ + R L  IA ALG +R R EL+PF++++ DDEDEVLL MAE++G    ++GG +HAH LL PLE L++VEE+ V
Sbjct:    5 DEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDEDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCV 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7870.19143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZC5_9PHAE3.400e-5795.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1STA0_9CHLO1.470e-2754.37Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7S1CBF4_9STRA4.220e-2758.59Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A162Q6I2_PHYB86.180e-2758.33Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]
A0A2R5GI85_9STRA3.940e-2654.90Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
A0A0C3Q8Z7_9AGAM8.180e-2657.43Uncharacterized protein n=1 Tax=Tulasnella calospo... [more]
A0A8J6CFI4_DIALT1.920e-2556.57Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A1Y3MRP8_PIRSE2.570e-2555.88Uncharacterized protein n=5 Tax=Neocallimastigacea... [more]
A0A2P2IF25_9CRUS2.640e-2556.38Phosphoprotein phosphatase A (Fragment) n=1 Tax=Hi... [more]
A0A453KHX0_AEGTS4.480e-2553.06Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7870contigEcto-sp13_S_contig7870:3880..6902 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score177.6
Seed ortholog evalue2.7e-42
Seed eggNOG ortholog2880.D8LTZ8
Preferred namePPP2R1B
Model size657
KEGG koko:K03456
KEGG Pathwayko03015,ko04071,ko04111,ko04113,ko04114,ko04151,ko04152,ko04261,ko04350,ko04390,ko04391,ko04530,ko04728,ko04730,ko05142,ko05160,ko05165,map03015,map04071,map04111,map04113,map04114,map04151,map04152,map04261,map04350,map04390,map04391,map04530,map04728,map04730,map05142,map05160,map05165
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000086,GO:0000159,GO:0000184,GO:0000188,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000819,GO:0000910,GO:0000956,GO:0001558,GO:0001932,GO:0001933,GO:0003674,GO:0003823,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0005739,GO:0005813,GO:0005814,GO:0005815,GO:0005816,GO:0005819,GO:0005826,GO:0005829,GO:0005856,GO:0005938,GO:0006139,GO:0006275,GO:0006355,GO:0006396,GO:0006401,GO:0006402,GO:0006464,GO:0006469,GO:0006470,GO:0006629,GO:0006643,GO:0006665,GO:0006672,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0006915,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007062,GO:0007088,GO:0007096,GO:0007098,GO:0007099,GO:0007135,GO:0007143,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007276,GO:0007292,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008287,GO:0008380,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009792,GO:0009889,GO:0009892,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010389,GO:0010467,GO:0010468,GO:0010556,GO:0010563,GO:0010564,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010921,GO:0010941,GO:0010942,GO:0010948,GO:0010974,GO:0012501,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017151,GO:0019208,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019888,GO:0019899,GO:0019932,GO:0019953,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030111,GO:0030155,GO:0030234,GO:0030308,GO:0030863,GO:0030864,GO:0030952,GO:0031023,GO:0031029,GO:0031030,GO:0031033,GO:0031034,GO:0031323,GO:0031324,GO:0031326,GO:0031399,GO:0031400,GO:0031967,GO:0031975,GO:0031991,GO:0032045,GO:0032153,GO:0032155,GO:0032268,GO:0032269,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032954,GO:0032955,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033673,GO:0034613,GO:0034622,GO:0034641,GO:0034655,GO:0035303,GO:0035304,GO:0035330,GO:0035331,GO:0035556,GO:0035770,GO:0036211,GO:0036464,GO:0040008,GO:0042221,GO:0042325,GO:0042326,GO:0042509,GO:0042532,GO:0042578,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043412,GO:0043549,GO:0043603,GO:0043666,GO:0043900,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044464,GO:0044703,GO:0044732,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045121,GO:0045132,GO:0045144,GO:0045495,GO:0045595,GO:0045786,GO:0045859,GO:0045926,GO:0045930,GO:0045936,GO:0046425,GO:0046426,GO:0046483,GO:0046578,GO:0046580,GO:0046626,GO:0046627,GO:0046700,GO:0046982,GO:0046983,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048856,GO:0050730,GO:0050732,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051056,GO:0051058,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051177,GO:0051179,GO:0051225,GO:0051231,GO:0051232,GO:0051239,GO:0051246,GO:0051248,GO:0051252,GO:0051276,GO:0051298,GO:0051301,GO:0051302,GO:0051304,GO:0051306,GO:0051321,GO:0051336,GO:0051338,GO:0051348,GO:0051445,GO:0051493,GO:0051640,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0051754,GO:0051782,GO:0051783,GO:0060255,GO:0060271,GO:0060281,GO:0060284,GO:0060293,GO:0060561,GO:0061492,GO:0061509,GO:0061919,GO:0061983,GO:0065003,GO:0065007,GO:0065009,GO:0070192,GO:0070262,GO:0070601,GO:0070727,GO:0070925,GO:0070938,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0071944,GO:0071988,GO:0072686,GO:0072698,GO:0080090,GO:0090304,GO:0090443,GO:0097711,GO:0098534,GO:0098589,GO:0098687,GO:0098772,GO:0098805,GO:0098813,GO:0098857,GO:0099568,GO:0110020,GO:0120031,GO:0120036,GO:0140013,GO:0140014,GO:0140056,GO:0140096,GO:1900076,GO:1900077,GO:1900193,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1901891,GO:1901892,GO:1901987,GO:1901990,GO:1902412,GO:1902413,GO:1902440,GO:1902494,GO:1902531,GO:1902532,GO:1902742,GO:1902749,GO:1903046,GO:1903047,GO:1903293,GO:1903429,GO:1903436,GO:1903437,GO:1903506,GO:1903538,GO:1904892,GO:1904893,GO:1905508,GO:1905742,GO:1905879,GO:1990405,GO:1990904,GO:2000112,GO:2000241,GO:2001141,GO:2001233,GO:2001235,GO:2001236,GO:2001238,GO:2001239,GO:2001241
Exons4
EggNOG free text desc.meiotic spindle elongation
EggNOG OGsKOG0211@1,KOG0211@2759
Cds size270
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464057.9000487-UTR-Ecto-sp13_S_contig7870:3879..41941681464057.9000487-UTR-Ecto-sp13_S_contig7870:3879..4194Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7870 3880..4194 +
1681464057.9141247-UTR-Ecto-sp13_S_contig7870:4294..43601681464057.9141247-UTR-Ecto-sp13_S_contig7870:4294..4360Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7870 4295..4360 +
1681464057.9249058-UTR-Ecto-sp13_S_contig7870:5591..55971681464057.9249058-UTR-Ecto-sp13_S_contig7870:5591..5597Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7870 5592..5597 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464057.943354-CDS-Ecto-sp13_S_contig7870:5597..57471681464057.943354-CDS-Ecto-sp13_S_contig7870:5597..5747Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7870 5598..5747 +
1681464057.9560907-CDS-Ecto-sp13_S_contig7870:6782..69021681464057.9560907-CDS-Ecto-sp13_S_contig7870:6782..6902Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7870 6783..6902 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7870.19143.1prot_Ecto-sp13_S_contig7870.19143.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7870 5598..6902 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7870.19143.1

>prot_Ecto-sp13_S_contig7870.19143.1 ID=prot_Ecto-sp13_S_contig7870.19143.1|Name=mRNA_Ecto-sp13_S_contig7870.19143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
MLIEHLKAEDVNLRVTATRSLPAIADALGPDRVRAELVPFVNDSTDDEDE
VLLCMAEQVGKLTAHIGGKQHAHELLVPLEQLASVEESTV
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mRNA from alignment at Ecto-sp13_S_contig7870:3880..6902+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7870.19143.1 ID=mRNA_Ecto-sp13_S_contig7870.19143.1|Name=mRNA_Ecto-sp13_S_contig7870.19143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3023bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7870:3880..6902+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGACAGAGACAGAGATTACATATCGAGCACAGGCTGACGGCAAAAAAGTT
TTGTTAGCGAAGCAAAGGGGCAACACTAGTTTGTTGCTGTTCCCACGAAC
CATCGTTGCGATTCAGCTACTGGCGAGGTCGCAAGCGAGGAGGAGGGGGC
GCCGCAGACAGGGAGATCGGCGAACAAGCTGCTGCGTAGCGGGCGGAGGA
GATTGCCGCTCCTGTAGCAACCGTTCGTACCTGGCGACCAGCCCTCTGCT
CCTGCTTTGTGGCCGAGCTGGGGTTCGCCGTGCTTCTGCGTTGGACCTCT
CTCTCTCTTTTTCAGGTTGACGTCATCGTTGTTTGCGGCCTGTAAGAGAA
ATATGTCGGCCATGGAAGTGGAGGTGGCGGCGGCCTCAACAACATCCCAA
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGACGACAACGGTGTT
GCCAGCCGACAACGATGGGGACTACTACCAGGTGAGCGAAGCAGCTGCTG
CAGCTGCTCGCTGCAGCTCGGGCCCTCATCTTTTTGGTGATGTATGGTCT
AATACTAGAGTTTTGGGCATCTTTCAGGATTGATTCGGTAGGCGATGATG
GCCGATGTCAAACTCACTCTCATCGTAGCTATGCATACGAGCAGTGCACC
GACTATTAACTGCGAAGGTAATCCTCGCGCCCGCTCTATCCTGTGGCGGT
TCGTGTATGCTACCCTTGTCGATACTCCCGGGGCTCAAACAGCAGCGCCC
GGAAGCGGTGCTTCGCTCCATGCTGCCATCACGCGCAAGACACCGCTACA
CAAGCGCGCAATTTGATTTGCTGCCGCACACTTCAGCTGCTGCTTCGAGA
ACCCACATGGCAAGTTGTTCCTGTTCCACACAGAGAACGAACCGAAGAGC
ACCCACAAACTGCAATGATGGGTCGCCGCAACGACGGCCACGGCAAAGAC
TTGTACAGTACTTACAGCAGCAGCAGCAGCAGTATACGGTGTGACGGGAA
AACGCCTTTTCGAGAACAAGCGAAAATTAGGGGTATATCGTAGGGGCGAG
GTATGGACCGGGCGCAGGCCACGGCAGCAGAAGCCGCCCTTACTTGAAGT
TTCCTCTGTTCCCAAGATGATCCAAGGGCCGAAGAATAAGAATGGCGACC
TTCCGGCTCTTCGAGGAATTGCTTACAGGCGATGTGCGCGCTGTCACGCT
CAAATCTGCTCCGATGGGGCTGTGATATCGAAGGCTGCCCATGGCGACCC
CAATACTCCTCAACTCTGTAGATCCAAACGGACACATTCGTCACAGCTGA
TCGCCGCGATGAGCGCCAATTCTCGAATTGCGGGCTATCCAAGCACACAT
TATTAGTGGTACAAGCTTCCGCTAACGACCTGTAGTTCAGCGGCTATCGA
TCTGAGATTTGCCGGGGCTCGGGAGTAGCGAGCAAAACCCAGACGAGCAT
TGAACAGCGCTTCTGATGTGCAATCCACAGACCTTGTTGTAGACACGCTT
TCCTGCTTGCGTCCTTTCATGTGAGGAATTTCTGGTCATGCTTTCTCTTG
TACTATTAACAGTTGTTTCCTGCCTCGATTCATCCCTGCGGAGAGCTTTC
TTGTACTTTTTCCACACCCCGCCCCTCCTGCTTACAACACCCTGTCCGAT
TATTTTCTTGAACTGTGCACTGCTGTTTCATATTCCTCTTGGGGTGGCGA
ACGGAAAACTAGATCGCGATGCTGATCGAGCACCTCAAGGCCGAGGACGT
CAACCTTAGGGTGACGGCCACGCGGAGTCTGCCAGCGATCGCCGACGCCC
TGGGGCCGGACCGCGTGCGGGCGGAACTGGTCCCGTTTGTGAACGATTCC
ACGGACGACGAGGACGAGGTAGGTTCGCGGGCGTGCTGCCTTCAATGTGG
TGTACGGGCCCCCCGTTAGAGCTCTTTGCAACAGCTGTTTATGTATGTGT
TGCATGAGTCTTGAGGGACAAGCCGTGAGGGTGTTGCTTCAAACGCGGCG
ACTCTCCCTGCCTCGTGTCGCACAGGTTTGAGTCAAGGCTCCATTTCGGT
TGGATTTGAGCTCAACAATAGTTTCGAATCTTTTCCCCTTCTTGACCGGT
GCGCTGCCTGACCTCGGCGAGTTATAGCGTTCACGGCGTTGGCACCTCTG
ATTGGTTTCGTGCCAACATGGCAAAAGCTGTTTTGGGGATTTTTTTTTGG
AAGAATGGGACCGGGTAGACCGCCTCAAGCGGGCCTTCAATGAAATATCC
AGACCCCCATTCCTGGGTATATGTACAGAGGTCTGACTGTCTACAGACCG
ATGGGAGTAGTGTAGGGCTTCCACAGAACCACGGGCAGAGGCTTGGATTA
CGCCGAGTCCAAAGTCATGCATCCGGGTCCAACACCGTGCTTGCCAGAAC
AACGATTCCACTGGTCATTTGCTGCCTAGCTTGCTCCTCCGTGTCTACCG
GGTGTTGCGTAAACGTATACCCCGTAGTACCCCTGACAATAATTATATTT
ACTCGAAAGAAGGAGCAGGCGTTCTTGTACGATTGCTCTCTGCCTTACGG
TCGATGCTATGGCTGTCAATGTCATGCTGTTTTTTTTGTTCTCGCAGGAT
CCCAGCACTGTCTATTTCTTGCGGCGGACGCCCCCCCCCCCCCCCCCGCC
CCCCCCACCCCCCATGGCCTTATTTTCAAAACTTCTTCCTTTCTGCTTTC
CATCTTTTAAATGTATTTCTTGCGGCGGACCCCCCCCCCCCCCGCGCGCC
CTAGCAGCCGGCAATGGCCGTATTCTAAAGACTGCTCCCTACTGTCGTCC
AATGTTCGAAGTTGCGGCGGCCTTGCTAAATAAACCCAAGATCTCAATCT
CTCAAGTACCACACGTTCCATTTAGCAACCCCACGACGCTCCCTCCCCCG
AAGGTGTTGCTCTGCATGGCGGAGCAGGTGGGGAAGCTAACTGCGCACAT
AGGAGGAAAGCAGCACGCGCATGAGCTCTTGGTGCCCTTGGAACAGCTGG
CGTCCGTGGAGGAAAGCACGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7870:3880..6902+

>mRNA_Ecto-sp13_S_contig7870.19143.1 ID=mRNA_Ecto-sp13_S_contig7870.19143.1|Name=mRNA_Ecto-sp13_S_contig7870.19143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=270bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7870:3880..6902+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGATCGAGCACCTCAAGGCCGAGGACGTCAACCTTAGGGTGACGGC
CACGCGGAGTCTGCCAGCGATCGCCGACGCCCTGGGGCCGGACCGCGTGC
GGGCGGAACTGGTCCCGTTTGTGAACGATTCCACGGACGACGAGGACGAG
GTGTTGCTCTGCATGGCGGAGCAGGTGGGGAAGCTAACTGCGCACATAGG
AGGAAAGCAGCACGCGCATGAGCTCTTGGTGCCCTTGGAACAGCTGGCGT
CCGTGGAGGAAAGCACGGTG
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