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Homology
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: D8LCT9_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT9_ECTSI) HSP 1 Score: 380 bits (975), Expect = 3.670e-127 Identity = 191/203 (94.09%), Postives = 196/203 (96.55%), Query Frame = 1
Query: 481 MHESAGFGASADVGRGITPNSSGGRKRQRPGGSPEDNGLGGSEGSPLPRVPLPRGPACVRFEAIDERMASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQNLGLESPLLAGKF 1089
MHESAGFGASADVGRGITP+SSGGRKRQRPG SPEDNGLGGSEGSPLPRVPLPRGPACVRF+AIDERMASTL+YEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPAT TTSG+EGA GK EAAACGQIEMDGGDPLYLHDWSLPQNLG+ SPLLAGKF
Sbjct: 1 MHESAGFGASADVGRGITPDSSGGRKRQRPGRSPEDNGLGGSEGSPLPRVPLPRGPACVRFQAIDERMASTLSYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATDTTSGQEGA-GKGTGEAAACGQIEMDGGDPLYLHDWSLPQNLGVASPLLAGKF 202
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: A0A1W0A6P2_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P2_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.250e-9 Identity = 41/126 (32.54%), Postives = 64/126 (50.79%), Query Frame = 1
Query: 685 ASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVE--AGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQNL 1056
AS L+Y++F+ YA+R +PV++KGG SL + WS E+L+ +K++ +R+V DS+ WARLE+ M L + + +T T LYLHD S+P +L
Sbjct: 85 ASELSYDEFMTEYAMRKQPVIIKGGVSLVLPQNKMWSLESLQTNDAIANKLITTKRYVKDSIHWARLEEGPTMTLSKYIEGLSTITKE--------------------------LYLHDHSIPLHL 184
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: B3RNT4_TRIAD (JmjC domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RNT4_TRIAD) HSP 1 Score: 63.2 bits (152), Expect = 2.980e-7 Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 670 IDERMASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQN 1053
I+ R A L++++F+ YAL+ +PV++ ++C W+ E ++ AG + V+R +PDSV WARLE A M ++ ++ +++ + ++ LYL DWSLP N
Sbjct: 172 IERRSAKDLSFKEFLSRYALQAKPVIITD--AVCNMISTPWTFEHIKNVAGDRKAAVKRLIPDSVEWARLEIARSMTVKEFVN----------------NMDSPSNFNDEQL-----LYLFDWSLPLN 276
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: T0S9N9_SAPDV (JmjC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S9N9_SAPDV) HSP 1 Score: 61.6 bits (148), Expect = 8.820e-7 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 685 ASTLTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAG--HKVVPVRRWVPDSVSWARLEKAGQMPL 903
A L+Y+ F+ YAL RPVVL+GGA L + WS +L A K +P +R+V DSV WARLE MPL
Sbjct: 129 AKDLSYDQFLAEYALPKRPVVLRGGAHLVLTK-KMWSLASLGANAAVASKPMPTKRYVHDSVQWARLEDGPTMPL 202
BLAST of mRNA_Ecto-sp13_S_contig7851.19119.1 vs. uniprot
Match: A0A1V9ZJN2_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJN2_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 8.400e-5 Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 1
Query: 661 FEAIDERMAST----LTYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVE--AGHKVVPVRRWVPDSVSWARLEKAGQMPL 903
FE E +A T + D YA+ RPVVLKGGA+L W+ +L+ A K VP +R++ DSV WARLE+ + L
Sbjct: 115 FETPSEPVAMTAVPVVDVRDLPVEYAMEKRPVVLKGGAALVMPADKMWTLASLQTHPTASLKRVPTKRYIADSVRWARLEEGPVLAL 201
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 1 |
| Seed ortholog score | 383.3 |
| Seed ortholog evalue | 1.3e-103 |
| Seed eggNOG ortholog | 2880.D8LCT9 |
| Model size | 1089 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| EggNOG free text desc. | Cupin-like domain |
| EggNOG OGs | KOG2131@1,KOG2131@2759 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-07_006870.3 |
| Cds size | 1089 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681464056.2586334-CDS-Ecto-sp13_S_contig7851:3106..3264 | 1681464056.2586334-CDS-Ecto-sp13_S_contig7851:3106..3264 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7851 3107..3264 + |
| 1681464056.2773063-CDS-Ecto-sp13_S_contig7851:4736..4834 | 1681464056.2773063-CDS-Ecto-sp13_S_contig7851:4736..4834 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7851 4737..4834 + |
| 1681464056.287422-CDS-Ecto-sp13_S_contig7851:5336..5418 | 1681464056.287422-CDS-Ecto-sp13_S_contig7851:5336..5418 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7851 5337..5418 + |
| 1681464056.2974997-CDS-Ecto-sp13_S_contig7851:5593..5935 | 1681464056.2974997-CDS-Ecto-sp13_S_contig7851:5593..5935 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7851 5594..5935 + |
| 1681464056.3077924-CDS-Ecto-sp13_S_contig7851:6458..6606 | 1681464056.3077924-CDS-Ecto-sp13_S_contig7851:6458..6606 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7851 6459..6606 + |
| 1681464056.3177748-CDS-Ecto-sp13_S_contig7851:6963..7224 | 1681464056.3177748-CDS-Ecto-sp13_S_contig7851:6963..7224 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7851 6964..7224 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7851.19119.1 >prot_Ecto-sp13_S_contig7851.19119.1 ID=prot_Ecto-sp13_S_contig7851.19119.1|Name=mRNA_Ecto-sp13_S_contig7851.19119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=363bp
MISSGTFPEIARWWRREKNAARITPQVPQDDDRGFGGTPVSTDPRTLLLG VTRRTKDGLAFIRGRVRSLRKQLRVDDDPQSRLMLALYLEKMGDDHLEEA LAEMDVALARMLGRRSANSDNGWSKSERSRLAKAVDSLRMRRRALLEARD SRPTASPSTAMHESAGFGASADVGRGITPNSSGGRKRQRPGGSPEDNGLG GSEGSPLPRVPLPRGPACVRFEAIDERMASTLTYEDFIETYALRGRPVVL KGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMP LERLLSQPATGTTSGREGAAGKSIEEAAACGQIEMDGGDPLYLHDWSLPQ NLGLESPLLAGKF back to topmRNA from alignment at Ecto-sp13_S_contig7851:3107..7224+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig7851.19119.1 ID=mRNA_Ecto-sp13_S_contig7851.19119.1|Name=mRNA_Ecto-sp13_S_contig7851.19119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4118bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7851:3107..7224+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGATCTCGAGCGGTACCTTCCCCGAGATAGCGAGGTGGTGGAGGAGAGA
AAAGAACGCTGCTAGGATAACACCTCAAGTACCCCAGGACGATGATCGTG
GTTTCGGTGGAACGCCAGTGTCAACCGACCCTAGGACTCTCCTGCTTGGC
GTAACCCGGTGAGTGAGTTTTCATTATGTGCAGTACGCACAGTGTGCAGC
TGTGCGGCATATGGAAGCAGCAATGGATTGCACGGGTATGACTTTTCGTT
GAAGCGGCTCCAGGCCCGCAACACTGTGCTTTTTGTGGCGCGCCGATTCT
ATCGGCAGCAACAGGCGGCTAGCAATCTCTTGAAATGAGTGCAGAAGGTG
GATTATCTAACGGTGGATATCAGACTCCCCCCAGAGACAGTTTTATGTGA
AAAATGAGTAAATAATGAAAATATACTGGTGTGGGCCAGGGTGATATGTC
GCTGAGTCGTTTGGGTTGTGGTGTAATTCCCCAACCGTGTGGTGGATGGG
GCGGGGGGTGTGCATTTCCAGGAGGGGCGATAATAACGTCCCTTTGATCT
GAAGCACGTACACAGAGAAATGGATGAACTAAACGCGTTATCGCAAAGCA
AACCTGAGAACAAAAGTATCGGTACTAGAGGCTTGGAATGAACGGGAGCT
CAGCAGCAAGGCAGTTATGGAAAATCCACCAAAAATTCAGCCCTCGTCGA
ACCGCAACGGCTGACTGACCTTCAGCAGATACACATCACCCGCAATTACA
GTGTACAGCAGTGGGACCTCCAGTTCTGGTCGAGGCTGGGGGTTCTTAGT
TACGTAGGTCGCATAGGCTACAAATGACCGCTTGATAGGTTTCGATGTAG
GGTTCTAAACATTCCTCACAAAAAACGCTGGCGTTCTTATGTTATTGGCA
AGCATGAAGTTCTCAAGTGCCTAACTCATGAGTTCGCGCACTGACGGTAG
TGCAAAGCAATTTGTTGCAAGTTGTTGCTTACGGTATGTTTGACAGGATT
CCTTGCTTCAAATCTGGCGGTATAACACAACGTCAGTGGACTCAGCAGCA
CCACCAATCTGAAAGAACGACATCTTGGCCGCAGAAGCCTCACATGGGAG
CCTTGGCATTAACAGCGGCAGGCAGAGGACTATCAGTCGGAGAAAGATAC
AGGAGATTGCGGCTCGGTGCTGTCGTGAGCCACCCCTTCATAAGACGTTT
GGTAGTTCGTCCACCTTAATCCTGCTGTTGGTGCGTGTGGTCAGGTCATA
GCCTGTCACGCTCTCCTCTTACTTTGCACCTGACTCTCTTCCCCATTGGC
TCTGCATGATTCCAAACCAATTTGCGAGCCAAGAATAGGCCAACTGAGTT
TGATGATCTGTTTCTGCCAAAAGAGTTATTCCGTTGCTCTTTCTCGGAGT
GTTTCTGCACTTTAAGTTCAAAGGTGTTGACAAAAATACATTCACATGTT
CACACTTGTCCACACGTGTGCGTGGGACCCCTACACTCTTGTGCCCCGTC
GTCCCCACCCGTCATGTAGTCTTTGCTGTCTATCCGCCTGCTTGTCGTCT
ATCTGTCTGACTGTAGTCTCTCTGGCTGCCTGTCTGTTCGTCTGTCGATC
CGTCCGTCTGTGTGTCAATGCTGGGCGTAGCAGAACCAAGGACGGATTGG
CGTTCATACGGGGGAGGGTACGCAGCCTGCGGAAACAGCTCAGGGTCGAT
GATGATCCGCAGAGCCGACTCATGCTTGGTGAGAGCATGGAACACCGCAG
GAGATGTGTCGGTGGGGACCCATGGTTCGAAAACCAAGATGCTTCAGCTA
TCCCTTACGAATTTGTGCCCGCGTTCGGCTGCTGGAGTAGGTCACTGGGT
CGACCATTTTCCCAAAGCTTGCCGCCAAGACCAGTGTTGCTCATGTGCCG
TCTGCACACTCACAGATCAATCGTGTGGCGTGCCCAGTGCGGTAGGCTTC
AGTTCCCCTCCCATGATGGTGTGCCGGACTATGCACGTGCAGTTGTCTCT
GTTTCCCAGCAGTTGGAAGGATCCGAGAATACTGATGGTGGTTTGGTGTC
TCCCACAAAGTCCCGCAGGGCTCTCTTTGTGTGTGGTAGTACACAGGTTG
CTGCTCCTGCACATTTCAACTGATTCGCAATTGTGTTGGTTCACCCAAAT
AATCGTGAGTCTAGCATTTCCGCGCGAGATCGATGGGGTAGCCCGACGCC
CTTCCCCCCCTGCTCATCCATCCGGTACAGCGCTGTATCTAGAGAAGATG
GGCGATGACCATCTCGAAGAAGCGCTGGCGGAAATGGACGTTGCCTTGGC
GCGAATGCTGGGGTGAGAACAGATTCGTGCATGACTGAGGTACCGCTCGC
GCGGGCATCCTTGACCGTTCTGGAGTGTGGGAAACCAAGGAGGCCTTCCC
CAGGTCAATCATTTCGTATGTTCGGAAACGTCCTATCAATACCCTGACCT
GAATATCATCATACATCCCCGATTCCGACGGTGGCAGGCGTAGAAGCGCC
AACAGCGATAATGGATGGTCTAAGAGTGAGCGTTCGCGGCTAGCGAAAGC
CGTTGATTCTCTTCGAATGCGACGACGTGCCTTGCTGGAAGCGCGAGATT
CACGGCCGACGGCGTCGCCCTCGACCGCGATGCACGAGTCGGCAGGGTTT
GGCGCGTCGGCGGACGTAGGCCGTGGCATCACACCGAACTCAAGCGGCGG
TCGGAAGAGACAGCGTCCGGGGGGATCGCCGGAAGACAATGGCCTCGGCG
GAAGTGAGGGGTCGCCGCTACCGCGGGTGCCGCTACCGCGTGGTCCTGCC
TGTGTGCGTTTCGAGGCTATTGATGAAAGGTAATTGCCCGCTTGAGTCCG
GTATCCGGCAAGTTGAGCACAAGCGTGGCTTGATATCGCAAGGAGGATGC
GACTATTCGAGTCAGGAACGCTTTGCCATGGAAGGGGTTTTGTAGGGACT
GTTCCGTAGTGGAGCCGTCCGGTTATGGCGTACATTTGTTGTTGTCATTA
GTGGGTCAGGTAGTAGCCTGCGCCCTGCGCGATTGGTGTTGGTATCAGCC
CCATATCATCGTGGAAAATCGGCTTCAACCGCTGGGACTTATCTCTGGAG
TATAAACCAGACTCCAATGGCCAGCAGTCATCCGAGGCTTCTTCAGAATA
TCCCTCGCGATACTCGGATAGATATCCCGGGGAGGGACGCAGTCTTCCCT
TGGGCTCATTCCAACGAAAAGTTCAACACTGCCTGGGGGCTACCACAACA
CCTTCCAAACCCTGGGTGCCCGCTTCTGTGGTGACCTCTCCTTGGCGTGT
TTTTGCTCTCGTTTGTGCGGCGCTTGCCTGCTGTTCACATCATTGCACGC
AGAATGGCGTCGACTCTAACCTACGAAGACTTCATCGAGACATACGCGCT
ACGTGGGCGCCCCGTGGTCCTCAAAGGTGGTGCGAGCCTGTGCTTTGAAG
AGGGCAACGCTTGGAGTCGAGAAGCCTTGCGGGTGGAAGCAGGGCACAAG
GTAGCTGTGGTGTATAAAGTGTCGTATCGTACACATATGTAGGACTTGAG
TGAGGGGTTGCTGGCTGAAAAACTCTCTCGCTGGCGAGTGCCAGCTGCTG
CTGTACCGTATGGCCGCCAGTTGTGTGTGCGTGATCCGTCTTGCTCAACG
AAGGGAAGTTGCAGCTTTTGTCTGCTGTGGAGGTTTAATTAATTTTTTTG
GCGTCTATGGCATATTTGTTCGTAGATAGTCGAACAAAGGTCAGCGGCAG
CACAGGAACGCACGCGTTGGCAACCCAATCATATGCTGGGAATGAATACA
TTGCTCGGTGACCTCAGCAGTGTTTTGGATGGCGCCGGGTGACGAATCGC
GGCGCAGGTAGTGCCGGTTCGGCGATGGGTGCCCGACTCAGTCAGCTGGG
CGAGGCTGGAGAAGGCCGGCCAGATGCCACTCGAACGACTCCTTTCGCAA
CCTGCGACGGGCACCACGAGCGGACGAGAAGGCGCTGCTGGGAAAAGCAT
CGAAGAGGCTGCCGCATGCGGTCAAATTGAGATGGACGGGGGCGACCCGT
TGTACCTGCACGATTGGTCCCTTCCGCAGAACCTGGGTCTGGAAAGTCCG
CTCCTGGCGGGGAAATTT back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig7851:3107..7224+ >mRNA_Ecto-sp13_S_contig7851.19119.1 ID=mRNA_Ecto-sp13_S_contig7851.19119.1|Name=mRNA_Ecto-sp13_S_contig7851.19119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1089bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7851:3107..7224+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGATCTCGAGCGGTACCTTCCCCGAGATAGCGAGGTGGTGGAGGAGAGA AAAGAACGCTGCTAGGATAACACCTCAAGTACCCCAGGACGATGATCGTG GTTTCGGTGGAACGCCAGTGTCAACCGACCCTAGGACTCTCCTGCTTGGC GTAACCCGCAGAACCAAGGACGGATTGGCGTTCATACGGGGGAGGGTACG CAGCCTGCGGAAACAGCTCAGGGTCGATGATGATCCGCAGAGCCGACTCA TGCTTGCGCTGTATCTAGAGAAGATGGGCGATGACCATCTCGAAGAAGCG CTGGCGGAAATGGACGTTGCCTTGGCGCGAATGCTGGGGCGTAGAAGCGC CAACAGCGATAATGGATGGTCTAAGAGTGAGCGTTCGCGGCTAGCGAAAG CCGTTGATTCTCTTCGAATGCGACGACGTGCCTTGCTGGAAGCGCGAGAT TCACGGCCGACGGCGTCGCCCTCGACCGCGATGCACGAGTCGGCAGGGTT TGGCGCGTCGGCGGACGTAGGCCGTGGCATCACACCGAACTCAAGCGGCG GTCGGAAGAGACAGCGTCCGGGGGGATCGCCGGAAGACAATGGCCTCGGC GGAAGTGAGGGGTCGCCGCTACCGCGGGTGCCGCTACCGCGTGGTCCTGC CTGTGTGCGTTTCGAGGCTATTGATGAAAGAATGGCGTCGACTCTAACCT ACGAAGACTTCATCGAGACATACGCGCTACGTGGGCGCCCCGTGGTCCTC AAAGGTGGTGCGAGCCTGTGCTTTGAAGAGGGCAACGCTTGGAGTCGAGA AGCCTTGCGGGTGGAAGCAGGGCACAAGGTAGTGCCGGTTCGGCGATGGG TGCCCGACTCAGTCAGCTGGGCGAGGCTGGAGAAGGCCGGCCAGATGCCA CTCGAACGACTCCTTTCGCAACCTGCGACGGGCACCACGAGCGGACGAGA AGGCGCTGCTGGGAAAAGCATCGAAGAGGCTGCCGCATGCGGTCAAATTG AGATGGACGGGGGCGACCCGTTGTACCTGCACGATTGGTCCCTTCCGCAG AACCTGGGTCTGGAAAGTCCGCTCCTGGCGGGGAAATTT back to top
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