mRNA_Ecto-sp13_S_contig78430.19104.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: D7FN20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN20_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.040e-45 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1
Query: 4 RYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRV 240
RYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAV+RELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRV
Sbjct: 85 RYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVIRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRV 163
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: A0A6H5L628_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L628_9PHAE) HSP 1 Score: 122 bits (305), Expect = 3.820e-31 Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 1
Query: 61 MLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRV 240
MLVVGERGHQPSATVWNLATGAVVREL GGHRFGIGCI FTPSGGGV+TMGFKHDRMLRV
Sbjct: 1 MLVVGERGHQPSATVWNLATGAVVRELVGGHRFGIGCILFTPSGGGVITMGFKHDRMLRV 60
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: A0A835ZC14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC14_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.580e-30 Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 1
Query: 4 RYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRV 240
RYFRA KTVSCLAFSRDG ML VGERGH PS VW LATG V+ EL GGH++G+ C++F+P G +V++GFK+DRML+V
Sbjct: 270 RYFRAGKTVSCLAFSRDGSMLAVGERGHLPSVIVWKLATGVVLAELKGGHKYGVACLAFSPQGNALVSVGFKYDRMLQV 348
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: A0A6G0X4Q9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4Q9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.260e-14 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 4 RYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRV 240
RY+R KTVS +AFS DG ++ + E+GH PS TVW++ TG + E H++GI ++F+ +V+MGF HD+ML V
Sbjct: 53 RYYRVEKTVSAVAFSLDGTLIAIAEKGHSPSITVWSVETGQLKAEFKR-HKYGIVSLAFSADTQYLVSMGFVHDKMLYV 130
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: UPI00139019F1 (mitogen-activated protein kinase-binding protein 1-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00139019F1) HSP 1 Score: 73.9 bits (180), Expect = 2.050e-14 Identity = 32/77 (41.56%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 22 KTVSCLAFSRDGGMLVVGERGHQPSATVWNLA--TGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRVRN 246
KT++ +AFSRDG L GE GH PS VW++ T V E+A GH+ G+ C++F+P+ +V++G++HD ++ + N
Sbjct: 7 KTITAVAFSRDGKYLATGESGHLPSVRVWSMEDPTNPQVSEMAKGHKHGVACVAFSPNLKYLVSVGYQHDMLINIWN 83
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: A7RJA6_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RJA6_NEMVE) HSP 1 Score: 73.9 bits (180), Expect = 1.350e-13 Identity = 32/77 (41.56%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 22 KTVSCLAFSRDGGMLVVGERGHQPSATVWNLA--TGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRVRN 246
KT++ +AFSRDG L GE GH PS VW++ T V E+A GH+ G+ C++F+P+ +V++G++HD ++ + N
Sbjct: 7 KTITAVAFSRDGKYLATGESGHLPSVRVWSMEDPTNPQVSEMAKGHKHGVACVAFSPNLKYLVSVGYQHDMLINIWN 83
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: A0A7J7MFD5_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MFD5_9MAGN) HSP 1 Score: 70.5 bits (171), Expect = 2.520e-12 Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 13 RASKTVSCLA-FSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHD 225
R K +SC+A SRDGG + GE GHQP+ VW+ ++ ++ EL H+FG+ CISF+P G +V++G+ HD
Sbjct: 69 RMPKPLSCVAVLSRDGGFIAAGESGHQPAVLVWDYSSRTLLCELKV-HQFGVTCISFSPDGKHLVSVGYPHD 139
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: A0A485LJ37_9STRA (Aste57867_21552 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ37_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.530e-12 Identity = 31/77 (40.26%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 4 RYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRML 234
RY+R + VS +AFS DG +L + E+GH+PS TVW++ TG + E H++G+ ++F+ +V++GF D+ML
Sbjct: 54 RYYRVERAVSAVAFSPDGKLLAIAEKGHEPSITVWDVETGQLKAEFKK-HKYGVVALAFSADARYLVSVGFVFDKML 129
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: V4BSL8_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BSL8_LOTGI) HSP 1 Score: 70.1 bits (170), Expect = 3.380e-12 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 22 KTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRMLRVRN 246
KT++ LAFS+DG LV GE GH P+ VW++ + V E G H F + C++F P+ +V++G +HD+M+ V N
Sbjct: 54 KTITALAFSKDGKHLVTGEAGHLPAVRVWDVEEKSQVAEFHG-HNFRVNCVAFFPNSKYIVSIGSQHDKMVNVWN 127
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Match: A0A397BB06_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BB06_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.330e-12 Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 4 RYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGHRFGIGCISFTPSGGGVVTMGFKHDRML 234
RY+R K VS +AFS DG +L + E+G PS TVW++ TG + E H++G+ ++F+ +V+MG HD+ML
Sbjct: 54 RYYRVEKPVSSIAFSVDGALLAIAEKGQAPSITVWDVETGQLKAEFKR-HKYGVIAMAFSADSRFLVSMGLVHDKML 129 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78430.19104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig78430.19104.1 >prot_Ecto-sp13_S_contig78430.19104.1 ID=prot_Ecto-sp13_S_contig78430.19104.1|Name=mRNA_Ecto-sp13_S_contig78430.19104.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp KRYFRASKTVSCLAFSRDGGMLVVGERGHQPSATVWNLATGAVVRELAGGback to top mRNA from alignment at Ecto-sp13_S_contig78430:94..339- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig78430.19104.1 ID=mRNA_Ecto-sp13_S_contig78430.19104.1|Name=mRNA_Ecto-sp13_S_contig78430.19104.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=246bp|location=Sequence derived from alignment at Ecto-sp13_S_contig78430:94..339- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig78430:94..339- >mRNA_Ecto-sp13_S_contig78430.19104.1 ID=mRNA_Ecto-sp13_S_contig78430.19104.1|Name=mRNA_Ecto-sp13_S_contig78430.19104.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=246bp|location=Sequence derived from alignment at Ecto-sp13_S_contig78430:94..339- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |