prot_Ecto-sp13_S_contig7859.19130.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7859.19130.1
Unique Nameprot_Ecto-sp13_S_contig7859.19130.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A7R9VRQ8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VRQ8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.770e-16
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+AS+ RTYRLFRTLGLR LCVVNH+NQVVGI+TRKDLLP  L
Sbjct:   59 ETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPESL 101          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: W7U4Q6_9STRA (Chloride channel 7 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4Q6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 8.100e-16
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+ASL RTYRLFRT+GLRHLCVVN HNQV GI+TR DLLP +L
Sbjct:   10 ETASLVRTYRLFRTMGLRHLCVVNSHNQVTGIITRYDLLPDNL 52          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.580e-15
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+AS+ RTYRLFRTLGLR LCVVNH+NQVVGI+TRKDLLP  L
Sbjct:  678 ETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPASL 720          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A7R9ZRT7_9STRA (Chloride channel protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRT7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 6.810e-15
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+AS+ RTYRLFRTLGLR LCVVNH+NQVVGI+TRKDLLP  L
Sbjct:  257 ETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPEAL 299          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.540e-15
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+AS+ RTYRLFRTLGLR LCVVNH+NQVVGI+TRKDLLP  L
Sbjct:  734 ETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPESL 776          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A7S2YMG2_9STRA (Chloride channel protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMG2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.170e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+AS+ RTYRLFRTLGLR LCVVNH+NQVVGI+TRKDLLP  L
Sbjct:  673 ETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPEAL 715          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO)

HSP 1 Score: 75.5 bits (184), Expect = 1.170e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+AS+ RTYRLFRTLGLR LCVVNH+NQVVGI+TRKDLLP  L
Sbjct:  801 ETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPRAL 843          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A7S4S7C7_9STRA (Chloride channel protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7C7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.170e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+AS+ RTYRLFRTLGLR LCVVNH+NQVVGI+TRKDLLP  L
Sbjct:  815 ETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPEAL 857          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A4D9D9F8_9STRA (Chloride channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9F8_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.980e-14
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGHL 51
            E+ASL RTYRLFRT+GLRHLCVVN HNQV GI+TR DLLP +L
Sbjct:  886 ETASLVRTYRLFRTMGLRHLCVVNSHNQVTGIITRYDLLPDNL 928          
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Match: A0A7S1D5H2_CYCTE (Chloride channel protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H2_CYCTE)

HSP 1 Score: 73.9 bits (180), Expect = 3.980e-14
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    9 ESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLP 48
            E+AS+ RTYRLFRTLGLR L VVNHHNQVVGI+TRKDLLP
Sbjct:  374 ETASIQRTYRLFRTLGLRFLVVVNHHNQVVGIITRKDLLP 413          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7859.19130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9VRQ8_9STRA1.770e-1681.40Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
W7U4Q6_9STRA8.100e-1679.07Chloride channel 7 n=1 Tax=Nannochloropsis gaditan... [more]
A0A7S0UJS8_9STRA4.580e-1581.40Chloride channel protein n=1 Tax=Pseudo-nitzschia ... [more]
A0A7R9ZRT7_9STRA6.810e-1581.40Chloride channel protein n=1 Tax=Craspedostauros a... [more]
A0A1E7FXI3_9STRA8.540e-1581.40Chloride channel protein n=1 Tax=Fragilariopsis cy... [more]
A0A7S2YMG2_9STRA1.170e-1481.40Chloride channel protein n=1 Tax=Amphiprora paludo... [more]
A0A1Z5JAK4_FISSO1.170e-1481.40Chloride channel protein n=2 Tax=Fistulifera solar... [more]
A0A7S4S7C7_9STRA1.170e-1481.40Chloride channel protein n=3 Tax=Ditylum brightwel... [more]
A0A4D9D9F8_9STRA2.980e-1479.07Chloride channel protein n=2 Tax=Monodopsidaceae T... [more]
A0A7S1D5H2_CYCTE3.980e-1485.00Chloride channel protein n=1 Tax=Cyclophora tenuis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.580.10coord: 6..50
e-value: 6.4E-10
score: 41.3
NoneNo IPR availablePANTHERPTHR11689CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBERcoord: 9..47
NoneNo IPR availablePANTHERPTHR11689:SF136CHLORIDE CHANNEL PROTEIN Bcoord: 9..47
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 9..47
IPR000644CBS domainPFAMPF00571CBScoord: 9..47
e-value: 3.6E-6
score: 27.3
IPR000644CBS domainPROSITEPS51371CBScoord: 1..51
score: 8.573

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7859contigEcto-sp13_S_contig7859:6050..7151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7859.19130.1mRNA_Ecto-sp13_S_contig7859.19130.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7859 6050..7151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7859.19130.1 ID=prot_Ecto-sp13_S_contig7859.19130.1|Name=mRNA_Ecto-sp13_S_contig7859.19130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
MFGLTPRAESASLNRTYRLFRTLGLRHLCVVNHHNQVVGIVTRKDLLPGH
L
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom