prot_Ecto-sp13_S_contig7848.19112.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7848.19112.1
Unique Name	prot_Ecto-sp13_S_contig7848.19112.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	274

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 508 bits (1307), Expect = 1.140e-173
Identity = 256/268 (95.52%), Postives = 260/268 (97.01%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALFAGTYYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAGVEVTVSRRRRLQEETRQEETLAEAAEEVEQEGEMRRLQQELDGGQFCALTVSGGTVSFADPACVPVAP 268
            HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLL+YYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQ YLSALFAGT YQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAGVEV VSRRRRL+EETRQ+ETLAE AEEV QEGEMRRLQQELDGGQ+C L VSGGTVSF DPACVPVAP
Sbjct:  253 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALFAGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAGVEVAVSRRRRLEEETRQDETLAEGAEEVGQEGEMRRLQQELDGGQYCPLAVSGGTVSFKDPACVPVAP 520

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.690e-76
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLET 122
            HADSTWKDIVREDNSTNHVAAYDIDTGE IETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLET
Sbjct:  216 HADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLET 337

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 1.400e-71
Identity = 122/204 (59.80%), Postives = 152/204 (74.51%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYL-SALFAGTYYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAGVEV 203
            HAD+TW D+VR+D ST HVA YD  TGEL++ GTYQG+ + STW+RGQAWAIYG+ MVYR+L EQRFLD +I  L Y+ DNLP+D +P ADFDAP  + DN KDSSA AIV+S L ELF  T +PTYL K+Q +L S L + TY+   ATDG+Q+ILR +   WGDE   +G+V  DYF LE+MVRY+ +APSIIL  EA V +
Sbjct:  129 HADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDE--AVGSVTADYFLLESMVRYKTMAPSIILRNEAEVSI 329

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 2.170e-69
Identity = 119/205 (58.05%), Postives = 154/205 (75.12%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALF-AGTYYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAGVEVT 204
            HAD+TW D+VRED ST HVA YD  TG+L + GTYQG+ + STW+RGQAWA+YG+AMV+R+L ++RFLDRSI  L Y+ DNLP+D +P ADFDAPE++ DN KDSSA AIV+S L ELF  T +PTYL K+Q +LS+L  + TY+   ATDG+Q++LR +   WG++   +G+V GDYF LE MVRY+ +APSIIL  E     T
Sbjct:  129 HADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENS-DNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDS--VGSVTGDYFLLEAMVRYKTMAPSIILRDEEEASTT 330

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 1.850e-66
Identity = 115/205 (56.10%), Postives = 148/205 (72.20%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALFAG-TYYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAGVEVT 204
            HAD+TW D+VR+D ST HVA Y+  TGEL++ GTYQG+ + STW+RGQAWAIYG+ MV+R+L + RFLD  I  L Y+ DNLP+D +P ADFDAP  + DN KDSSA AIV+S L ELF +T +P+YL K Q +LS+L     Y+   ATDG+Q+ILR +   WGD    +G+V  DYF LE+MVRYQ ++PSIIL  E  V +T
Sbjct:  187 HADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGD--AAVGSVTADYFLLESMVRYQTMSPSIILRNETEVSIT 388

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: D7FUK3_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK3_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.540e-54
Identity = 96/173 (55.49%), Postives = 123/173 (71.10%), Query Frame = 0

Query:   33 GTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYL-SALFAGTYYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAGVEVT 204
            GTYQG+ + STW+RGQAWAIYG+ MV+R+L EQRFLD +I  L Y+ DNLP+D +P ADFD P  + DN  DSSA AIV+S L ELF  T +P+YL K+Q +L S L + TY+   ATDG+Q+ILR +   WGD    +G V  DYF LE++VRY+ +APSIIL  EA   +T
Sbjct:    6 GTYQGWQDDSTWSRGQAWAIYGFTMVHRYLTEQRFLDYTINTLSYFIDNLPDDNVPYADFDDPVDS-DNPNDSSATAIVTSALFELFELTGEPSYLEKAQEFLPSLLLSSTYFDSSATDGWQTILRNSTAAWGD--AAMGFVTADYFLLESIVRYKTMAPSIILRDEADASIT 175

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 162 bits (409), Expect = 1.540e-43
Identity = 87/194 (44.85%), Postives = 127/194 (65.46%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPE---DLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALFAGTYYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAP 191
            HAD TW+  VRE+ ST HV +Y   +GE+++  T+QG+   STW+RGQAW++Y YAM YR+   +R L+RSI   +Y+ ++  +   DL+P +DFDAP    DN +DSSA AIV+S L+EL+  T+   YL  +Q  L++L    Y   D  + YQSIL +   +WG+   E+G +FGDYFF+E + R+Q+ AP
Sbjct:  216 HADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPID-DDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASLSTPKYLAMD--NNYQSILLKGSEKWGEP--EVGTIFGDYFFIEALYRWQQWAP 403

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 157 bits (397), Expect = 7.810e-42
Identity = 85/194 (43.81%), Postives = 126/194 (64.95%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLP---EDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALFAGTYYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAP 191
            HAD TW+  +R++ ST HV  Y +D G++++  T+QG+   STW+RGQAW++Y YAM YR+   +R L+RSI   +Y+ +      +D IP ADFDAP     N +DSSA AIV+S LLEL+  T +  YLV +++ L++L    +   D    YQSIL +   +WG+E  E+G +FGDYFF+E + R+Q+ +P
Sbjct:  210 HADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDK-NPRDSSATAIVASALLELYKITNEEKYLVDAESMLTSLATPEFLAMDPE--YQSILLKGSEKWGEE--EVGTIFGDYFFIEALYRWQQWSP 397

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.500e-41
Identity = 86/183 (46.99%), Postives = 117/183 (63.93%), Query Frame = 0

Query:   33 GTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALF-AGTYYQPDATDGYQSILRRAMREWGDEDGEIGAV----------FGDYFFLETMVRYQKLAPSIILWQEAGVEVT 204
            G YQG+ + STW+RGQAWA+YG+ MV+R+L +QRFL+ +I  L Y+ D+LP+D +P ADFDAP  + DN KDSS  AIV+S LLELF    +P+YL K+Q +LS+L  + TY+   ATDG+Q+ILR +   WGDE   +G                F +   VRY  +APS+IL  E    +T
Sbjct:  118 GAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFLEYAINTLSYFIDSLPDDNVPYADFDAPVDS-DNPKDSSVTAIVTSALLELFELIGEPSYLEKAQEFLSSLLLSSTYFDSLATDGWQAILRNSAPAWGDE--AVGPSPRTTFSWNRWVSGIFNIAEQVRYMTMAPSMILRDEVEASIT 297

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BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Match: A0A4Y7ZV10_9GAMM (Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZV10_9GAMM)

HSP 1 Score: 155 bits (391), Expect = 7.480e-41
Identity = 87/192 (45.31%), Postives = 125/192 (65.10%), Query Frame = 0

Query:    1 HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPE---DLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALFAGTYY--QPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQ 187
            HAD TW + VRE+ ST HV +Y+   G++++  T+QG+   STW+RGQAWA+Y YAM YR+    R L+RS    +YY +   +   DL+P ADFDAP    DN +DSSAAAIV+S L+EL+  T++  YL  +Q  L++L   TY    PD    Y+SIL +   +WG+   E+G++FGDYFF+E + R++
Sbjct:  222 HADKTWANNVRENGSTYHVVSYNSQ-GQVVKKRTHQGWKTESTWSRGQAWAVYAYAMYYRYTGLDRMLERSKKSYQYYLEATKKQTNDLVPYADFDAPLDK-DNPRDSSAAAIVASALIELYKITKEEQYLNDAQAMLNSLATPTYLANNPD----YESILLKGSEKWGEP--EVGSIFGDYFFVEALYRWK 405

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7848.19112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KCI0_9PHAE	1.140e-173	95.52	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D8LHN8_ECTSI	1.690e-76	99.18	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
A0A6H5JQV0_9PHAE	1.400e-71	59.80	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7FQV4_ECTSI	2.170e-69	58.05	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
D7FUJ9_ECTSI	1.850e-66	56.10	Unsaturated glucuronyl hydrolase, family GH88 n=3 ...	[more]
D7FUK3_ECTSI	1.540e-54	55.49	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
R9PSV9_AGAAL	1.540e-43	44.85	Putative unsaturated glucuronyl hydrolase n=4 Tax=...	[more]
UPI00200F5605	7.810e-42	43.81	glycoside hydrolase family 88 protein n=1 Tax=Agar...	[more]
A0A6H5JQR3_9PHAE	1.500e-41	46.99	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A4Y7ZV10_9GAMM	7.480e-41	45.31	Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 208..231
None	No IPR available	PANTHER	PTHR36845	FAMILY NOT NAMED	coord: 1..189
IPR010905	Glycosyl hydrolase, family 88	PFAM	PF07470	Glyco_hydro_88	coord: 18..188 e-value: 5.2E-10 score: 38.9
IPR012341	Six-hairpin glycosidase-like superfamily	GENE3D	1.50.10.10		coord: 1..198 e-value: 8.5E-57 score: 194.7
IPR008928	Six-hairpin glycosidase superfamily	SUPERFAMILY	48208	Six-hairpin glycosidases	coord: 1..190

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7848	contig	Ecto-sp13_S_contig7848:496..4748 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7848.19112.1	mRNA_Ecto-sp13_S_contig7848.19112.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7848 496..4748 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7848.19112.1 ID=prot_Ecto-sp13_S_contig7848.19112.1|Name=mRNA_Ecto-sp13_S_contig7848.19112.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
HADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAW
AIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATD
NGKDSSAAAIVSSGLLELFLETEDPTYLVKSQNYLSALFAGTYYQPDATD
GYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKLAPSIILWQEAG
VEVTVSRRRRLQEETRQEETLAEAAEEVEQEGEMRRLQQELDGGQFCALT
VSGGTVSFADPACVPVAPVRYKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010905	Glyco_hydro_88
IPR012341	6hp_glycosidase-like_sf
IPR008928	6-hairpin_glycosidase_sf