mRNA_Ecto-sp13_S_contig12274.1912.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 911 bits (2355), Expect = 0.000e+0 Identity = 470/510 (92.16%), Postives = 485/510 (95.10%), Query Frame = 1
Query: 1 VKGCASFGLVIGPGLGGLLAEPATHYPTVFSESGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLPISEAGTVETHEAATVEEGGMVEMTSTARTQNTLESDTNRSGRDNILLADRRTKGSRAARYDDGIEGRSGTADCYDIDEDHGRNSGEQSHQLLSASARSSNVDCVDDGDDRDEAAAFGAGDGRKSNRESFRTTSRALQRFEKAKGFDDRGSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASWGTIFSPESIESQAAACVVPARDRGQYSQEREYEYHGGVMAEESQGDAGKAMTK 1530
V GCAS GLVIGPGLGGLLAEPATHYPTVFS+SGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLL +SEAGTVETHEAATVEEGGMVEMT TARTQNTLESDTN SGRDNILLADRR +GSRA RYD GIEGRSGTADCYDIDEDHGRNSGEQS QLLSAS RSSN D VDDGD+RDEAAAFGAG GRKSNRE FRTT+RALQR EKAKGF D SGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYAL+SFVAIG+RELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAV+PSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMV+VSWASWGTI SPE ++SQ+AACVVPARDR +YSQEREYEYHGGV AE+S GDA KA+ K
Sbjct: 163 VLGCASIGLVIGPGLGGLLAEPATHYPTVFSQSGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLSVSEAGTVETHEAATVEEGGMVEMTPTARTQNTLESDTNGSGRDNILLADRRAEGSRAVRYDGGIEGRSGTADCYDIDEDHGRNSGEQSRQLLSASGRSSNDDYVDDGDERDEAAAFGAGGGRKSNRERFRTTTRALQRLEKAKGFGDSDSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALFSFVAIGNRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVEPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVLVSWASWGTICSPEPVQSQSAACVVPARDRWKYSQEREYEYHGGVTAEKSLGDASKAIPK 672
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 396 bits (1018), Expect = 3.030e-126 Identity = 255/548 (46.53%), Postives = 312/548 (56.93%), Query Frame = 1
Query: 1 VKGCASFGLVIGPGLGGLLAEPATHYPTVFSESGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRG--DSSGEFKLLPISEAGTV-ETHEAATVE-EGGMVEMTSTARTQNTLESDTNRSGRDNIL---LADRRTKGSRAARYDDGIEGRSGTADCYDIDEDHGRNSGEQSHQLLSASARSSNVDCVDDGDDRDEAA------------AFG-AGDGRKSNRESFRTTSRA------------------------------------------LQRFEKAKGFDDRGSGGEGRWG--RRSTCWRECLVPIQLLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGR-RRPFPLDYHLAFYLLALGMVVVSWASWGTIFS--PESIESQAAACVVPARDRG 1443
+ GC SFGLVIGP GGLLA+PATHYP VFSESGLFGR+PYLLPN+VGA IA +GLP VFFFLKET ++ + R D+ F + SE + ET E E GG +E+T ++ + + D L L +R + S A G G + + GR + + + + D V GD+ + A+ +FG G R S+ + F R + F G D + GE + RRS WRECLVP++LL E+R R ++FVY +YSF IG E+YPLWALSTVASGGLDW++KQIGQ LS+ G+ ML FQL+VYP LSKRIG TRSQRWACFL+IPV+ FP LS LRG+ LV S+VL F +N A VFIN+ALATNNAV+PSRR TL GLSMT GSLAKAAGP FFS+IFAWSID RRPFPLDYHL FYLLAL M V WASW I P + S+AAA + A G
Sbjct: 142 ITGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETTNLGDGRSVTDTRAGFDPVATSEPSPLLETQETGMEEGRGGQLELTPLTQSNSLDDVDXXXXXXXXHLAELLGERSEECSSARATVSTAAGGDGGGHRAVVPDSKGRGGSSAWEKSIGGAINIPSNDRVTLGDESETASKKIDVDRYGVGNSFGDGGSNRNSSGDRFLQPPREAPSGGASHSSPVGRSETLGFAGSTKGSPSGRRDHIGDDLGNRVTGFSTEDGGDTSCAAGESQTATTRRSAVWRECLVPVRLLEEKRVRAILFVYGIYSFSLIGFGEIYPLWALSTVASGGLDWTTKQIGQVLSLVGVGMLAFQLVVYPWLSKRIGVTRSQRWACFLAIPVYAFFPFLSRLRGSGVPLVVGSIVLNFFSNVTATAVFINIALATNNAVEPSRRATLNGLSMTLGSLAKAAGPAFFSAIFAWSIDDDGRRPFPLDYHLVFYLLALSMTAVCWASWNVIIDDLPPATGSKAAAAAIAADTDG 689
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: A0A6H5KYW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW2_9PHAE) HSP 1 Score: 367 bits (943), Expect = 6.060e-122 Identity = 190/201 (94.53%), Postives = 194/201 (96.52%), Query Frame = 1
Query: 940 MLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASWGTIFSPESIESQAAACVVPARDRGQYSQEREYEYHGGVMAEESQGDAGKAMTKQVSS 1542
MLFFQLL+YPRLSKRIGATRSQRWACFLSIPVF+VFPTLSHLR TERTLVAASLVLLFLTNAVANTVFINVALATNNAV PSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASWGTIFSPE IESQA ACVVPAR RG+YSQERE+EYH GVMAEESQGDA KAMTKQVSS
Sbjct: 1 MLFFQLLLYPRLSKRIGATRSQRWACFLSIPVFIVFPTLSHLRDTERTLVAASLVLLFLTNAVANTVFINVALATNNAVGPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASWGTIFSPEPIESQATACVVPARGRGKYSQEREHEYHSGVMAEESQGDARKAMTKQVSS 201
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.360e-81 Identity = 209/518 (40.35%), Postives = 259/518 (50.00%), Query Frame = 1
Query: 1 VKGCASFGLVIGPGLGGLLAEPATHYPTVFSESGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRG--DSSGEFKLLPISEAGTVETHEAATVEEG--GMVEMTSTARTQNTLESDTNRSGRD-------------------------------NILLADRRTKGSRAARYDD--------------GIEGRSGTA------DCYDIDEDHG-----RNSGEQSHQLLSASARSSNVDCVDDGDDRDEAAAFGAGDGRKSNRESFRTTSRA---------LQRFEKAKGFDDRGSGGEGRWGRR-STCWRECLVPIQLLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGR-RRPFPLDYHLAFYLLAL 1341
V GC+SFGLVIGP GGLLA+PATHYP VFSESGLFGR+PYLLPN+VGA IA +GLP VFFFLKET ++ + R DS F L+ E T+ + + +EEG G +EM ++ + + D ++ D + +G+ +AR + +S TA D Y + G RNS A S + G+ G K + + R + F G D + GE + R S WRECLVP++LL E+R R ++ VY +YS LS+ G+ ML FQL+VYP LSKRIG T SQRWACFL+I V+ VFP LS LRG+ LV S+VL F +N A VF NVALATNNAV+PSR TL GLSM GSLAKA GP FFS+IFAWSID RRPFPLDYHL FYLLAL
Sbjct: 210 VTGCSSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETLNLDDGRSVTDSRVGFDLVATPEPSTLLETQDSGMEEGRGGQLEMAPLTQSNSLDDVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRAVVPDSKGRGASSAREKSTGGAINHPSNDRVVALGDKSETARKKIDVDRYGVGNSFGDGGSNRNSSGDRFLQPPREAPSGGASLSSPVGRSEILGLAGSTKGNKGYSQQHPSGRRGHIGDDLGNRVTGFSTEDGSDASCAAGESQIAMRTSAVWRECLVPVRLLEEKRVRAILVVYCIYS--------------------------------VLSLVGVGMLTFQLVVYPWLSKRIGVTGSQRWACFLAILVYAVFPFLSRLRGSGVLLVVGSIVLNFFSNVTATAVFTNVALATNNAVEPSRWATLNGLSMMLGSLAKAVGPAFFSAIFAWSIDDDGRRPFPLDYHLVFYLLAL 695
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: A0A835Z5M2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M2_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.640e-41 Identity = 160/526 (30.42%), Postives = 219/526 (41.63%), Query Frame = 1
Query: 1 VKGCASFGLVIGPGLGGLLAEPATHYPTVFSESGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLPISEAGTVETHEAATVEEGGMVEMTSTARTQNTLESDTNRSGRDNILLADRRTKGSRAARYDDGIEGRSGTADCYDIDEDHGRNSGEQS--HQLLSASARSSNVDCVDDGDDRDEAAAFGAGDGRKSNRESF-----------------RTTSRALQRF----------------------EKAKGFDDRGSGGE---GRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASW-----GTIFSPESIESQAAACVVPA 1431
+ GC S VIGP LGGLLA+P YP VF G F RFPYLLPN + + + L V+F + ET S LLP AA G R T G N + D DD + ++ HG +SG S H L S ++ DG + N S R + A+ F EK +G +G GG+ G G RS + LL+ R V+ VY + S + I E YPLWALST GGLDW IGQ LS+ G+FM FQ LVYP +++ +G R + + IP++ +FP S LR L A + + +N +F ++ L NN+V+ +RG L GL+MT GS AKA GP +++FA+SI G +DYHL F + A+ + V+ AS I SPE+ +++AA A
Sbjct: 98 ITGCWSISFVIGPALGGLLADPCNQYPGVFPRGGAFERFPYLLPNALASIFGVLSLVTVWFMVPET---------SGPRSTLLPS----------AAPAGSSGKNLKYKFQRVATTEGGVAGGGGGSNFTIED---------ADDDALSALPAKHPAVELPRYHGGSSGGSSAQHSLRSVASTXXXXXXXXXXXXXXXXHDGRRLDGMQRNGGSXXXXXXXXXXXXXXXXXXRNGAGAMAPFGRHLSQHGSVRHALLDGSEGDLEKGEGRGQKGDGGDVGGGGAGHRSGV-------LALLSVAPARRVLVVYMVLSLLVIMFDETYPLWALSTQQVGGLDWQPGTIGQVLSMAGVFMALFQFLVYPHVARALGYVRMLKVVSVVVIPLYALFPMCSLLRDRPALLWPAMVCI----KVGSNMIFTSIFLIVNNSVEGDQRGGLNGLAMTAGSAAKAIGPPLGATLFAYSIAGAHSLPLVDYHLTFVVCAVLSIAVAVASHLYFPDDLIKSPETQKAEAATAAAEA 584
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.010e-36 Identity = 140/478 (29.29%), Postives = 218/478 (45.61%), Query Frame = 1
Query: 1 VKGCASFGLVIGPGLGGLLAEPATHYPTVFSESGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGD------SSGEFKLLPISEAGTVETHEAATVEEGGMVEMTSTARTQNTLESDTNRSGRDNILLADRRTKGSRAARYDDGIEGRSGTADCYDIDEDHGRNSGEQSHQLLSASARSSNVDCVDDGDDRDEAAAFGAGDGRKSNRESFRTTSRALQRFEKAKGFDDRGSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSID-GRRRPFP--LDYHLAFYLLALGMVVVSWASWGTIFSPESIESQ 1407
+ G + +VIG G+GGLLA+PA HYPTVFS +GLF +P+LLPN+VGA +++ L V F+L ET+ + R +S + + P + G + TS + N ES + + R+ K A D +G G +Q LS + + +AA DG KS+ + S A Q G +++G G G LL + V+F+ + + +AIG E+YPL+ALST + GGL W++ QIGQ + V G+ + QL+++P K +G T QR C + + FL P L+ + +L + S+V L ++ + ++L + V RG L GL T SL + GP +++ +AWS+ F +DYHL F AL +VVV +W T+ + ES+ S+
Sbjct: 126 ISGTRAISMVIGTGIGGLLAQPALHYPTVFSPTGLFAMYPFLLPNLVGAVLSVFALFLVIFYLPETKDYNKRRFSRDSVRTASTDPRRSPSASPGRSSRKNCGS--------STSAINSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRREKGE-----------------GAPLYQHLSQEPLAGDASFP-------ASAAEKTTDGSKSSTCATDELSAAEQ------GDEEQGLFGPGG----------------LLARPHVKLVLFLGCIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHLVFCASALALVVVGVMAWRTL-TVESLMSE 548
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 152 bits (383), Expect = 2.090e-36 Identity = 127/430 (29.53%), Postives = 183/430 (42.56%), Query Frame = 1
Query: 115 FPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLPISEAGTVETHEAATVEEGGMVEMTSTARTQNTLESDTNRSGRDNILLADRRTKGSR-AARYDDGIEGRSGTADCYDIDEDHGRNSGEQSHQLLSASARSSNVDCVDDGDDRDEAAAFGAGDGRKSNRESFRTTSRALQRFEKAKGFDDRGSGGEGRWGRRSTCWRECLVPIQ---LLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSI---DGRRR-PFPLDYHLAFYLLALGMVVVSWASWGTI 1380
FPYLLPN+VGAG+AL +P VF FL ET LP+ EA V+ TS L + GSR AA + +G T+ + GR H LL+ G+G S+ W + + P LL R ++ VY +Y+F+ G +L+ LWALST GGLDWS++QIGQ L G+ + F+L P ++KR+G T SQR + + V + P L L T L+ AS+ LLF + + + ++ A NNA +P R G + GL+ S+ A GP +S+++A+S+ DGR PFP+D+ LAF+L+A +VV+ SW TI
Sbjct: 129 FPYLLPNLVGAGLALCSIPLVFLFLPET----------------LPVPEAAGVQ--------------FTSLVVPP----------------LGQDKESGSRSAAGGERSNDGSGSTSSTNGTEVSRGR------HSLLAE---------------------------------------------------------GQGECATSSSTWTD-VEPFNRGSLLAAGHVRVLLVVYGIYTFIISGFEDLFALWALSTTPVGGLDWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTISQRLSSITLVFVLPLVPVLGRLPNTGHLLMIASVGLLFTVYSTCDAFYTCISFAINNAAEPERCGEVNGLAACVASVVSAVGPAAWSALYAFSVEFADGRSPFPFPIDFRLAFWLMAFLRLVVAILSWSTI 448
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: D8LFV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV4_ECTSI) HSP 1 Score: 133 bits (335), Expect = 7.590e-32 Identity = 77/217 (35.48%), Postives = 121/217 (55.76%), Query Frame = 1
Query: 730 STCWRECLVPIQ---LLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSID----GRRRPFPLDYHLAFYLLALGMVVVS 1359
S+ W + L P + LL R ++ +Y + F+ G +L+ LWALST +GGL WS++QIGQ L G+ + F+L P ++KR+G T SQR + + V + P L HL L+ AS+ LLF A + ++ NNA +P R G L GL+ S+ GP+ +S+++A+S++ G PFP+D+ LAF+L+A +VV+
Sbjct: 28 SSTWTD-LEPFKRGSLLAAGHVRVLLVIYGICMFIISGFEDLFALWALSTTPAGGLGWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVFVLPLVPVLGHLLNAGHLLMIASVGLLFKIYAPCDAFLTCISFTINNAAEPERCGELNGLAACVASVVSKVGPSAWSTLYAFSVEVTDGGSPFPFPIDFRLAFWLMAFLRLVVA 243
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 137 bits (344), Expect = 7.840e-31 Identity = 126/463 (27.21%), Postives = 187/463 (40.39%), Query Frame = 1
Query: 1 VKGCASFGLVIGPGLGGLLAEPATHYPTVFSESGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLPISEAGTVETHEAATVEEGGMVEMTSTARTQNTLESDTNRSGRDNILLADRRTKGSRAA--RYDDG-IEGRSGTADCYDIDEDHGRNSGEQSHQLLSASARSSNVDCVDDGDDRDEAAAFGAGDGRKSNRESFRTTSRALQRFEKAKGFDDRGSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASWGTI 1380
+ G + +V G +GGLL +P HYP+VFS +GLFGRFP+LLPN+VG G+AL LP V ++ ET+ R S S AR + +A +G + A +DG + + + +++ GR H+ AR V SNRE +G G P LL+ R + ++F+ + + G E++PLWALSTV GGLDW + +IG+ L + G M+ Q+ ++P + K +GA R C L I FL P TL AA + + + N V I +A+A+ + V RG L+GL T S + A +FAWSI P +D+ FY AL + V + +W T+
Sbjct: 102 IDGARASTIVFGSAMGGLLVQPVDHYPSVFSATGLFGRFPFLLPNLVGMGVALLLLPTVIAYVPETKDFEKTRSRSXXXXXXXXXXXXXXX----------XXXXXXXSPARHR---------------AVARHPPQGGKLAYRSLEDGDVSAQQEAQETRGVNDSGGR----AKHKEGGLHAREPPVT---------------------SNREE------------------------QGLCG-----------PGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNHTTLFAALVASVTVANCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSISSDN-PDWVDHRFVFYSSALSLGVATVVAWRTL 478
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Match: A0A6H5JAX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAX4_9PHAE) HSP 1 Score: 131 bits (329), Expect = 1.030e-28 Identity = 131/479 (27.35%), Postives = 185/479 (38.62%), Query Frame = 1
Query: 25 LVIGPGLGGLLAEPATHYPTVFSESGLFGRF-------------PYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLPISEAGTVETHEAATVEEGGMVEMTSTARTQNTLESDTNRSGRDNILLADRRTKGSRAARYDDGIEGRSGTADCYDIDEDHGRNSGEQSHQLLSASARSSNVDCVDDGDDRDEAAAFGAGDGRKSNRESFRTTSRALQRFEKAKGFDDRGSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALYSFVAIGSRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVDPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASWGTIFSPESIESQAAACV 1422
+V G +GGLLA+P HYP+VFS +GLFGRF P+LLPN+VG G AL LP V ++ ET+ NR S L E G V + A E GM + G RA + G++ C E SNRE +G G P LL+ R + ++F+ + + G E++PLWALSTV GGLDW + +IG+ L V G M+ Q+ ++P + K +GA R C L I FL P TL AS+ + + N V I +A+A+ + V RG L+GL T S + A + +FAWSI + +D+ FY AL + V + +W T+ + S + AA V
Sbjct: 173 IVFGSAMGGLLAQPVDHYPSVFSATGLFGRFFSWTPHSHIPSRFPFLLPNLVGMGAALLLLPTVIAYVPETKDFEKNRSRSRFRRSL----EHGDVSAQQGAQ-EPRGMNDS------------------------------GGRAKHKEGGLDA------C--------------------------------------EPPVT-------SNREQ------------------------QGHCG-----------PGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFVSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNYTTLFVASVASVTIVNCSLAAVGIALAVASTDIVSSRLRGKLSGLYGTAESFGRFASAVGSAVLFAWSISSDNLGW-VDHRFVFYSSALALGVATVVAWRTLPAEISGDKPAAENV 529 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12274.1912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12274.1912.1 >prot_Ecto-sp13_S_contig12274.1912.1 ID=prot_Ecto-sp13_S_contig12274.1912.1|Name=mRNA_Ecto-sp13_S_contig12274.1912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=412bp MVEMTSTARTQNTLESDTNRSGRDNILLADRRTKGSRAARYDDGIEGRSGback to top mRNA from alignment at Ecto-sp13_S_contig12274:33..4214+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12274.1912.1 ID=mRNA_Ecto-sp13_S_contig12274.1912.1|Name=mRNA_Ecto-sp13_S_contig12274.1912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4182bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12274:33..4214+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12274:33..4214+ >mRNA_Ecto-sp13_S_contig12274.1912.1 ID=mRNA_Ecto-sp13_S_contig12274.1912.1|Name=mRNA_Ecto-sp13_S_contig12274.1912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12274:33..4214+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |