prot_Ecto-sp13_S_contig7864.19133.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7864.19133.1
Unique Nameprot_Ecto-sp13_S_contig7864.19133.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length151
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7864.19133.1 vs. uniprot
Match: A0A6H5JI99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI99_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 6.750e-96
Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0 
Query:    1 MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAFENSTGQAVGLVLILSWVAFCALAIWTVRGGLSIVILLHLGIIPLGVEVFESVLLFTSDASTFITYVLAVLNLVIVAPALVLVPVYFRFLRDEERRRRAPL 150
            MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAFENSTGQAVGLVLILSWVAFCALAIWTVRGGLSIVILLHLGI PLGVEVFESVLLFTS +STFITYVLAVLNLVIVAPALVLVPVYFRFLRDEERRRRAPL
Sbjct:   84 MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAFENSTGQAVGLVLILSWVAFCALAIWTVRGGLSIVILLHLGITPLGVEVFESVLLFTSSSSTFITYVLAVLNLVIVAPALVLVPVYFRFLRDEERRRRAPL 233
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7864.19133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI99_9PHAE6.750e-9698.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..150
NoneNo IPR availableTMHMMTMhelixcoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7864contigEcto-sp13_S_contig7864:154..606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7864.19133.1mRNA_Ecto-sp13_S_contig7864.19133.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7864 145..606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7864.19133.1 ID=prot_Ecto-sp13_S_contig7864.19133.1|Name=mRNA_Ecto-sp13_S_contig7864.19133.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=151bp
MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAF
ENSTGQAVGLVLILSWVAFCALAIWTVRGGLSIVILLHLGIIPLGVEVFE
SVLLFTSDASTFITYVLAVLNLVIVAPALVLVPVYFRFLRDEERRRRAPL
*
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