prot_Ecto-sp13_S_contig7851.19119.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7851.19119.1
Unique Nameprot_Ecto-sp13_S_contig7851.19119.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length363
Homology
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: D8LCT9_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT9_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 3.670e-127
Identity = 191/203 (94.09%), Postives = 196/203 (96.55%), Query Frame = 0
Query:  161 MHESAGFGASADVGRGITPNSSGGRKRQRPGGSPEDNGLGGSEGSPLPRVPLPRGPACVRFEAIDERMASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQNLGLESPLLAGKF 363
            MHESAGFGASADVGRGITP+SSGGRKRQRPG SPEDNGLGGSEGSPLPRVPLPRGPACVRF+AIDERMASTL+YEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPAT TTSG+EGA GK   EAAACGQIEMDGGDPLYLHDWSLPQNLG+ SPLLAGKF
Sbjct:    1 MHESAGFGASADVGRGITPDSSGGRKRQRPGRSPEDNGLGGSEGSPLPRVPLPRGPACVRFQAIDERMASTLSYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATDTTSGQEGA-GKGTGEAAACGQIEMDGGDPLYLHDWSLPQNLGVASPLLAGKF 202          
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: A0A1W0A6P2_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.250e-9
Identity = 41/126 (32.54%), Postives = 64/126 (50.79%), Query Frame = 0
Query:  229 ASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVE--AGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQNL 352
            AS L+Y++F+  YA+R +PV++KGG SL   +   WS E+L+      +K++  +R+V DS+ WARLE+   M L + +   +T T                            LYLHD S+P +L
Sbjct:   85 ASELSYDEFMTEYAMRKQPVIIKGGVSLVLPQNKMWSLESLQTNDAIANKLITTKRYVKDSIHWARLEEGPTMTLSKYIEGLSTITKE--------------------------LYLHDHSIPLHL 184          
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: B3RNT4_TRIAD (JmjC domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RNT4_TRIAD)

HSP 1 Score: 63.2 bits (152), Expect = 2.980e-7
Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 0
Query:  224 IDERMASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQN 351
            I+ R A  L++++F+  YAL+ +PV++    ++C      W+ E ++  AG +   V+R +PDSV WARLE A  M ++  ++                +++  +     ++     LYL DWSLP N
Sbjct:  172 IERRSAKDLSFKEFLSRYALQAKPVIITD--AVCNMISTPWTFEHIKNVAGDRKAAVKRLIPDSVEWARLEIARSMTVKEFVN----------------NMDSPSNFNDEQL-----LYLFDWSLPLN 276          
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: T0S9N9_SAPDV (JmjC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S9N9_SAPDV)

HSP 1 Score: 61.6 bits (148), Expect = 8.820e-7
Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0
Query:  229 ASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAG--HKVVPVRRWVPDSVSWARLEKAGQMPL 301
            A  L+Y+ F+  YAL  RPVVL+GGA L   +   WS  +L   A    K +P +R+V DSV WARLE    MPL
Sbjct:  129 AKDLSYDQFLAEYALPKRPVVLRGGAHLVLTK-KMWSLASLGANAAVASKPMPTKRYVHDSVQWARLEDGPTMPL 202          
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: A0A1V9ZJN2_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJN2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.400e-5
Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 0
Query:  221 FEAIDERMAST----LTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVE--AGHKVVPVRRWVPDSVSWARLEKAGQMPL 301
            FE   E +A T    +   D    YA+  RPVVLKGGA+L       W+  +L+    A  K VP +R++ DSV WARLE+   + L
Sbjct:  115 FETPSEPVAMTAVPVVDVRDLPVEYAMEKRPVVLKGGAALVMPADKMWTLASLQTHPTASLKRVPTKRYIADSVRWARLEEGPVLAL 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCT9_ECTSI3.670e-12794.09JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A1W0A6P2_9STRA1.250e-932.54Dynein heavy chain n=1 Tax=Thraustotheca clavata T... [more]
B3RNT4_TRIAD2.980e-728.91JmjC domain-containing protein n=2 Tax=Trichoplax ... [more]
T0S9N9_SAPDV8.820e-746.67JmjC domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A1V9ZJN2_9STRA8.400e-539.08JmjC domain-containing protein n=1 Tax=Achlya hypo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.650coord: 217..359
e-value: 7.9E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR12480PHOSPHATIDYLSERINE RECEPTORcoord: 219..351
NoneNo IPR availablePANTHERPTHR12480:SF22coord: 219..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7851contigEcto-sp13_S_contig7851:3107..7224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7851.19119.1mRNA_Ecto-sp13_S_contig7851.19119.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7851 3107..7224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7851.19119.1 ID=prot_Ecto-sp13_S_contig7851.19119.1|Name=mRNA_Ecto-sp13_S_contig7851.19119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=363bp
MISSGTFPEIARWWRREKNAARITPQVPQDDDRGFGGTPVSTDPRTLLLG
VTRRTKDGLAFIRGRVRSLRKQLRVDDDPQSRLMLALYLEKMGDDHLEEA
LAEMDVALARMLGRRSANSDNGWSKSERSRLAKAVDSLRMRRRALLEARD
SRPTASPSTAMHESAGFGASADVGRGITPNSSGGRKRQRPGGSPEDNGLG
GSEGSPLPRVPLPRGPACVRFEAIDERMASTLTYEDFIETYALRGRPVVL
KGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMP
LERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQ
NLGLESPLLAGKF
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