prot_Ecto-sp13_S_contig12288.1913.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12288.1913.1
Unique Nameprot_Ecto-sp13_S_contig12288.1913.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length228
Homology
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 8.460e-157
Identity = 222/227 (97.80%), Postives = 225/227 (99.12%), Query Frame = 0
Query:    1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGLADGGDGFSYSYGY 227
            MKTSFCSAAGLVVAAGF+SSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGE LRVAFVEENGGEGAVVNDL+QGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQ LIESLP+APAAARRQCLERCGLADGGDGFSYSYGY
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 2.200e-124
Identity = 177/227 (77.97%), Postives = 199/227 (87.67%), Query Frame = 0
Query:    1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGLADGGDGFSYSYGY 227
            MKTSFC+AAG V+AAG +S+  Q  GVVT QQQIT++NPEDFVF+LGGPEPDA VDGFQ+R A + Q+PALDGQGI+M LVNLD C INLPHIHPRATEM YVI GE LRVAFVEENGGEGAVVNDLAQGDV FFPQGLIHY+QNL CEP TFLAALNN+DPGA+TITTRFFELP EAIQAS+NFE+P LQ LIESLP+APAAAR+QCL+RC +A+ G+ FSY Y Y
Sbjct:    1 MKTSFCAAAGFVIAAGLMSAV-QVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTY 226          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG)

HSP 1 Score: 171 bits (432), Expect = 2.190e-49
Identity = 92/188 (48.94%), Postives = 117/188 (62.23%), Query Frame = 0
Query:   29 TAQQQITMFNPEDFVFTL-GGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFE-DPALQTLIESLPEAPAAARRQCLERCGL 214
            T  Q++  FN EDF+  L   P+      G  +    LG +PAL  QG+AM L+NL+ C  NLPH+HPRA+E  YVI G + +V F+EENG +  +VNDL QG  TF PQG IHY+ NLGCE    +AA NN+DPG +TI  +FF+LP  AI ASL    DP ++ L  SLP  PA    +CL RCG 
Sbjct:   37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGNV-QVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.910e-46
Identity = 80/99 (80.81%), Postives = 88/99 (88.89%), Query Frame = 0
Query:    1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATE 99
            MKT FC+AAG V+AAG +SST QASGVVTAQQQIT+FNPEDFVF+LGGPEPDA VDGFQIR   + Q+PALDGQGI+MALVNLD C INLPHIHPRATE
Sbjct:    1 MKT-FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 2.900e-45
Identity = 79/100 (79.00%), Postives = 88/100 (88.00%), Query Frame = 0
Query:    1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEM 100
            MKT FC+AAG V+AAG + ST QASGVVTAQQQIT+FNPEDFVF+LGGPEPDA VDGFQIR   + Q+PALDGQGI+MALVNLD C INLPHIHPRATE+
Sbjct:    1 MKT-FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG)

HSP 1 Score: 145 bits (365), Expect = 1.640e-39
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0
Query:   28 VTAQQQITMFNPEDFVFTLGGPEPDAPV-DGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFE-LPSEAIQASLN-FEDPALQTLIESLPEAPAAARRQCLERCGL 214
            +T  Q++++ + +DFVF     +    + DG +  AAT    PAL G  IAM +  +  C+INLPHIHPRATE+ ++  G+     F EENG    +VN L +G+VT FP G IH+EQNL CEP  F+AA N++DPG  TI + F   LP++ + ASL       ++ L + LP+ PA   ++C +RCGL
Sbjct:   46 ITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGKF-EAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0G4FMH1_VITBC (Cupin type-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMH1_VITBC)

HSP 1 Score: 144 bits (364), Expect = 5.590e-39
Identity = 72/185 (38.92%), Postives = 107/185 (57.84%), Query Frame = 0
Query:   29 TAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCG 213
            TA +  + F  EDFVF L   +      G ++R A +  +P+L G G++ AL  L  C +N   +HPRATE+ YVIN   L V FVEENGG   + N L  G ++F P+GL+H+  N GCE   FL+  N++DPG +TI    F++ S ++QA+ N +   +  +  S+P +P     +CL +CG
Sbjct:   33 TALKFRSQFKTEDFVFNLAAAKAGDAGKGGELRVAAVAAMPSLAGNGVSQALYRLYPCGMNSVQMHPRATELFYVINATELHVGFVEENGGR-TIENVLKTGQLSFVPKGLLHWHYNAGCEDAIFLSTFNHEDPGVLTIVNALFDINSTSLQAAFNVDADQIADIKSSIPASPVPGIAECLAKCG 216          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC)

HSP 1 Score: 145 bits (367), Expect = 7.360e-39
Identity = 76/175 (43.43%), Postives = 101/175 (57.71%), Query Frame = 0
Query:   42 FVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAA--RRQCLERCGL 214
            F F     E D    G  +  A++ Q PAL G G++  LV+L  C+IN PH+HPRATE+ Y+I G +  V F EENGG   V ND+ +GD  FFP  LIH++ N  CEP  F+A LN+DD G  TI   FF LP + +  +L  ++  +  L E LP  PA    R +C  +CGL
Sbjct:  147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRV-SVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0G4EA80_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA80_VITBC)

HSP 1 Score: 144 bits (363), Expect = 8.300e-39
Identity = 75/186 (40.32%), Postives = 107/186 (57.53%), Query Frame = 0
Query:   29 TAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGL 214
            TA +  + F    FVF L    P     G ++R A +G +P+L G G++  L  L  C +N   +HPRA+E+ YVIN   L V FVEENGG   V N L  G ++F P+GL+H+  N GCE   FL+  N++DPG VTI    F++ + ++QA+LN +   +  L  S+P +P     +CL RCGL
Sbjct:   34 TALKFRSQFGSSQFVFDLARMSPVDAGKGGELRKADVGSMPSLAGNGVSQVLYRLYPCGMNSVQMHPRASELFYVINATELVVGFVEENGGR-TVENTLKTGQLSFVPKGLMHWHYNAGCEDAVFLSTFNHEDPGVVTIVNALFDINATSLQAALNVDRALVADLKTSVPPSPVPGIAECLRRCGL 218          
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA)

HSP 1 Score: 142 bits (357), Expect = 1.260e-38
Identity = 77/191 (40.31%), Postives = 107/191 (56.02%), Query Frame = 0
Query:   28 VTAQQQITMFNPEDFVFTLGGPEPDAPVD----GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGL 214
            V+A + +  F+ EDFVF     E    VD    G   + A +   P +    +A     +  C INLPH+HPR TE  Y+I GEL  V FV E+G    V+ND+     TFFPQGL+HY+QN+GCEP  F++ L++ DPG + I      LP EAI A+ + ++  +  +   LP+ PA  R +CL RCGL
Sbjct:   13 VSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELT-VGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDW6_ECTSI8.460e-15797.80Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JV79_9PHAE2.200e-12477.97Cupin type-1 domain-containing protein n=6 Tax=Ect... [more]
A0A507FDZ0_9FUNG2.190e-4948.94Cupin type-1 domain-containing protein n=2 Tax=Chy... [more]
D7FIJ3_ECTSI2.910e-4680.81Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
D7FI68_ECTSI2.900e-4579.00Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A433DF28_9FUNG1.640e-3942.11RmlC-like cupin n=2 Tax=Jimgerdemannia flammicoron... [more]
A0A0G4FMH1_VITBC5.590e-3938.92Cupin type-1 domain-containing protein n=1 Tax=Vit... [more]
A0A0G4EJ88_VITBC7.360e-3943.43Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A0G4EA80_VITBC8.300e-3940.32Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A0L0GAB9_9EUKA1.260e-3840.31Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 92..112
score: 45.18
coord: 158..173
score: 27.91
coord: 125..145
score: 43.96
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 44..191
e-value: 2.3E-27
score: 106.9
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 49..186
e-value: 3.7E-21
score: 75.3
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 10..198
e-value: 1.2E-42
score: 147.7
NoneNo IPR availablePANTHERPTHR31238:SF14GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATEDcoord: 35..187
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 35..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.608
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 43..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12288contigEcto-sp13_S_contig12288:2068..3938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12288.1913.1mRNA_Ecto-sp13_S_contig12288.1913.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12288 2068..3938 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12288.1913.1 ID=prot_Ecto-sp13_S_contig12288.1913.1|Name=mRNA_Ecto-sp13_S_contig12288.1913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp
MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPE
PDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEM
QYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEP
VTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEA
PAAARRQCLERCGLADGGDGFSYSYGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf