mRNA_Ecto-sp13_S_contig12288.1913.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 442 bits (1137), Expect = 8.460e-157 Identity = 222/227 (97.80%), Postives = 225/227 (99.12%), Query Frame = 1
Query: 1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGLADGGDGFSYSYGY 681
MKTSFCSAAGLVVAAGF+SSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGE LRVAFVEENGGEGAVVNDL+QGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQ LIESLP+APAAARRQCLERCGLADGGDGFSYSYGY
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 360 bits (925), Expect = 2.200e-124 Identity = 177/227 (77.97%), Postives = 199/227 (87.67%), Query Frame = 1
Query: 1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGLADGGDGFSYSYGY 681
MKTSFC+AAG V+AAG +S+ Q GVVT QQQIT++NPEDFVF+LGGPEPDA VDGFQ+R A + Q+PALDGQGI+M LVNLD C INLPHIHPRATEM YVI GE LRVAFVEENGGEGAVVNDLAQGDV FFPQGLIHY+QNL CEP TFLAALNN+DPGA+TITTRFFELP EAIQAS+NFE+P LQ LIESLP+APAAAR+QCL+RC +A+ G+ FSY Y Y
Sbjct: 1 MKTSFCAAAGFVIAAGLMSAV-QVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTY 226
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 171 bits (432), Expect = 2.190e-49 Identity = 92/188 (48.94%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 85 TAQQQITMFNPEDFVFTL-GGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFE-DPALQTLIESLPEAPAAARRQCLERCGL 642
T Q++ FN EDF+ L P+ G + LG +PAL QG+AM L+NL+ C NLPH+HPRA+E YVI G + +V F+EENG + +VNDL QG TF PQG IHY+ NLGCE +AA NN+DPG +TI +FF+LP AI ASL DP ++ L SLP PA +CL RCG
Sbjct: 37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGNV-QVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.910e-46 Identity = 80/99 (80.81%), Postives = 88/99 (88.89%), Query Frame = 1
Query: 1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATE 297
MKT FC+AAG V+AAG +SST QASGVVTAQQQIT+FNPEDFVF+LGGPEPDA VDGFQIR + Q+PALDGQGI+MALVNLD C INLPHIHPRATE
Sbjct: 1 MKT-FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI) HSP 1 Score: 156 bits (395), Expect = 2.900e-45 Identity = 79/100 (79.00%), Postives = 88/100 (88.00%), Query Frame = 1
Query: 1 MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEM 300
MKT FC+AAG V+AAG + ST QASGVVTAQQQIT+FNPEDFVF+LGGPEPDA VDGFQIR + Q+PALDGQGI+MALVNLD C INLPHIHPRATE+
Sbjct: 1 MKT-FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG) HSP 1 Score: 145 bits (365), Expect = 1.640e-39 Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 1
Query: 82 VTAQQQITMFNPEDFVFTLGGPEPDAPV-DGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFE-LPSEAIQASLN-FEDPALQTLIESLPEAPAAARRQCLERCGL 642
+T Q++++ + +DFVF + + DG + AAT PAL G IAM + + C+INLPHIHPRATE+ ++ G+ F EENG +VN L +G+VT FP G IH+EQNL CEP F+AA N++DPG TI + F LP++ + ASL ++ L + LP+ PA ++C +RCGL
Sbjct: 46 ITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGKF-EAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0G4FMH1_VITBC (Cupin type-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMH1_VITBC) HSP 1 Score: 144 bits (364), Expect = 5.590e-39 Identity = 72/185 (38.92%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 85 TAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCG 639
TA + + F EDFVF L + G ++R A + +P+L G G++ AL L C +N +HPRATE+ YVIN L V FVEENGG + N L G ++F P+GL+H+ N GCE FL+ N++DPG +TI F++ S ++QA+ N + + + S+P +P +CL +CG
Sbjct: 33 TALKFRSQFKTEDFVFNLAAAKAGDAGKGGELRVAAVAAMPSLAGNGVSQALYRLYPCGMNSVQMHPRATELFYVINATELHVGFVEENGGR-TIENVLKTGQLSFVPKGLLHWHYNAGCEDAIFLSTFNHEDPGVLTIVNALFDINSTSLQAAFNVDADQIADIKSSIPASPVPGIAECLAKCG 216
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 145 bits (367), Expect = 7.360e-39 Identity = 76/175 (43.43%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 124 FVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAA--RRQCLERCGL 642
F F E D G + A++ Q PAL G G++ LV+L C+IN PH+HPRATE+ Y+I G + V F EENGG V ND+ +GD FFP LIH++ N CEP F+A LN+DD G TI FF LP + + +L ++ + L E LP PA R +C +CGL
Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRV-SVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0G4EA80_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA80_VITBC) HSP 1 Score: 144 bits (363), Expect = 8.300e-39 Identity = 75/186 (40.32%), Postives = 107/186 (57.53%), Query Frame = 1
Query: 85 TAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGL 642
TA + + F FVF L P G ++R A +G +P+L G G++ L L C +N +HPRA+E+ YVIN L V FVEENGG V N L G ++F P+GL+H+ N GCE FL+ N++DPG VTI F++ + ++QA+LN + + L S+P +P +CL RCGL
Sbjct: 34 TALKFRSQFGSSQFVFDLARMSPVDAGKGGELRKADVGSMPSLAGNGVSQVLYRLYPCGMNSVQMHPRASELFYVINATELVVGFVEENGGR-TVENTLKTGQLSFVPKGLMHWHYNAGCEDAVFLSTFNHEDPGVVTIVNALFDINATSLQAALNVDRALVADLKTSVPPSPVPGIAECLRRCGL 218
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 142 bits (357), Expect = 1.260e-38 Identity = 77/191 (40.31%), Postives = 107/191 (56.02%), Query Frame = 1
Query: 82 VTAQQQITMFNPEDFVFTLGGPEPDAPVD----GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGELLRVAFVEENGGEGAVVNDLAQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQTLIESLPEAPAAARRQCLERCGL 642
V+A + + F+ EDFVF E VD G + A + P + +A + C INLPH+HPR TE Y+I GEL V FV E+G V+ND+ TFFPQGL+HY+QN+GCEP F++ L++ DPG + I LP EAI A+ + ++ + + LP+ PA R +CL RCGL
Sbjct: 13 VSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELT-VGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12288.1913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12288.1913.1 >prot_Ecto-sp13_S_contig12288.1913.1 ID=prot_Ecto-sp13_S_contig12288.1913.1|Name=mRNA_Ecto-sp13_S_contig12288.1913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp MKTSFCSAAGLVVAAGFVSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEback to top mRNA from alignment at Ecto-sp13_S_contig12288:2068..3938- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12288.1913.1 ID=mRNA_Ecto-sp13_S_contig12288.1913.1|Name=mRNA_Ecto-sp13_S_contig12288.1913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1871bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12288:2068..3938- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12288:2068..3938- >mRNA_Ecto-sp13_S_contig12288.1913.1 ID=mRNA_Ecto-sp13_S_contig12288.1913.1|Name=mRNA_Ecto-sp13_S_contig12288.1913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=684bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12288:2068..3938- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |