prot_Ecto-sp13_S_contig7861.19132.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7861.19132.1
Unique Nameprot_Ecto-sp13_S_contig7861.19132.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length255
Homology
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: A0A6H5L0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V0_9PHAE)

HSP 1 Score: 484 bits (1245), Expect = 4.470e-172
Identity = 240/254 (94.49%), Postives = 244/254 (96.06%), Query Frame = 0
Query:    1 MLLITRFITACTLLSCWSCQRCSGFVSSPLRSALLSPVGIKHHKHDNRSIRRRCGTRMAVAPTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDNKGQDDGELQQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA 254
            MLLI RFITACTLL+CWSCQRCSGFV SPLRSALLSPVG+K HKHDNRSIRR   TRMA APTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFD KGQDDGE+QQQ +IARTLRWLFFGFAVQAPWNHFFYV LDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA
Sbjct:   19 MLLIRRFITACTLLACWSCQRCSGFVCSPLRSALLSPVGMKQHKHDNRSIRRSGVTRMAAAPTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDTKGQDDGEVQQQLDIARTLRWLFFGFAVQAPWNHFFYVFLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA 272          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: D7FP55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP55_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 1.120e-136
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0
Query:   58 MAVAPTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDNKGQDDGELQQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA 254
            MA APTELWDSYLHALETAPLLTKSITAGCIFPAAD+VAQ FDNKGQDDGELQQQW+IARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQL+QDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA
Sbjct:    1 MAAAPTELWDSYLHALETAPLLTKSITAGCIFPAADSVAQWFDNKGQDDGELQQQWDIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLNQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEEA 197          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: A0A7S2W2E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2E8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.180e-75
Identity = 115/187 (61.50%), Postives = 139/187 (74.33%), Query Frame = 0
Query:   63 TELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDNKGQDDGELQQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGE 249
            TE W SY HALET PLLTKSITAG I  AAD   Q  +   + +GE     ++AR +R+ FFG  +QAPWNHF+Y LLDGALPPT DP +TTT +KV IDQFVQAP+FTV+IF  LGLLEGK +  +++QLD DYK TM+ANW ++VPA  VN+AFCPP LRVLFLN VFF W+IFLS  ++K   E
Sbjct:   54 TEAWVSYNHALETDPLLTKSITAGVILGAADLAGQALERSQKKEGEESSSVDLARAVRFAFFGLVLQAPWNHFYYQLLDGALPPTADPFTTTTGIKVAIDQFVQAPVFTVLIFYFLGLLEGKTMESVKQQLDNDYKDTMIANWKLWVPATAVNIAFCPPLLRVLFLNCVFFFWSIFLSLKLNKEEEE 240          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: B8BXV6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV6_THAPS)

HSP 1 Score: 233 bits (594), Expect = 3.340e-74
Identity = 116/188 (61.70%), Postives = 140/188 (74.47%), Query Frame = 0
Query:   64 ELWDSYLHALETAPLLTKSITAGCIFPAAD----AVAQRFDNKGQDDGEL--QQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 245
            E+W SYL+ALE+ PLL KS+TAG I  AAD    A+ Q       DD         +IAR LR+ FFGF +QAPWNHF+Y+LLDGALPPTPDP + TT +KVL+DQF+QAPIFTV+IF  LG LEGK V +I++QLD DY  TMLANW ++VPA  VN+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:    4 EVWTSYLNALESDPLLVKSVTAGVILGAADLSGQAIQQSLAKANSDDATTITDSGVDIARFLRFAFFGFILQAPWNHFYYLLLDGALPPTPDPFTATTGIKVLVDQFIQAPIFTVIIFAFLGFLEGKTVEEIKKQLDDDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 191          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: A0A7S1YNW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YNW0_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.080e-73
Identity = 119/193 (61.66%), Postives = 144/193 (74.61%), Query Frame = 0
Query:   63 TELWDSYLHALETAPLLTKSITAGCIFPAAD----AVAQRFDNKGQDDGELQ------QQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 245
            TE W+SYL ALE  PLL KSITAG I  AAD    A+ Q       D+ EL          +IAR LR+ FFGF +QAPWNHF+Y +LDGALPPT DP ++TTA+KV+IDQF+QAPIFTV+IFG LG+LEGK++  I+EQLD+DY  TMLANW ++VPA  VN+AFCPP LRVLFLNVVFF W+IFLS  ++K
Sbjct:   79 TEAWNSYLDALEANPLLVKSITAGVILGAADLSGQALQQAIATNNDDNMELSTNNNNSNSVDIARFLRFAFFGFILQAPWNHFYYQILDGALPPTEDPFTSTTAIKVIIDQFIQAPIFTVIIFGFLGVLEGKSLDSIKEQLDEDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 271          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: A0A7S0BVQ8_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVQ8_9STRA)

HSP 1 Score: 229 bits (585), Expect = 7.950e-72
Identity = 116/208 (55.77%), Postives = 146/208 (70.19%), Query Frame = 0
Query:   51 RRRCGTRMAVAP-------------TELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDNKGQDDGELQQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 245
            +R   TR+AV P             ++LW SY  ALET PL+TKSITAG I  AAD   Q  + K ++  E +   +  R  R+ FFGF +QAPWNHF+Y+LLDGALPPT DPL+ TT +KV+IDQFVQAPIFTV+IF  LGLLEGK +  I +QL+ DYK+TM+ANW ++VPA  VN+AFCPP  RVLFLN VFF W+I+LS  ++K
Sbjct:   56 KRNSSTRLAVVPGIDDSVITIATSASDLWTSYNSALETDPLITKSITAGVILGAADFAGQALEAKTKESSE-ETSIDFGRAARFAFFGFILQAPWNHFYYLLLDGALPPTDDPLTATTGIKVVIDQFVQAPIFTVIIFVFLGLLEGKNIESINKQLENDYKNTMVANWKLWVPATAVNIAFCPPLFRVLFLNCVFFFWSIYLSLTLNK 262          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: A0A7S3PZB9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 9.020e-72
Identity = 117/190 (61.58%), Postives = 140/190 (73.68%), Query Frame = 0
Query:   66 WDSYLHALETAPLLTKSITAGCIFPAADAVAQRFD--NKGQDDGELQQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVEE 253
            W SY  ALE  PLLTKSITAG I  AAD   Q  +  N G+D+       + AR  R+ FFGF +QAPWNHF+Y+ LDGALPPT DPLS TT +KV+IDQFVQAPIFTV+IF  LGLLEGK+ +D++EQLD+DYK TM ANW ++VPA  VN+AFCPP LRVLFLN VFF W+IFLS  ++    EA +E
Sbjct:   75 WTSYNIALEEDPLLTKSITAGVILGAADFAGQALERSNSGEDNPV-----DYARAARFAFFGFILQAPWNHFYYLFLDGALPPTEDPLSATTGIKVVIDQFVQAPIFTVIIFFFLGLLEGKSASDVKEQLDRDYKDTMFANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNSDGEEAPKE 259          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: K0R1J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R1J6_THAOC)

HSP 1 Score: 228 bits (580), Expect = 3.750e-71
Identity = 127/251 (50.60%), Postives = 158/251 (62.95%), Query Frame = 0
Query:    1 MLLITRFITACTLLSCWSCQRCSGFVSSPLRSALLSPVGIKH-----HKHDNRSIRRRCGTRMAVAPTE-LWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDNKGQDDGELQQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSK 245
            +L++   + ACT       + C+ F  + LR   L     K+     H H      R+  T +  A  E  W+SYL ALE  PLL KS+TAG I  AAD   Q   +   +D       +IAR  R+ FFGF +QAPWNH +Y+LLDGALPPT DP + TT VKVLIDQFVQAPIFTV+IF  LG LEGK   +I++QLD DYK TM+ANW ++VPA  VN+AFCPP LRVLFLN VFF W+IFLS  ++K
Sbjct:   11 LLVLLVLVGACT-------RECAAFAPAGLRPEELQVRPQKNRQASGHPHPMLQRSRQPTTSLEFAGLEGAWESYLDALEADPLLVKSVTAGVILGAADLAGQAIQSTNDEDSGGV---DIARFARFAFFGFILQAPWNHAYYLLLDGALPPTEDPFTATTGVKVLIDQFVQAPIFTVIIFAFLGFLEGKTSEEIKQQLDDDYKDTMIANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNK 251          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: A0A7S4EG90_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG90_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.820e-70
Identity = 111/193 (57.51%), Postives = 138/193 (71.50%), Query Frame = 0
Query:   62 PTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDNKGQDDGELQQQW--EIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEAVE 252
            P + W +Y  ALET+PLL KS+TAG I  AAD   Q F+    DD         ++ART+R+ FFGF +QAPWNHF+Y LLDGA+PPT DP ++TTAVK +IDQFVQAPIFTV+IF  LG LEGK +  I++QLD DY  TM+ANW ++VPA V+NLAF PP LRVL+LN VFF W+IFLS  ++K      E
Sbjct:   39 PQQAWTAYNDALETSPLLVKSVTAGVILGAADLAGQAFEGAQSDDESSSNDTGIDVARTVRFAFFGFILQAPWNHFYYTLLDGAIPPTVDPWTSTTAVKTVIDQFVQAPIFTVLIFAFLGFLEGKNLEAIKKQLDDDYADTMVANWKLWVPATVINLAFVPPILRVLYLNCVFFFWSIFLSLKLNKDGDNTTE 231          
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Match: A0A7S2XVN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.620e-69
Identity = 114/192 (59.38%), Postives = 139/192 (72.40%), Query Frame = 0
Query:   63 TELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFDNKGQDDGELQQQWE-----IARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGE 249
            + LWDSYL ALE+ PL+TKSITA  I PAAD  AQ  + + + D +     E      AR LR+  FG  +QAPWNHF+Y+ LD A+PPT D  +TTTAVKV IDQFVQAP+FTV+IF  LGLLEGKA++ IR QL  DY ST+ ANW ++VPAA  NLAFCPP+LRVLF N+VFF W+IF+S VV+K   E
Sbjct:   52 SSLWDSYLAALESQPLITKSITAAAILPAADFSAQLLEKQKETDEKSIDSKESDGIDAARVLRFSIFGLLLQAPWNHFYYLYLDSAIPPTEDAFTTTTAVKVFIDQFVQAPVFTVLIFVALGLLEGKALSSIRTQLKDDYWSTLQANWKLWVPAATFNLAFCPPQLRVLFTNLVFFFWSIFISLVVNKEKTE 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7861.19132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V0_9PHAE4.470e-17294.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP55_ECTSI1.120e-13697.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W2E8_9STRA1.180e-7561.50Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B8BXV6_THAPS3.340e-7461.70Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S1YNW0_9STRA2.080e-7361.66Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S0BVQ8_9STRA7.950e-7255.77Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S3PZB9_9STRA9.020e-7261.58Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
K0R1J6_THAOC3.750e-7150.60Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4EG90_9STRA1.820e-7057.51Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2XVN5_9STRA1.620e-6959.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 179..240
e-value: 2.3E-19
score: 69.4
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 65..243
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 65..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 244..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 219..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..201
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.584
NoneNo IPR availableTMHMMTMhelixcoord: 201..220
NoneNo IPR availableTMHMMTMhelixcoord: 225..244
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 159..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7861contigEcto-sp13_S_contig7861:743..4899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7861.19132.1mRNA_Ecto-sp13_S_contig7861.19132.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7861 734..5738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7861.19132.1 ID=prot_Ecto-sp13_S_contig7861.19132.1|Name=mRNA_Ecto-sp13_S_contig7861.19132.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
MLLITRFITACTLLSCWSCQRCSGFVSSPLRSALLSPVGIKHHKHDNRSI
RRRCGTRMAVAPTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFD
NKGQDDGELQQQWEIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDP
LSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKST
MLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPGEA
VEEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22