mRNA_Ecto-sp13_S_contig7865.19134.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: D8LTV0_ECTSI (Enoyl-CoA hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV0_ECTSI) HSP 1 Score: 247 bits (630), Expect = 9.630e-79 Identity = 131/153 (85.62%), Postives = 133/153 (86.93%), Query Frame = 1
Query: 1 MVPAERCLSSPRCMSPPALVQQCRIASGRRILCECQCSAAGLEVNESSVELISPTRRGSPAEEREGGGHXXXXXXXXXGEDGVSCVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKELQRQ 459
MVPAERCLS PR PA VQ CRIASG RILCECQCSAAGL+VNES+VELISPTRR SPAEERE GGH GEDGVSCVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLE AERSESVLAVVITGSGGYFTSGADIKELQRQ
Sbjct: 1 MVPAERCLSPPRXXXXPASVQ-CRIASGGRILCECQCSAAGLKVNESTVELISPTRRDSPAEEREAGGHGGGWGRGGGGEDGVSCVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLETAERSESVLAVVITGSGGYFTSGADIKELQRQ 152
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A6H5K239_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K239_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 3.190e-22 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1
Query: 310 SKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKELQRQ 459
SKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKELQRQ
Sbjct: 18 SKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKELQRQ 67
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A1M3DIP5_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas sp. 67-36 TaxID=1895849 RepID=A0A1M3DIP5_9SPHN) HSP 1 Score: 67.8 bits (164), Expect = 5.490e-12 Identity = 29/58 (50.00%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 277 GIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKEL 450
GIAT+TL+RP+ ++A A++ ++ QL++RA+R + V ++ITGSGG FT+GADI+E+
Sbjct: 12 GIATITLDRPEKRNALTAAMWAQLGQLVDRADRDDRVGVIIITGSGGCFTAGADIEEM 69
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A6N4VR37_9MYCO (Enoyl-CoA hydratase n=5 Tax=Mycolicibacterium TaxID=1866885 RepID=A0A6N4VR37_9MYCO) HSP 1 Score: 69.7 bits (169), Expect = 2.350e-11 Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 247 VSCVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKE 447
+S +L ++ +G+ TLTLNRP+ K+A N L++R+ + L A+R + AVV+TG+GG F SGADI E
Sbjct: 1 MSVLLREDRDGVRTLTLNRPERKNAINPELWVRLAEELHAADRDPGLRAVVLTGAGGAFCSGADISE 67
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A351JY31_9CHLR (Enoyl-CoA hydratase/isomerase family protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A351JY31_9CHLR) HSP 1 Score: 69.3 bits (168), Expect = 2.780e-11 Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 253 CVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKE 447
C++YQ+EEGIAT+ LNRP+ +A N L+L + LE A + A++ITG G F++GAD+KE
Sbjct: 5 CIIYQKEEGIATVKLNRPRVLNAMNKQLWLEFQEALEDARNDPEIKALIITGEGRAFSTGADLKE 69
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: UPI0019EFAD4F (2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019EFAD4F) HSP 1 Score: 69.3 bits (168), Expect = 3.180e-11 Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 247 VSCVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKEL 450
VS ++Y+ EG+ T+TLNRP +AFN L+ + L++AER++ V +VITG+G F SG DIK++
Sbjct: 4 VSMIVYEINEGVGTITLNRPDVYNAFNEQLHTELASTLKQAERNDEVRCIVITGAGKAFCSGQDIKDI 71
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A523L9E5_9GAMM (Enoyl-CoA hydratase n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523L9E5_9GAMM) HSP 1 Score: 69.3 bits (168), Expect = 3.750e-11 Identity = 30/71 (42.25%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 238 EDGVSCVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKEL 450
E G +L EE+G+A +TLNRPK+++A +GA+ + Q L AER+ + +V+TG+GG F +G D+K +
Sbjct: 7 ETGTEDILAYEEDGVAVITLNRPKARNAMSGAMTAGLEQALNYAERATQIRCIVLTGAGGAFCAGGDVKGM 77
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A399XSE7_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A399XSE7_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 6.050e-11 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 244 GVSCVLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKE 447
G VLY E +G+AT+TLNRP K+AFN A Y V + L+ A+ S SV AVVI G+ G F++GADI E
Sbjct: 3 GEDAVLYAERDGVATVTLNRPSKKNAFNAAQYDGVRKALDLADES-SVRAVVIKGADGAFSAGADITE 69
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A2E0Y3L7_9GAMM (Enoyl-CoA hydratase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0Y3L7_9GAMM) HSP 1 Score: 68.2 bits (165), Expect = 1.040e-10 Identity = 30/71 (42.25%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 256 VLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGYFTSGADIKELQRQREC 468
+L +EE+GIA +TLNRP++++A +G + + ++L+ AER+ SV VV+TG+GG F +G D+K + Q +
Sbjct: 15 LLAREEDGIAVITLNRPEARNAMSGDMNAALARVLDYAERTPSVRCVVVTGAGGAFCAGGDVKGMAGQGDA 85
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Match: A0A497QDS6_THOAR (Crotonase n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A497QDS6_THOAR) HSP 1 Score: 67.8 bits (164), Expect = 1.190e-10 Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 256 VLYQEEEGIATLTLNRPKSKHAFNGALYLRVVQLLERAERSESVLAVVITGSGGY-FTSGADIKELQ 453
VLY+ +GIAT+T+NRPK +A N A+ R+ +L E+AE+ ESV VV+TG+G F +GADI E Q
Sbjct: 6 VLYEVTDGIATITINRPKKYNALNIAVVKRLRELFEQAEKDESVRVVVLTGTGEKAFAAGADITEFQ 72 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7865.19134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7865.19134.1 >prot_Ecto-sp13_S_contig7865.19134.1 ID=prot_Ecto-sp13_S_contig7865.19134.1|Name=mRNA_Ecto-sp13_S_contig7865.19134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp MVPAERCLSSPRCMSPPALVQQCRIASGRRILCECQCSAAGLEVNESSVEback to top mRNA from alignment at Ecto-sp13_S_contig7865:124..6903+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7865.19134.1 ID=mRNA_Ecto-sp13_S_contig7865.19134.1|Name=mRNA_Ecto-sp13_S_contig7865.19134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7865:124..6903+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7865:124..6903+ >mRNA_Ecto-sp13_S_contig7865.19134.1 ID=mRNA_Ecto-sp13_S_contig7865.19134.1|Name=mRNA_Ecto-sp13_S_contig7865.19134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7865:124..6903+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |