mRNA_Ecto-sp13_S_contig785.19115.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A6H5KZ28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ28_9PHAE) HSP 1 Score: 585 bits (1509), Expect = 4.980e-204 Identity = 301/334 (90.12%), Postives = 310/334 (92.81%), Query Frame = 1
Query: 511 MKKRARKVWEGRGRDERAPTVRKPPWLSTTLKLASTAVLVCGPSIGFVVGPAAAFTDTSAFSSLTRRVGDTSTSGSKSSRRRSLLSVKCGTLDPENNVTPANGLVTSSTENLNSEAGGHAREAGLQSEIFAATSGFTTLEAALAGSPFFRNINGGQGEDKDGRREGDLIGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEHGKGVD 1512
MKKRAR+VWEGRGR ERAPTVRKPPWLSTTLKLAS A LVCGPS+GFVVGPAA F DTSA SSLTRRV DTSTSGSKSSRRRSLLSVK G LDP+NNVTPANGLVTSS EN+NS GGHARE GLQSEIFA+TSGFTTLE ALAGS FFR INGG+G DKDGRRE DLIGHFDA+ERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGH+FCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGR ARF GNSDTIGGEKEG C R+DGGFWRLYDLRSGHVSCRIYEEFPPDLFGLE GK VD
Sbjct: 1 MKKRARRVWEGRGRGERAPTVRKPPWLSTTLKLASAAFLVCGPSLGFVVGPAAGFIDTSASSSLTRRVVDTSTSGSKSSRRRSLLSVKSGRLDPKNNVTPANGLVTSSMENMNSGGGGHAREVGLQSEIFASTSGFTTLETALAGSLFFRKINGGRGGDKDGRREEDLIGHFDALERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHVFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFSGNSDTIGGEKEGVCTRDDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEQGKRVD 334
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: D8LJX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX8_ECTSI) HSP 1 Score: 199 bits (506), Expect = 2.920e-57 Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 1
Query: 1210 VVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEHGKGVD 1512
VVHD ACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGR ARFPGNSDTIGGEKEGGC E+GGFWRLYDLRSGHVSCRIYEEFPPDLFGL+ GK VD
Sbjct: 18 VVHDAACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFPGNSDTIGGEKEGGCTGEEGGFWRLYDLRSGHVSCRIYEEFPPDLFGLDQGKRVD 118
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA) HSP 1 Score: 146 bits (368), Expect = 9.620e-36 Identity = 78/160 (48.75%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 1012 LIGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 1491
++ F MERVVLTAN NLQR+ISSYYN+PV V + C G VY+R V +SV G FC AKS+VV+H AC EAV+T VG+GQLF L+ LP F LL+ VG++ P + G G WR+YDL S H+SCRI E+F +LF +
Sbjct: 119 ILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLS----VGQHQPSPSSQTDTGASPTSSIS----GIWRIYDLESKHLSCRIQEKFADNLFDM 270
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A7S2L0C0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L0C0_9STRA) HSP 1 Score: 136 bits (343), Expect = 6.020e-32 Identity = 71/163 (43.56%), Postives = 97/163 (59.51%), Query Frame = 1
Query: 1024 FDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTE-------VGPGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 1491
F A++R+ LTAN NLQR++SS+Y+SPVTV V C E GV+DR V++ V FC A S + VH+P CAE V++G VGLGQLF L+ LP F+LL+AGR E GG WRLY+L+S ++C I+E+F PD++ +
Sbjct: 162 FSALDRIALTANGNLQRIVSSFYDSPVTVVVNSCVERPRLCASENAGVWDRSVDLKVYNKRFCRATSEITVHEPMCAELVRSGEVGLGQLFRYLDKLPTFDLLDAGRT------------------------ESGGMWRLYELKSKELTCSIFEDFSPDVWSM 300
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: W7TDI1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDI1_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.320e-31 Identity = 73/157 (46.50%), Postives = 97/157 (61.78%), Query Frame = 1
Query: 1024 FDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGG--EKEGGCKREDGGFWRLYDLRS-GHVSCRIYEEFPPDLF 1485
F +ERV L+A +LQR+ISSY+NS VTV + C E+ PGV+DREV++SV+GH+FC A S + P CA ++ VGLGQLF L + P F LL+ VGR G + G E+EGG GGFWR+Y+L G ++CRI E F + F
Sbjct: 129 FSPLERVALSAEGDLQRIISSYHNSAVTVRIKRCLEIEPGVFDREVDLSVMGHVFCTATSSLSARTPECAHLLREKSVGLGQLFRHLRVYPTFRLLD----VGRTEVEDGEERDVEGLREREGG-----GGFWRVYELDCPGMINCRILERFSSNTF 276
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A0L0HN02_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN02_SPIPD) HSP 1 Score: 118 bits (296), Expect = 9.880e-27 Identity = 70/166 (42.17%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 1024 FDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGP---------GVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLE 1494
F MER++LTAN N+QR++S+YYNS V+VD+I + V+ REV + L + C AKS V + DP + +VG+GQLF LNILP FELL GR V NS FWR YDLRS V+CRI EEFP +F L+
Sbjct: 50 FSPMERILLTANGNVQRILSAYYNSTVSVDIIHNELINEESASNAETESVFRREVNLRCLNQICCNAKSTVTITDPEYLRLILEQQVGIGQLFRYLNILPEFELLQVGRTV--------NS-----------------FWREYDLRSNGVNCRIREEFPLGVFNLQ 190
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A7S1C1D9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1D9_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.160e-26 Identity = 69/179 (38.55%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 979 GEDKDGRREGDLIGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTE--------VGPGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 1491
GE + RR L+ ++R+ LTAN NLQR++SS+Y++PV+V V+ E V V+DR V + V FC A S+V VHD CA V++G++GLGQLF L+ LP+FEL++AGR R G +D ++G WR Y L + C I EEF D + +
Sbjct: 37 GEGRRSRRRDALVAALSPLDRIALTANGNLQRIVSSFYDAPVSVVVVRNEERASAASRRVPSAVWDRSVALVVHDTTFCRAASVVTVHDAGCAALVRSGKIGLGQLFRHLDRLPKFELVDAGRT--RSIGVDGGAD------------DEGRLWRRYRLWCDELECDILEEFVADTWSI 201
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A1Z5JUV1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUV1_FISSO) HSP 1 Score: 112 bits (281), Expect = 3.380e-25 Identity = 68/163 (41.72%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 1015 IGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCT--EVGPGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEH 1497
G + ++R+VLTAN NLQR+I+SYY++ V+V V C+ + P V+DR V + VLG FC A+S V + +C E V +G+VGLGQLF LN+LP F L AG D I GG WR Y L+ ++C+I EEF P L+ L+H
Sbjct: 28 FGLTNPLDRLVLTANGNLQRLIASYYDADVSVRVEGCSFRQENPRVWDRTVYLEVLGVEFCRAESEVTIQQDSCQELVASGQVGLGQLFRYLNVLPMFFLREAG------------VDPI-----------TGGIWREYTLQCDALTCQIREEFIPGLWELDH 167
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A7S4MCI6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCI6_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.120e-24 Identity = 73/197 (37.06%), Postives = 99/197 (50.25%), Query Frame = 1
Query: 1033 MERVVLTANANLQRVISSYYNSPVTVDVIFC--------------------TEVG-----------------PGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRR------VGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLE 1494
++R+ LTAN NLQR+ SSYY++PV V V C TE G P +DR V +SV G+ FC+A S++ V DP C V +G VG+GQLF L+ LP FEL++AGRR +G+ +G K GG + D G WRLY LR + C I E+F PD + ++
Sbjct: 229 LDRIALTANGNLQRIFSSYYDAPVHVHVERCELRRQALDGAGVVEGSDGGTTEGGGMNGNVCSGDATEGPSPPATWDRTVRLSVHGYAFCIAASVITVRDPECIRLVHSGAVGIGQLFRHLDKLPTFELIDAGRRSSEDVDLGQTEPLEEVKMNLGFGKGGG--QADSGLWRLYALRCEELECIIREDFSPDAWEIQ 423
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Match: A0A0L0FYY7_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FYY7_9EUKA) HSP 1 Score: 110 bits (276), Expect = 8.490e-24 Identity = 65/162 (40.12%), Postives = 85/162 (52.47%), Query Frame = 1
Query: 1009 DLIGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCT-EVGPGVYDREVEISVLGHLFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRYARFPGNSDTIGGEKEGGCKREDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 1491
+L G F +ER+VLTAN LQR+ISSYYN+ VTV + G YDREVE+ + +FC+A S + + + V+ R+GLGQLF LN+LP F LL GR +GG R Y L+S ++CRI E FP LF L
Sbjct: 93 ELPGQFTGLERIVLTANGTLQRIISSYYNAEVTVKIRHNRPRTDQGWYDREVELLIFDQVFCIATSEIHLDRKEYVDLVEINRIGLGQLFRHLNLLPFFHLLKVGRNP------------------------EGGLKRTYTLQSPGITCRITETFPRKLFTL 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig785.19115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig785.19115.1 >prot_Ecto-sp13_S_contig785.19115.1 ID=prot_Ecto-sp13_S_contig785.19115.1|Name=mRNA_Ecto-sp13_S_contig785.19115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=335bp MKKRARKVWEGRGRDERAPTVRKPPWLSTTLKLASTAVLVCGPSIGFVVGback to top mRNA from alignment at Ecto-sp13_S_contig785:9960..15435- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig785.19115.1 ID=mRNA_Ecto-sp13_S_contig785.19115.1|Name=mRNA_Ecto-sp13_S_contig785.19115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5476bp|location=Sequence derived from alignment at Ecto-sp13_S_contig785:9960..15435- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig785:9960..15435- >mRNA_Ecto-sp13_S_contig785.19115.1 ID=mRNA_Ecto-sp13_S_contig785.19115.1|Name=mRNA_Ecto-sp13_S_contig785.19115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1005bp|location=Sequence derived from alignment at Ecto-sp13_S_contig785:9960..15435- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |